ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374678 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◣ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

H2BC17
H2AC17
OR2B2
DUX4
GSTA4
TMEM107
BORCS6
FRG2C
LOC102724770
DGCR6
ARL4D
H4C8
MCRIP2
METTL26
WFIKKN1
CCDC107
ARHGEF39
SIT1
LAMP1
FBXO31
MAP1LC3B
FCGR3A
RAB11A
PARP16
HSPA6
NDUFS7
BCAR3
CCDC200
UBC
BRMS1
B4GAT1
LASP1
DNAJB4
MPZL1
RNASE4
ANG
LUC7L2
FMC1-LUC7L2
FMC1
SACM1L
MYNN
ACTRT3
ALOXE3
HES7
PCGF2
PSMB3
PRMT5
KMT5B
ZBED9
ELF1
WBP4
DCT
MAMDC2
TRIM7
RS1
PPEF1
PLXDC1
MED16
PSMA3
OR1F1
ZNF184
H2BC5
H1-4
RDH5
ITGA7
BLOC1S1
EAPP
H2BC21
H2AC21
H2AC20
H1-2
H3C3
NPR1
ILF2
TRIM41
TMEM259
CNN2
NKX1-1
ZFP36
PLEKHG2
H4C12
H4C11
H2BC15
H2AC15
VPS33A
H2BC14
H2AC14
FCHSD2
H4C3
H1-6
H3C6
H4C6
H1-3
POLR3E
OR6S1
H3C13
H2BC18
MDM4
H2BC3
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C2
H2AC4
H3C2
H4C1
ZNF839
H2BC11
H2AC11
H4C9
H3C1
H1-1
WDR74
STX5
H4C15
FCGR3B
KNL1
LTA4H
SMARCC2
TAF12
PTPN6
C12orf57
HMGN4
C8orf37
DPP9
NCOA7
ACTB
TIA1
PCYOX1
SHF
POLG
C17orf97
RNASET2
H4C13
H3C11
H1-5
H2AC16
MTRNR2L1
FRG2
PRSS16
TRMO
H3C8
H2BC10
SPRTN
EXOC8
ZBTB4
SLC35G6
POLR2A
H2BC8
H2AC8
SRSF7
XRCC5
H3C7
H2BC9
H4C7
RPL12
LRSAM1
WASHC2A
SLCO5A1
SNX16
NBN
POLDIP3
H2AC12
H2BC12
ANXA2
HNRNPA2B1
CBX3
CLP1
VAMP2
ZDHHC5
H4-16
H2AJ
WASF2
GBA
MARCHF8
KCNC3
CCDC115
IMP4
TLX2
PCGF1
LBX2
COG6
POM121L2
BCLAF1
ZNF285
CTDP1
HEXA
H2BC4
H2AC6
POLR3B
RPLP0
GCN1
MICU2
PARP2
CCNB1IP1
SRSF6
HMGA1
UBE2S
DDX3X
PIH1D1
ALDH16A1
TRA2B
SIRT4
H3C4
H2AC7
H4C5
H2BC7
GTF2A1
CBWD5
CBWD3
CBWD6
SNRPB
SMIM11B
SMIM11A
NARF
CYBC1
H3C12
C6orf62
IL4I1
ATF5
NUP62
INO80C
EIF4A3
SNRNP70
CALM1
POLR2J3
TMEM238
TMEM190
RPL28
RPL5
TXN2
H3C10
H2BC13
H2AC13
DNAJC25-GNG10
DNAJC25
CRCP
CKS2
SECISBP2
POLE4
HDAC4
H4C4
H2BC6
EXOSC9
TMEM242
TSSK4
MDP1
CHMP4A
LIG4
ABHD13
FSCN1
ZSCAN30
SGF29
SRFBP1
GSK3B
MRPS14
UNK
H3-3B
FUS
CCDC106
U2AF2
COMMD4
MIS12
DERL2
CASC3
PCIF1
NEMF
RPS5
MLH3
FTL
UQCC2
STARD7
POMZP3
CLSPN
PAXBP1
HAGH
FAHD1
COMMD1
CCT4
CBWD1
AARS2
KLF7
LZTR1
ZNF706
ING1
CARS2
DNAJB1
MRPL54
APBA3
RAX2
NUDT15
TUBA1B
CTSO
SBNO1
SHCBP1
EIF4A2
CYP4F11
EIF3A
WASHC2C
RPS29
ZNHIT2
MRPL49
FAU
TM7SF2
H2AX
HMBS
DPAGT1
TRAF7
RAB26
TMSB4X
TK2
CKLF-CMTM1
CKLF
HMOX1
KMT2E
EXD1
