ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116423 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◣ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

KIF5C
NPAS4
HTR5A
DUX4
MTRNR2L2
MSH3
DHFR
LIN28A
WDR74
STX5
EPN1
RBM48
PEX1
LMLN2
CEBPE
MAMDC2
CCDC200
PPP1R35
ZCWPW1
MEPCE
PTPRN2
INSM2
MTRNR2L8
IQSEC3
MTRNR2L1
NKX1-1
FAM24A
NBPF1
NUP214
XKR7
MUC3A
RIPPLY2
CYB5R4
TMEM101
NAGS
PYY
ZCCHC7
NAGPA
PDE4A
NOS3
SPOP
EPHA10
PDE1C
DIO1
IBA57
CELSR3
XKR9
LACTB2
RGPD2
RGPD1
NPPB
CCNP
TTC9B
SMIM17
NGB
DLGAP3
ZC3H18
RTBDN
MAST1
GET3
TJP3
KCNH7
GPATCH3
GPN2
DPF1
CRBN
LPIN1
CACNG3
GBA
UBE2O
AANAT
RNF187
ZNF335
SMG8
EMILIN2
SCG3
RAP1GAP
SPNS1
LAT
CPPED1
NACAD
DRD2
TMEM204
EIF2D
LCN8
LCN15
LCN6
DPH2
ATP6V0B
HPCA
RBM19
DIABLO
CELF6
ART1
ADAMTS14
CEACAM16
RTN3
ATL3
CA4
DOCK6
NCLN
S1PR4
TMED1
SLC44A2
B3GNT3
FOXA3
SYMPK
FRG2C
NUF2
SUMF1
DHX40
PICK1
PKD2L2
FRG2
ANK1
PRG3
CPLX2
PRAME
UTP25
MICAL3
OSCAR
NDUFA3
RFC1
UBE3B
KCTD10
TTC26
KLHL18
KIF9
TRMO
MTRNR2L9
TCIRG1
NDUFS8
UBE2L3
UTP20
PAFAH2
CAPN2
P2RX6
EBI3
UBL5
PIN1
NBPF3
SYT11
GON4L
TNNI3
DNAAF3
KPNB1
NSUN5
METAP1D
CRKL
NFIC
TYMS
TYMSOS
RXRA
TIGAR
CDK5RAP3
QTRT1
UNC45B
NLE1
ERCC1
ZDHHC24
ACTN3
CELF3
IQSEC1
PPM1F
PTPRH
SYNJ2
SETD1A
ORAI3
RIPOR1
PPP1R7
PASK
HEXA
SPTAN1
GPR107
CADM3
FNBP1
LSR
STEAP1B
FHL3
UTP11
COL23A1
SFSWAP
FCHO1
ZNF23
THAP7
DNAJC11
NRCAM
RAB42
UFD1
CDC45
CHGB
ZNF280D
TOP3B
SMARCD2
KANK2
TRIP4
PCLAF
POLD3
NDST1
PDE4C
DNAJC18
TRMT1
NACC1
PRKCSH
CCDC151
RAB36
RSPH14
AP3B2
PRRC2B
MEGF9
VPS37C
CALB1
PPIL2
SST
UBE2H
N6AMT1
SOGA1
PHRF1
ZC3HC1
SLC29A3
VPS50
HEPACAM2
PUS7
TSPOAP1
BARHL1
COASY
MLX
HSD17B1
PDE4DIP
HAGH
FAHD1
RFX1
EIF3H
LCLAT1
GAS8
MRPL40
HIRA
TIMM10
SMTNL1
PDXK
CENPS-CORT
CENPS
TTC7A
MCFD2
MKNK2
TASOR
SARS1
CCDC69
ADGRB2
KLHL22
TAS1R3
DVL1
TSEN54
CASKIN2
LLGL2
MARCHF8
VPS37D
PRR5L
COMMD9
RPS13
LOC102724770
DGCR6
ARL4D
GSN
RAB14
TDRD7
NOTCH2NLC
ZNF77
CAMTA1
NOTCH2
NOTCH2NLB
NOTCH2NLA
SNX16
IFT46
ARCN1
ZNF555
ARID3B
EAPP
SSBP1
POLR2J3
STAT1
PAXBP1
SRA1
SLC35A4
APBB3
RRP15
NDUFS7
NME1
TMEM242
WASHC2C
KXD1
CRNKL1
CFAP61
FANCD2
CCDC107
ARHGEF39
SERPIND1
PSMD9
HPD
TIPARP
VPS33A
ZMPSTE24
KCTD18
SPATA25
CTSA
SIT1
ATP6V0D1
AGRP
AFAP1
NEURL2
AHCY
LAMP1
PPT1
CDKN1A
YJU2
RAB37
POLR3H
TMEM248
SEPTIN9
POLG
TMCO2
