ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399800 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◣ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
TMCO2
NOTCH2NLC
NOTCH2
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
PRRC2B
RPH3A
RLF
ARHGEF2
MRPL45
RPS29
RABL2B
HPCAL4
TRMT1
NACC1
NOTCH2NLB
NOTCH2NLA
TTC24
IQGAP3
NT5C1A
CDK7
DUX4
PRKACB
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
MFSD2A
PPM1K
QTRT1
NUF2
CCBE1
PPBP
PF4
ATP8B1
GCNT2
MAMDC2
MPP3
CD300LG
TRAPPC6A
BLOC1S3
DHX37
BRI3BP
POLR3D
CCDC102B
ITPRIPL1
NCAPH
UTP25
C12orf66
DIAPH3
SCOC
BMP8B
WDR7
ATP6V0D1
AGRP
NBN
MOK
FAM72C
FAM72A
ADAT1
ZP4
NEMF
PSME3
BECN1
KCNJ14
GRWD1
PAX9
RTTN
MTFR2
HSPA12A
ENO4
SPG21
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
CKB
MAB21L2
RRP15
COX8C
C16orf71
ANKS3
HEATR1
NR2E1
BIRC5
DZIP3
CIP2A
NAXE
GPATCH4
WDR74
STX5
ZNF24
ATP2C2
WDR4
AP1S1
PUM3
NBPF1
FAM72D
TIMM21
FBXO15
SLF2
HAUS1
ATP5F1A
FRG2C
SPATA25
CTSA
NEURL2
ZSWIM1
CDC20
ELOVL1
CORO2A
CFAP299
BLM
METAP1D
TMX3
EXO1
ACVR1
PHB2
FANCI
RIOK3
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
FGF14
UFD1
CDC45
KIF23
RBKS
BABAM2
URB1
TCF4
SCFD2
KPNA2
UNG
ALKBH2
ARL4D
CALML3
KIF2C
ZGRF1
LARP7
LYPLAL1
LRRC53
SMYD5
PNO1
RTN4RL1
DPH1
COMMD6
UCHL3
UTP4
DERPC
CHTF8
METTL11B
TMEM241
AURKB
CEMIP
MOCS2
TRABD2B
MIS18A
TICRR
LYPD6B
CDT1
APRT
KATNAL2
DMAC1
MAGI1
TTK
WWP2
NOB1
C15orf39
LYRM4
FARS2
SLC38A8
PLEKHD1
RBM19
EDC3
FAM200B
AEN
IFNG
DDX31
GTF3C4
RD3
CKAP2L
TRAPPC8
NOL6
VPS4B
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
HDHD2
EEF1AKMT3
METTL1
CYP27B1
TOM1
WDR26
ZNF77
POU2F1
NEK2
TTC27
CD46
TFB2M
CNST
CCT2
NPC1
SLC25A17
CENPS-CORT
CENPS
CFAP53
CCNA2
PRR3
GNL1
GNG14
FBXW9
GNA12
MZT1
BORA
RPRD1A
PRLHR
CORO1A
ARMC2
COMMD4
TAF13
AIP
NUDT2
KIF24
RBBP8
CKS2
SECISBP2
CYP21A2
TNXB
RNF125
USP37
CNOT9
CCNG2
TMEM186
PMM2
TRAPPC2L
GALNS
FOXB1
RTN3
ATL3
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
VPS33A
EPHX1
DSEL
COL9A2
HEXA
RDH5
ITGA7
BLOC1S1
MYDGF
IKBKB
USP2
KIAA0895
ANLN
TAF4B
MRPL11
PPP1R3B
GBA
CDH2
FAAP24
CEP89
KAT5
RNASEH2C
PIK3C3
PPP1R10
MRPS18B
ATAT1
GUSB
TIMELESS
MIP
KIF22
AP1B1
STAM2
MRPS33
MCM10
TBC1D4
MRM3
GLOD4
CCDC86
RPS3A
WASHC5
NSMCE2
DDX5
CEP95
POLG2
PEX19