CHP1
RPP25L
DCTN3
C12orf65
MAT2A
GNG14
POC5
MRPL17
NCOA5
DHPS
ZNF567
STX10
IER2
SUMF1
CYP20A1
CDKN1A
NAGK
SPAAR
HRCT1
ANKRD26
SLC9A1
STAT6
S100A13
S100A1
CHTOP
IFRD1
SREK1
SLC3A2
RPP38
ACBD7
CDK11B
CDK11A
CD74
HYLS1
PHRF1
PUS7
C6orf226
RINT1
RPS3A
USP42
SETX
RCCD1
SRSF3
KNTC1
MRPS16
DNAJC9
INTS5
GANAB
XRN2
C2CD5
LOC100287896
LIPT2
DEPDC1B
STK35
PNKD
FAM71E1
EMC10
GPBAR1
AAMP
STX3
PPP2R3B
GABARAP
ELP5
CTDNEP1
PHF23
DVL2
MCRS1
B2M
ZNF335
DGKH
NAT10
TFRC
ZNF518A
RITA1
DDX54
TSR3
GNPTG
TPCN1
TECR
RCE1
IQCD
C6orf47
APOM
BAG6
DENND6A
GOLM2
POU2F1
EIF3L
ANKRD54
EIF3D
ABHD4
DAD1
CLASRP
NOL10
TCAIM
MAGOHB
LSM4
PTMA
EEF2
C17orf75
ZNF207
PXK
COX18
SUCO
ING5
LEO1
PAPLN
SYCE2
BRD2
PREB
PRR30
XRCC2
ZNFX1
SPTAN1
EHD1
GBE1
MTHFD2
SEH1L
VRK2
FAM133B
KIF2C
H2BU1
H2AW
BRPF1
WDR11
GTF3A
TMEM175
GAK
SPATA25
CTSA
NEURL2
ZSWIM1
ZNF721
PIGG
MRPL2
KLC4
CUL7
NPRL3
ZNF720
RIPK1
RAB13
EXOSC8
ALG5
RPS27
RPS9
TSEN34
PSPC1
DAGLB
MAP2K7
SLTM
CALM2
WDR62
THAP8
RBM39
CIPC
EIF3B
WDR5B
ATF4
TBCA
PCNA
TMEM230
CDS2
EMC4
PPIA
ZNF507
PPP1R12A
ZC3H10
RPL41
SMIM10L1
PRH1-TAS2R14
PRH1
ACAD9
SDCBP2
PPP1R35
ZCWPW1
MEPCE
CAP1
NCAPD2
MRPL51
SPRED1
NBEAL2
CCDC12
STS
PUDP
ASF1B
PDE7A
TSPOAP1
RPL10
NASP
CSE1L
PLGRKT
SRSF10
OR2V2
YBEY
MCM3AP
RPF1
VHL
SMARCE1
DUS3L
PRR22
ERAP1
CLCN7
DENR
RAD23A
CALR
FARSA
NFYC
LENG8
TIMM13
UBE2M
CHMP2A
PRKRIP1
BLOC1S4
MRFAP1L1
RAD50
IGFBP4
SPECC1L
ZFAT
ZAR1L
BRCA2
SRSF5
RPL3
UBE3A
FRG1
MTHFD1
ZNF770
MYPOP
AZIN1
TMEM114
P4HA1
GPR137
AP2S1
ARHGAP35
MTR
NUDCD2
HMMR
MRPL53
MOGS
CPNE8
MED15
ZFP69B
HIF1AN
NDUFB8
CLK1
PTBP3
TANGO6
POLR2B
NOA1
E2F6
UBP1
TUBGCP5
MRPL48
PPAN-P2RY11
PPAN
P2RY11
EPM2A
EIF3G
MIS18A
TTI2
SMC1A
RIBC1
GARS1
ARPC1A
DUSP1
VPS26C
GSTT4
CABIN1
ATN1
MYO19
PIGW
GGNBP2
SLC25A28
ALKBH5
HLA-DQA1
PLEC
KDM8
CNOT11
MICOS10-NBL1
MICOS10
UCKL1
LRP2BP
ANKRD37
ARHGDIA
VCP
FANCG
P4HB
QTRT2
CCDC191
SAP30BP
RECQL5
AP3B1
YDJC
CCDC116
BRAP
ACAD10
ZNF644
RPL13A
RPS11
TMX1
GPATCH3
GPN2
TMBIM4
FANCL
NUP214
LANCL2
IFNAR1
CR2
AP1M1
CCNT1
SPPL2A
TIMM21
FBXO15
METAP1D
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
GSN
RAB14
TDRD7
XKR7
NOTCH2NLC
IQSEC3
MTRNR2L8
ZNF77
CPLX2
CAMTA1
NOTCH2
NOTCH2NLB
SMIM17
LMLN2
NOTCH2NLA
LIN28A
NBPF1
IFT46
ARCN1
ZNF555
KIF5C
PDE4DIP
CEBPE
ARID3B