WASHC2A
PDE6D
COPS7B
STX16
GSTA4
RPS19
ZSWIM1
SCFD2
MTFR2
EXO1
USP35
KCTD21
P4HA1
TTLL4
WASHC5
NSMCE2
RAD23A
CALR
DHDDS
TATDN3
NSL1
NEK2
EEF1AKMT3
ZEB1
SLX1B
SLX1A
BOLA2B
BOLA2
BHLHA15
CCDC106
UBFD1
EARS2
TMEM120A
USP30
DBNL
SNAP25
PRR14
FBRS
FARSA
SULT1A4
SULT1A3
ITGB3BP
EFCAB7
SLC39A3
BCL7B
U2AF2
TTC24
IQGAP3
RABL2B
NR1H2
PWWP2A
KAT5
STX18
RBBP5
RBM8A
MARCHF4
TDRKH
KIF3B
METTL1
CYP27B1
TMEM262
IDH3B
DCUN1D2
SPDYE14
SPDYE10P
RPS29
UBC
KNL1
BNIP3L
DHRS3
ZNF581
ZNF580
CCNG2
CENPP
SUPT7L
SOD2
SLC4A1AP
DYNC2I1
RNASEH2C
FAM227B
DTWD1
FAM72C
BCAR3
TM9SF1
IPO4
TIMM17A
LMOD1
SPATA2
TPH2
TAF12
H4C8
DCLRE1B
AP4B1
NBPF15
COMMD2
RHEBL1
NFE2L2
CDK7
NOL8
GATB
LARP1
WDR4
BOLA2-SMG1P6
DNMT3B
CASC3
PCIF1
PHC2
RABGEF1
SEBOX
RABGAP1L
BIRC5
LUC7L2
MTF2
FAM228B
SF3A3
CLP1
HMGB1
HIBADH
SVOP
JUNB
PSME3
BECN1
WTAP
RDH5
PXN
MPZL1
CBWD5
COX6A1
CRYBG1
SLC45A4
SLC12A9
TRUB2
COQ4
RBM28
H4C14
H3C15
H3C14
THAP9
SEC31A
ITPRIPL1
DNAJC5
C6orf89
COQ8A
COMMD4
POLR3F
DZANK1
CDT1
EIF1AD
CST6
BANF1
MRM3
GLOD4
PI16
APRT
ATG9B
CBWD3
NCAPH
ITGA7
BLOC1S1
TEN1
ACOX1
GTF3C3
C2orf66
SHC1
MRPL48
NDUFS3
KBTBD4
BRMS1
RTTN
ARL17B
TRIT1
TP53I3
SF3B6
WDR36
KYAT1
RTN4
NUP107
RIMBP3B
ZNF852
TXLNA
HOOK2
STAM2
VIM
CBLL1
CDK5RAP1
MFSD1
NRL
H2BC17
H2AC17
MIS18A
PCNA
METTL25
CCDC59
FAM180B
WBP1
CCDC88A
MRPL27
EME1
CDC14B
DUS3L
CAP1
DRG2
YARS1
S100PBP
CCDC115
IMP4
KDM3A
USP2
CCDC77
TMBIM4
RNF181
SLC25A51
PSEN2
NSUN4
PFDN4
EBAG9
ABCB8
OLFML2A
RIMBP3C
SMYD5
RTF2
TTC31
CCDC142
ATF3
KNTC1
IL1R1
L1CAM
POLD1
BIRC2
FAM72A
ZFAT
TRIAP1
INTS12
GSTCD
BCAS3
H2AC19
H2AC18
GTF2H4
LIMS1
ATR
ASF1A
BAIAP2
VTA1
NMBR
FAM72D
C12orf66
YTHDF2
UBE2Q1
CHRNB2
TSR3
GNPTG
ALAD
HDAC2
NUDT15
NEIL3
MAPK8IP2
RAB11A
MYNN
ZNF684
BHLHE40
RRP12
POLR3E
VARS2
ZNF764
PEX3
ADAT2
PLEKHM3
RGS3
CSTF1
AURKA
TRAPPC6A
BLOC1S3
SPG21
USPL1
C8orf37
FLAD1
E2F6
CKS1B
TSFM
TBRG4
DCAF11
TMEM199
POLDIP2
PHF19
IPO11
DIMT1
POLR3B
BSDC1
OGDH
DDX18
KLHL20
AMZ2
OPA1
HNRNPF
MDM4
ID1
SHOX2
POM121
MRPL45
CCDC146
C16orf71
ANKS3
NOP16
HIGD2A
USP54
NAGK
CMSS1
DUSP1
ARHGDIA
IGF2BP3
MRPL44
BLCAP
INKA2
MTIF2
HUS1
CD19
STAT3
BCAS4
KIAA1586
B4GAT1
UNG
ALKBH2
FMC1-LUC7L2
FMC1
HNRNPD
ACVR1
ZFPL1
CDCA5
RAB5IF
LRRC29
TOMM22
KIAA0895
CAND1
NUP35
TMEM230
FBXO5
CCDC86
AP1M1
CKAP2L
CWC25
MYCL
ASF1B