SLC35D1
RETNLB
NTAQ1
CLSPN
STK36
RNF25
CYB5R1
ADIPOR1
PCCA
ZNF558
MCRS1
TFAP2A
VPS41
ZNF408
ARHGAP1
RIPPLY2
CYB5R4
TIMM9
KIAA0586
E2F3
TROAP
BCAS3
FAM183A
FAM72B
CCNB1
SH3KBP1
RNF138
PMVK
PMS2
AIMP2
POLR1B
WDR61
DPH2
ATP6V0B
B4GALT2
SUMO2
CRISPLD1
G2E3
C4B_2
C4B
ADPGK
SLC39A6
ELP2
LRATD2
CDK18
DCUN1D2
SLC12A9
CLK3
ZNF778
RBL2
TMEM262
ZFPL1
CDCA5
H1-2
H3C3
TOMM70
LNP1
NKX2-8
C16orf46
NAT10
POLR2J2
ADSL
HNRNPU
LETMD1
MPP1
QTRT2
CCDC191
ESCO2
CCDC25
POLQ
SUGP2
ARMC6
RFX5
VPS26B
NCAPD3
RFWD3
YOD1
PFKFB2
HUS1
NME7
BLZF1
RPS27L
DDX19A
INTS9
HMBOX1
RMC1
TRIP4
PCLAF
METTL18
C1orf112
CYTH1
PTPRD
FNIP2
SHC1
MRPL27
EME1
FLAD1
CKS1B
PDP2
CLYBL
C6orf89
SPG7
HROB
STK11IP
TBC1D16
CCDC40
NEDD4L
ZAP70
MYO5B
PBK
MAK16
SMC2
CXXC1
MBD1
MTRNR2L2
MSH3
DHFR
POLR2G
TAF6L
NOL10
NOC3L
PTPN4
SFXN2
ARL3
DNAAF4
CENPH
CDC25B
VPS11
KIAA0513
NCMAP
CLN5
DHODH
PKD1L3
ING5
HSPBP1
BRSK1
WDR3
GDAP2
UPF3A
DIS3
TDO2
RPTOR
KIF18B
RPUSD4
FAM118B
CCDC146
TAF1A
PROS1
ARL13B
DLGAP5
ZBTB37
USP35
KCTD21
TAF12
TFIP11
FAM161B
COQ6
ASPM
EBNA1BP2
CFAP57
WDR18
GLE1
RAB7A
VTI1B
DCUN1D1
DIRAS2
DAOA
GPX4
POLR2E
PDE4B
GGT6
MYBBP1A
CHRNA9
CSNK2A3
EFCAB6
PSEN2
KIAA2026
ERCC5
IKBIP
APAF1
PIF1
LEMD3
DDHD1
PSMD9
HPD
RNF187
NUP35
VLDLR
SPNS1
LAT
ZNF358
MCOLN1
PWP1
ZNF594
GEMIN6
MYLK3
CCDC39
PDE4DIP
KNL1
SF3A3
SGO2
MRPS28
F11R
THADA
STAP2
MPND
ZNF598
PIPOX
NPW
HASPIN
SCRN3
CIR1
TXNL4B
DHX38
RCL1
UQCRC2
ESPL1
RPL17-C18orf32
RPL17
COMMD5
C18orf32
MFSD1
IPO11
DIMT1
CCDC32
RPUSD2
DDX11
FKBP1A
KIF14
FHL3
UTP11
TBC1D30
RPP40
PACRGL
GNS
CMC2
CENPN
CRYBG3
LHFPL1
RFC1
PPIH
RIOK1
CAGE1
PRPF38A
ORC1
GAR1
GTSE1
ALKBH8
PPIB
SASS6
POLN
HAUS3
PISD
CASP7
CALHM4
ARHGEF38
DHX40
RRP12
LACTB
ERCC3
RDX
RASL11B
ARID3B
TM9SF1
IPO4
MTR
MRPL24
TSSK4
TTC23L
TAF1C
ADAD2
CNDP2
BCL9
RGS8
P3H3
GNB3
TXLNA
LRRC29
VAC14
DYRK1B
KLHDC4
DYRK3
IER3IP1
TEKT2
ADPRS
WDPCP
PRCP
DDIAS
MDH1
STYXL1
MDH2
SMG5
TMEM79
ISG20
NOP9
DHRS1
TSACC
CCT3
MND1
DRD4
SP4
USF1
TSTD1
MTURN
ZNF396
DHDDS
TRUB2
COQ4
SPCS1
GLT8D1
ZSCAN30
SRD5A1
NSUN2
SWSAP1
EPOR
ADHFE1
RRS1
CHST12
TOP3A
SMCR8
LRRC73
YIPF3
POLR1C
LZTS2
TWNK
MRPL43
THAP11
GCSH
SMAD2
PIGU
POP7
ACADM
FLRT2
DGKB
MELK
MCM5
TMEM132D
IREB2
PDE11A
RNF166
CTU2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
MAFK