INSM2
ART1
GAS8
SSBP1
NUF2
RIPPLY2
CYB5R4
UTP20
MUC3A
STAT1
PRRC2B
FAM24A
SRA1
SLC35A4
APBB3
RRP15
NME1
KXD1
CRNKL1
CFAP61
RBM48
PEX1
FANCD2
LPIN1
SERPIND1
RAB42
TMEM101
UTP25
PSMD9
HPD
TIPARP
ZMPSTE24
KCTD18
TRMT1
NACC1
ATP6V0D1
AGRP
NAGPA
RNF187
AFAP1
AHCY
CRBN
TTC26
PPT1
YJU2
KCNH7
RAB37
POLR3H
TMEM248
SEPTIN9
TMCO2
TRIP4
PCLAF
HPCA
IBA57
QTRT1
OSCAR
NDUFA3
PDE6D
COPS7B
STX16
RBM19
RPS19
DLGAP3
SCFD2
MTFR2
EXO1
USP35
KCTD21
SPNS1
ZCCHC7
TTLL4
WASHC5
NSMCE2
NOS3
DHDDS
TATDN3
NSL1
CELSR3
NEK2
BARHL1
EEF1AKMT3
RTBDN
MAST1
EIF2D
ZEB1
LAT
SLX1B
SLX1A
BOLA2B
BOLA2
BHLHA15
UBFD1
EARS2
TMEM120A
USP30
TIGAR
DBNL
SNAP25
PRR14
FBRS
SULT1A4
SULT1A3
ITGB3BP
EFCAB7
SLC39A3
BCL7B
TTC24
IQGAP3
RABL2B
NR1H2
PWWP2A
KAT5
STX18
RBBP5
RBM8A
MARCHF4
TDRKH
KIF3B
METTL1
CYP27B1
TMEM262
IDH3B
DCUN1D2
SPDYE14
SPDYE10P
NAGS
UBE2H
PDXK
ZNF23
VPS50
HEPACAM2
SMG8
BNIP3L
DHRS3
ZNF581
ZNF580
CCNG2
CENPP
SUPT7L
SOD2
SLC4A1AP
DYNC2I1
RNASEH2C
PYY
FAM227B
DTWD1
FAM72C
PDE4A
TM9SF1
IPO4
TIMM17A
LMOD1
SPATA2
TPH2
EPHA10
GPR107
RAP1GAP
DCLRE1B
AP4B1
NBPF15
CHGB
COMMD2
RHEBL1
NFE2L2
CDK7
NOL8
SARS1
GATB
LARP1
WDR4
BOLA2-SMG1P6
DNMT3B
PHC2
RABGEF1
SPOP
SEBOX
RABGAP1L
BIRC5
MTF2
FAM228B
PPIL2
SF3A3
HMGB1
UBE2L3
HIBADH
SVOP
EPN1
ZC3H18
JUNB
PSME3
BECN1
WTAP
PXN
COX6A1
CRYBG1
RFC1
SLC45A4
SLC12A9
TRUB2
COQ4
RBM28
THAP9
SEC31A
ITPRIPL1
PRR5L
DNAJC5
C6orf89
RFX1
COQ8A
POLR3F
DZANK1
DHX40
CPPED1
CDT1
N6AMT1
EIF1AD
CST6
BANF1
KLHL18
KIF9
MRM3
GLOD4
PI16
APRT
ATG9B
NCAPH
TEN1
CADM3
ACOX1
GTF3C3
C2orf66
SHC1
PDE1C
NDUFS3
KBTBD4
PAFAH2
RTTN
ARL17B
TRIT1
TP53I3
SF3B6
WDR36
KYAT1
RTN4
NUP107
RIMBP3B
ZNF852
TXLNA
HOOK2
STAM2
FNBP1
VIM
CBLL1
CDK5RAP1
MFSD1
RTN3
NRL
COMMD9
METTL25
CCDC59
FAM180B
WBP1
CCDC88A
MRPL27
EME1
CDC14B
DRG2
YARS1
S100PBP
ATL3
KDM3A
USP2
CCDC77
RNF181
SLC25A51
PSEN2
NSUN4
PFDN4
EBAG9
ABCB8
OLFML2A
UNC45B
NLE1
FHL3
RIMBP3C
SMYD5
RTF2
TTC31
CCDC142
ATF3
COL23A1
IL1R1
L1CAM
POLD1
BIRC2
FAM72A
TRIAP1
INTS12
GSTCD
KLHL22
BCAS3
GTF2H4
LIMS1
ATR
ASF1A
BAIAP2
VTA1
NMBR
FAM72D
C12orf66
YTHDF2
UBE2Q1
CHRNB2
ALAD
HDAC2
COASY
NEIL3
MAPK8IP2
CRKL
ZNF684
BHLHE40
RRP12
VARS2
ZNF764
PEX3
ADAT2
PLEKHM3
RGS3
UTP11
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SPG21
USPL1
FLAD1
CKS1B
MTRNR2L9
TSFM