ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9779520 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◣ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
TMCO2
NOTCH2NLC
NOTCH2
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
PRRC2B
RPH3A
RLF
ARHGEF2
RABL2B
MRPL45
HPCAL4
TRMT1
NACC1
NOTCH2NLB
NOTCH2NLA
RPS29
TTC24
IQGAP3
NT5C1A
CDK7
PRKACB
MYCL
SSH2
CRNKL1
CFAP61
SHCBP1
MFSD2A
PPM1K
RAD51
QTRT1
CCBE1
ATP8B1
NUF2
NEMF
PPBP
PF4
DUX4
MAMDC2
TRAPPC6A
BLOC1S3
GCNT2
DHX37
BRI3BP
POLR3D
CCDC102B
MPP3
CD300LG
UTP25
ITPRIPL1
NCAPH
C12orf66
DIAPH3
SCOC
WDR7
BMP8B
ATP6V0D1
AGRP
NBN
MOK
ADAT1
ZP4
FAM72C
FAM72D
PSME3
BECN1
KCNJ14
GRWD1
PAX9
HSPA12A
ENO4
MTFR2
SPG21
PMAIP1
RTTN
LAMP1
MAB21L2
TRMT61A
CKB
RRP15
SEMA3C
COX8C
SPACA1
C16orf71
ANKS3
HEATR1
NR2E1
DZIP3
CIP2A
NAXE
GPATCH4
WDR74
STX5
WDR4
BIRC5
AP1S1
ATP2C2
TIMM21
FBXO15
ZNF24
SLF2
SPATA25
CTSA
NEURL2
ZSWIM1
HAUS1
ATP5F1A
NBPF1
CDC20
ELOVL1
CORO2A
CFAP299
BLM
PUM3
TMX3
EXO1
ACVR1
PHB2
RIOK3
CDC16
FANCI
ZCCHC7
METAP1D
SRCAP
LOC730183
FBXO5
FGF14
UFD1
CDC45
KIF23
RBKS
BABAM2
TCF4
URB1
KPNA2
ARL4D
UNG
ALKBH2
KIF2C
ZGRF1
LARP7
CALML3
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
LYPLAL1
COMMD6
UCHL3
METTL11B
SMYD5
RTN4RL1
DPH1
SCFD2
TRABD2B
TICRR
CEMIP
MOCS2
FAM72A
DMAC1
LYPD6B
CDT1
APRT
MIS18A
AURKB
MAGI1
LRRC53
C4B_2
C4B
TTK
LYRM4
FARS2
TNXB
C15orf39
PLEKHD1
FRG2C
PNO1
SLC38A8
RBM19
FAM200B
TMEM241
UTP4
DERPC
CHTF8
DDX31
EDC3
GTF3C4
RD3
IFNG
VPS4B
CKAP2L
TRAPPC8
KATNAL2
HDHD2
EEF1AKMT3
METTL1
CYP27B1
NOL6
WWP2
NOB1
ZNF77
TOM1
AEN
NEK2
TTC27
TFB2M
CNST
CD46
NPC1
POU2F1
CCT2
WDR26
CFAP53
CCNA2
CENPS-CORT
CENPS
PRR3
GNL1
GNG14
FBXW9
GNA12
RPRD1A
MZT1
BORA
PRLHR
NUDT2
KIF24
ARMC2
AIP
SLC25A17
CKS2
SECISBP2
TAF13
RNF125
CCNG2
TMEM186
PMM2
USP37
CNOT9
RDH5
COMMD4
ITGA7
BLOC1S1
TRAPPC2L
GALNS
VPS33A
RTN3
ATL3
NKX2-1
CEP135
MRPL1
PPP1R3B
DSEL
HEXA
RBBP8
MYDGF
EPHX1
TAF4B
IKBKB
KIAA0895
ANLN
MRPL11
POLR2J2
CDH2
FOXB1
GBA
FAAP24
CEP89
KAT5
RNASEH2C
LRRC49
THAP10
PPP1R10
MRPS18B
ATAT1
TIMELESS
MIP
PIK3C3
KIF22
MRM3
GLOD4
AP1B1
STAM2
CCDC86
CORO1A
TBC1D4
COL9A2
USP2
RPS3A
RETNLB
WASHC5
NSMCE2
MCM10
PEX19
DDX5
CEP95
POLG2
CYB5R1
ADIPOR1
SLC35D1
NTAQ1
CLSPN
STK36
RNF25