RPF2
ZNF202
COQ9
CIAPIN1
SPATA4
SSUH2
SRA1
SLC35A4
APBB3
NYAP1
RANBP6
TRAF5
GATB
ING1
CARS2
AP2S1
CNPY3
NPL
PDE8A
ANAPC7
ZEB2
MAP11
GAL3ST4
WDHD1
SOCS4
PACSIN3
ARFGAP2
NEMP1
LAMTOR4
CEP295
SSR2
ZNF587
LRRN3
GRAMD2A
C21orf58
PCNT
TMEM9B
CCNB2
RNH1
ENOX2
SNRPA
C19orf54
PDCD2L
EHMT1
BTBD8
CDIP1
TTF2
MDN1
CASP8AP2
RNF40
CCDC189
MED20
BYSL
MAPRE2
UBE2C
ATP6V0A1
NUP107
PFDN6
RGL2
WDR46
FAM98B
LMNA
MEX3A
TMEM260
SENP7
CRELD2
ALG12
GALNT1
STAT1
TRMT6
MCM8
NIP7
COG8
PDF
INPP5K
BAZ1B
FAM234B
POLR2J3
NSFL1C
RAB36
RSPH14
INO80
PIK3CA
SOCS3
ABHD4
DAD1
ST8SIA3
TNNI3K
DNMT3B
WDR62
THAP8
TMEM234
EIF3I
DPP4
SLC14A1
KXD1
E2F6
FBXW8
ACOX3
SLF1
KIAA0825
TMED5
CCDC18
PRIM2
ABHD3
ZSCAN29
TUBGCP4
SCG5
GPATCH3
ATF3
GPN2
XRN2
STOML2
PYCR3
GFUS
POLR2K
PIGO
FBXO43
SV2A
MTMR11
PPP1R14D
PARP9
DTX3L
SF3B4
PARD3
ZIC5
UBE2Q1
CHRNB2
ZNF276
VPS9D1
EIF3C
EIF3CL
SLC7A6OS
PRMT7
FCF1
AREL1
SLC25A10
MRPL12
DTX2
NCKAP5L
SNX19
EXOSC5
BCKDHA
ACTR6
SERP1
EIF2A
RSPH3
SZT2
MED8
NUDT1
MRM2
CFDP1
MAD1L1
DOLPP1
ORC2
SMYD3
RCCD1
ACYP1
ZC2HC1C
PFDN2
NIT1
VPS35
SLC35A3
ZWILCH
SNAPC5
RPL4
SDE2
KIZ
OLFM3
SOX21
LRP2BP
SLC35B2
ANKRD37
HSP90AB1
INO80C
NFKBIE
C18orf21
FAM189B
SCAMP3
GINS3
DENR
ARL2BP
CEP128
ICAM3
RAVER1
GOLPH3L
NAGPA
CENPP
GPR107
CEP162
CDK5RAP3
NCAPH2
LMF2
MRM1
DHRS11
TPGS2
LSM1
BAG4
CHAC1
FBL
PHLPP2
MBOAT2
NR1H2
POLD1
S100A13
S100A1
CHTOP
RTF1
GNL2
BRCA1
ZNF33A
EIF3D
TTC5
TMEM178A
AGBL4
C6orf47
APOM
BAG6
PPIL1
TK1
AFMID
PCID2
CUL4A
SF3A1
CCDC157
RASAL2
HEG1
MLN
SLC38A7
RIT1
IBA57
PRR5L
COMMD9
VPS72
PIP5K1A
VPS45
COG2
PPP1R12B
GPN1
CCDC121
TMEM250
PYGO2
PBXIP1
LOC101928120
EIF2AK1
WDR5B
PTCD2
MRPS27
ZNF721
PIGG
NUDT9
DDX19B
AARS1
CEP126
ANGPTL5
MUL1
PLK4
DYNLL1
TIGD4
ARFIP1
HNRNPH2
GLA
DNAH14
MVD
BCL7A
SPATA2
DPY19L4
LTV1
PLS1
PTRHD1
CENPO
ZNF473
VRK3
MTHFR
CLCN6
TTI1
RPRD1B
SMIM5
RBM7
C11orf71
DBF4B
EXOC1
SPATA33
ASH1L
PIM3
ZCCHC14
NIF3L1
PPIL3
NOLC1
MOV10L1
OGDH
GTF2H3
EIF2B1
DUS2
DPEP2NB
DDX28
EXOSC3
SPAG1
GINS1
USP36
ABCA3
CFAP206
KLHL20
KLF1
GCDH
DNASE2
EIF2B3
NASP
MRPS18C
HELQ
POLD3
CYB5A
THAP5
DNAJB9
ASB8
ZZEF1
CYB5D2
PSMB4
LAP3
NCOA7
TIPRL
SRP54
TTC39C
MYO19
PIGW
GGNBP2
NOM1
VPS8
CEP43
FUBP3
LMAN1
EPYC
NAGK
MYO1G
RECQL
GOLT1B
URB2
TAF5L
RAB5B
PMEL
CDK2
SMC4
IFT80
MCF2L
SNAP47