MACC1
SWSAP1
PGAM5
KIF2C
NOL7
RABEP2
DPY19L4
RAD51
KIAA0895L
SASS6
RGL1
KLHL32
COMMD7
FBXL13
ARMC10
QTRT2
CCDC191
D2HGDH
ARFGEF2
MCRIP2
UNKL
CCNA2
ADNP
LRRC59
PFDN6
ASIC3
INTS7
DTL
GTF2H3
EIF2B1
MED23
NNAT
AAR2
CYB561D1
ERMAP
SSNA1
ANAPC2
SNRPE
RINL
OR2B2
NBN
RGL2
PPP1R11
POLR1H
CACTIN
DDX31
ELL
TDG
MGAT5
TMEM259
GOLGA7
DPP9
CORO1A
DZIP3
DNAJC25-GNG10
DNAJC25
CIP2A
CHCHD1
SUPV3L1
RAB33A
KLF2
TMEM107
CNN2
ZCCHC14
TRMT6
MCM8
ATG14
ARPC5
TTC27
MAD2L2
KIF20A
BRD8
COX16
ESYT2
AVEN
SVBP
PMVK
KMT2D
PTPN4
MRPS23
SGO1
NDUFAF5
ESF1
PC
NFIB
TFB2M
CNST
PGBD5
CBWD6
KCNJ14
GRWD1
TEKT2
ADPRS
CYRIB
CDC25B
CFAP298-TCP10L
CFAP298
PTPRF
SLC24A1
NMNAT1
LZIC
PUS10
PEX13
LTV1
SAP30BP
RECQL5
EBNA1BP2
CFAP57
NAXE
TRAPPC9
NOXO1
ZP3
UTP3
EDC3
DHX37
BRI3BP
MTBP
MRPL13
ZBTB45
NAT10
LTN1
WDR70
NUP155
PIKFYVE
GNG14
GDAP1
STMN3
RTEL1
TSN
GPATCH4
TBC1D19
H4C12
MYBL2
ATAD2
ABCB10
NUP42
RRM2
DNAJC6
INO80B
H4C15
LSM5
AVL9
RIPOR3
GTF3C4
TOMM40
CKS2
CLK3
RSRC1
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
NOL6
SECISBP2
NR6A1
DCT
ZC3H15
RBKS
BABAM2
URB1
EPOR
POLR2G
C8orf33
SACM1L
TUBA1C
CORO7-PAM16
CORO7
RCC1
TMEM186
PMM2
PKDCC
TIMM9
KIAA0586
MRPS15
TFB1M
PMF1-BGLAP
PMF1
MINDY4
PIGU
VPS72
PIP5K1A
YIF1A
TMEM151A
POLR3D
ACTRT3
SLC27A1
NCOA7
MRPS16
GTPBP10
CFAP54
C5orf51
WDR46
SPRED2
MTERF4
NUCKS1
FAM72B
EZH1
EXOSC9
CDC73
MRI1
HIP1
RBM42
PRMT2
RPTOR
CCNL1
PMS2
AIMP2
CDC20
TPM4
TEAD1
EIF3F
TMEM94
LRRC37A3
GOLM2
ZNF276
VPS9D1
NOL10
FAM133B
ARHGEF1
TLE6
CUL5
YDJC
KIF18B
LSM12
G6PC3
ZBTB6
TMEM181
RC3H2
PAF1
MED29
SIRT4
VPS26C
C6orf47
APOM
TAF13
LRP2BP
HEATR1
ZNF830
CCT6B
EXOSC5
BCKDHA
DLG2
TMEM41A
TACO1
TNFRSF1A
FXN
ZNF165
RHCE
OR1F12
PPWD1
CENPK
NUP54
TFPT
PRPF31
ODF3L2
TTC21B
RPL23A
CASTOR2
IREB2
YPEL4
CNOT4
PARP16
OBSL1
SETD4
DNAJC9
LZTR1
TCTEX1D4
BTBD19
FAM98B
PRMT5
SMN2
SMN1
PNO1
CBR1
RNASE4
ANG
PGLYRP4
TEFM
SCRT1
SPDYE7P
ATP5F1E
MIER1
DNAI4
RAB34
ING3
ZNF778
PCYT1A
NEMF
TBC1D30
SMIM12
C16orf87
TIGD1
EIF4E2
HDAC11
ACVR2A
VPS45
PDE11A
POLR2J
TCF4
RCL1
GPR182
NADK2
DSTYK
TBC1D14
PPAN-P2RY11
PPAN
ZKSCAN8
SNAP29
PI4KA
RNF217
KIF15
KIAA1143
SLC39A7
RXRB
MRPS35
SFI1
EIF4ENIF1
ARMH3
H4C11
ZNF558
RIN1
CENPF
C1orf159
E2F1
RUVBL1
PPP6R1
KLF1
GCDH
DNASE2
POLE3
COG2
C9orf43
C12orf73
POLN
HAUS3
BAG6
FBXW8
ADHFE1