PCCA
TFAP2A
ZNF558
ZNF408
ARHGAP1
MCRS1
TROAP
VPS41
RIPPLY2
CYB5R4
E2F3
GUSB
FAM183A
SH3KBP1
BCAS3
CCNB1
CYP21A2
RNF138
MRPS33
PMVK
FAM72B
POLR1B
DPH2
ATP6V0B
B4GALT2
SUMO2
CRISPLD1
ADPGK
SLC39A6
ELP2
DCUN1D2
LRATD2
CDK18
TIMM9
KIAA0586
H1-2
H3C3
TOMM70
LNP1
RBL2
G2E3
NKX2-8
TMEM262
SLC12A9
ZFPL1
CDCA5
ZNF778
ADSL
C16orf46
POLQ
YOD1
PFKFB2
ESCO2
CCDC25
RFX5
LETMD1
VPS26B
NCAPD3
QTRT2
CCDC191
PMS2
AIMP2
WDR61
HUS1
INTS9
HMBOX1
SUGP2
ARMC6
PDP2
NME7
BLZF1
RMC1
TRIP4
PCLAF
CYTH1
PTPRD
SHC1
FLAD1
CKS1B
CLK3
RPS27L
METTL18
C1orf112
FNIP2
CLYBL
MRPL27
EME1
DDX19A
SPG7
MAK16
STK11IP
TBC1D16
CCDC40
MYO5B
C6orf89
HNRNPU
NEDD4L
NAT10
PBK
NOC3L
SMC2
CXXC1
MBD1
POLR2G
NOL10
TAF6L
CENPH
MPP1
CDC25B
DNAAF4
KIAA0513
NCMAP
RFWD3
WDR3
GDAP2
TDO2
KIF18B
VPS11
ING5
HSPBP1
BRSK1
DLGAP5
DIS3
DHODH
PKD1L3
TAF1A
PROS1
ARL13B
RPUSD4
FAM118B
ZBTB37
RPTOR
TFIP11
WDR18
FAM161B
COQ6
HROB
ASPM
ZAP70
DAOA
CCDC146
USP35
KCTD21
EBNA1BP2
CFAP57
DIRAS2
GLE1
PDE4B
CSNK2A3
EFCAB6
DCUN1D1
DDHD1
MTRNR2L2
MSH3
DHFR
PSMD9
HPD
PSEN2
PTPN4
KIAA2026
IKBIP
APAF1
PIF1
GGT6
UPF3A
MYBBP1A
CHRNA9
GPX4
SFXN2
ARL3
POLR2E
LEMD3
SPNS1
LAT
NUP35
ZNF358
SGO2
MCOLN1
GEMIN6
CLN5
MYLK3
VLDLR
RNF187
PWP1
CCDC39
PIPOX
HASPIN
KNL1
SF3A3
MRPS28
F11R
STAP2
MPND
RAB7A
SCRN3
CIR1
TXNL4B
DHX38
DRD4
FHL3
UTP11
IPO11
DIMT1
THADA
FKBP1A
ESPL1
KIF14
RPL17-C18orf32
RPL17
COMMD5
C18orf32
MFSD1
CCDC32
PACRGL
RPUSD2
CMC2
CENPN
LACTB
LHFPL1
TAF12
RFC1
PPIH
RIOK1
CAGE1
ERCC5
GAR1
PPIB
VTI1B
RRP12
SASS6
POLN
HAUS3
PRPF38A
ORC1
GTSE1
ALKBH8
CALHM4
TM9SF1
IPO4
PISD
TSSK4
RDX
RASL11B
P3H3
ARHGEF38
GNB3
DHX40
MRPL24
CNDP2
ARID3B
LRRC29
MTR
DYRK1B
ZNF594
RGS8
PDE4DIP
TXLNA
PRCP
DDIAS
STYXL1
MDH2
VAC14
DDX11
NOP9
DHRS1
ZNF598
TAF1C
ADAD2
NPW
DYRK3
ERCC3
IER3IP1
DHDDS
TEKT2
ADPRS
RCL1
SMG5
TMEM79
ISG20
THAP11
SP4
USF1
TSTD1
TRUB2
COQ4
SWSAP1
EPOR
CHST12
TOP3A
SMCR8
LRRC73
SPCS1
GLT8D1
ZSCAN30
YIPF3
POLR1C
ACADM
SRD5A1
NSUN2
MND1
SMAD2
TMEM132D
PIGU
TBC1D30
GNS
UQCRC2
LZTS2
TWNK
MRPL43
FLRT2
DGKB
MELK
MCM5
CRYBG3
PDE11A
RNF166
CTU2
MAFK
ZNF202
TSACC
CCT3
SPATA4
IREB2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
RANBP6
WDHD1
SOCS4
POP7
RPF2
COQ9
CIAPIN1
TRAF5
RPP40
CNPY3
NEMP1
BCL9
ANAPC7
PDCD2L
ZEB2
GATB
ING1
CARS2
NYAP1
AP2S1
CASP7
PDE8A
CEP295
PACSIN3
ARFGAP2
TMEM9B
MTURN
BTBD8
GRAMD2A
MDN1
C21orf58
CASP8AP2
PCNT
TTC23L
CCNB2
ATP6V0A1
SNRPA
C19orf54
ZNF396
LRRN3
WDPCP
MDH1
LMNA
CDIP1
RNF40
CCDC189
MAPRE2
KLHDC4
UBE2C
RNH1
MEX3A
SSR2
ENOX2
CRELD2
ALG12
ZNF587
FAM98B
TTF2
RAB36
RSPH14
BAZ1B
FAM234B
GCSH
GALNT1
STAT1
NUP107
PFDN6
RGL2
WDR46
ADHFE1
RRS1
INPP5K
TMEM260
SENP7
EHMT1
CBWD5
CBWD3
CBWD6
NIP7
COG8
PDF
SOCS3
ST8SIA3
KXD1
DNMT3B
NSFL1C
PIK3CA
TMEM234
EIF3I
SSUH2
FBXW8
XRN2
PYCR3
GFUS
NPL
SLF1
KIAA0825
INO80
ZSCAN29
TUBGCP4
SLC14A1
SRA1
SLC35A4
APBB3
GPATCH3
ATF3
E2F6
GPN2
WDR62
THAP8
STOML2
PIGO
PRIM2
ABHD4
DAD1
PARP9
DTX3L
ABHD3
PARD3
ZIC5
SCG5
ZNF276
VPS9D1
ACOX3
TMED5
CCDC18
SV2A
MTMR11
PPP1R14D
SNX19
SF3B4
UBE2Q1
CHRNB2
ACTR6
MAP11
GAL3ST4
SLC7A6OS
PRMT7
FCF1
AREL1
NUDT1
MRM2
MAD1L1
ORC2
SMYD3
LAMTOR4
POLR2J3
SERP1
EIF2A
SLC35A3
RSPH3
SZT2
MED8
ZWILCH
SNAPC5
RPL4
SLC25A10
CFDP1
MRPL12
DOLPP1
KIZ
RCCD1
ACYP1
ZC2HC1C
OLFM3
SOX21
TNNI3K
LRP2BP
EXOSC5
BCKDHA
SLC35B2
ANKRD37
HSP90AB1
VPS35
NFKBIE
FAM189B
SCAMP3
SDE2
GINS3
ARL2BP
CEP128
ICAM3
RAVER1
GOLPH3L
PHLPP2
NR1H2
CENPP
POLD1
C18orf21
GNL2
MED20
BYSL
NCAPH2
LMF2
DENR
MLN
CHAC1
NAGPA
GPR107
TRMT6
MCM8
INO80C
CEP162
CDK5RAP3
BRCA1
ZNF33A
MRM1
DHRS11
TPGS2
LSM1
BAG4
FBL
MBOAT2
TMEM178A
AGBL4
OR2T34
GPN1
CCDC121
RTF1
TK1
AFMID
EIF3D
IBA57
PRR5L
COMMD9
C6orf47
APOM
VPS45
COG2
BAG6
PPIL1
RASAL2
SLC38A7
WDR5B
DPP4
VPS72
PIP5K1A
PLS1
PTRHD1
CENPO
PPP1R12B
POLR2K
DDX19B
AARS1
TMEM250
FBXO43
CEP126
ANGPTL5
MUL1
PLK4
DYNLL1
SF3A1
CCDC157
TIGD4
ARFIP1
PYGO2
PBXIP1
LOC101928120
PTCD2
MRPS27
DNAH14
MVD
MAGEA2B
MAGEA2
CSAG3
SPATA2
H4C14
H3C15
H3C14
H2AC19
H2AC18
LTV1
ZNF721
PIGG
NUDT9
SMIM5
SPATA33
HNRNPH2
GLA
PIM3
DPY19L4
GTF2H3
EIF2B1
ZCCHC14
ZNF473
VRK3
MTHFR
CLCN6
TTI1
RPRD1B
NOLC1
RBM7
C11orf71
TTC5
NCKAP5L
PFDN2
NIT1
EXOSC3
SPAG1
DBF4B
CFAP206
LAP3
OGDH
KLHL20
KLF1
GCDH
DNASE2
DUS2
DPEP2NB
DDX28
NIF3L1
PPIL3
CYB5A
GINS1
THAP5
DNAJB9
ABCA3
MYO19
PIGW
GGNBP2
PSMB4
NASP
MRPS18C
HELQ
POLD3
SRP54
USP36
TTC39C
NOM1
ZNF701
NAGK
NCOA7
MYO1G
RECQL
GOLT1B
URB2
TAF5L
SMC4
IFT80
PCID2
CUL4A
SNAP47
JMJD4
ZZEF1
CYB5D2
VPS8
CEP43
ASH1L
FUBP3
LMAN1
ADCY7
EPYC
ZBED1
DHRSX
H4C15
CFAP54