ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF143
POLR2J3
ZNF76
IL7R
PDXDC1
ARRDC4
NR4A1
HYAL2
HSPE1-MOB4
HSPE1
HSPD1
ATXN7L2
HHIPL1
CCDC85C
FAM53C
CDC25C
DAGLA
NNMT
SRI
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
TSR3
GNPTG
WDR74
STRBP
GPR137
BAD
ATR
TBL1X
GBA
DYNC2I2
C5orf51
NUDT3
COA1
TXNIP
RIN1
WASF2
SLC35E2B
SNX15
RAB22A
RCOR3
ATG101
BIRC3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CMSS1
KRT8
ERCC1
PSMA7
H4C14
RPN2
MROH8
PIK3R3
MAZ
IQCH
AAGAB
NEK2
YY1AP1
DAP3
EIF2S3
OTULINL
BRIX1
HAX1
HEXA
ATF7-NPFF
ATF7
FOS
GTF3C5
TEAD1
STX16
S100A2
SLC25A25
NAIF1
EIF3F
H4C12
NR6A1
EIF2D
CD55
KAT5
RHOT2
SPNS1
RFX1
TSC1
GFI1B
MAOA
H1-2
CPA4
FKBP14
HNRNPF
ZNF687
WDR70
HAGH
FAHD1
POLG
PDE4D
AMDHD2
LAMP1
GLIS1
GFM1
UBE2B
CDKL3
AGAP11
FAM156B
FAM156A
TSFM
NAGPA
PDK2
ALDH18A1
MFSD12
BRPF1
CDON
S100A16
USP2
FLOT1
RAPGEF1
SFSWAP
ARL8B
GPRC5A
RBM48
PEX1
PRKCZ
CDIPT
UBC
THEM4
DNAJC11
KIF1C
INCA1
ADPRS
COA6
ISY1-RAB43
ISY1
ANKRD13A
PRKCI
CUL2
ZC3H6
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
AURKAIP1
MRPL48
SETD1A
WDR43
ARFGAP2
P4HB
SLC41A3
NEURL2
CTSA
TMEM185B
CLPTM1
POR
DNAJB12
TSN
NADK2
SURF6
KCTD5
ASB6
FBXO4
CAPN2
SEMA3B
ATL2
LRRC37A3
CYP1B1
NDUFS3
KBTBD4
ATAD2
CLTC
CDK1
CENPN
EIF3B
RPL37
NUP155
TIGD5
EEF1D
ICE1
WASHC2C
RPL26
ZNF341
POLR2J
UBE2I
PPIB
H4C15
PHF1
JUND
SLC39A10
GCDH
NDST2
MAIP1
AAAS
SUMF1
NELFB
SLC9A1
SSNA1
ANAPC2
DISP3
DOHH
RPS26
AMOTL1
TRMO
USP15
CRBN
USE1
INTS4
DDX17
MYL12B
ROBO1
TMEM222
SUPT7L
SLC4A1AP
GNAS
TSEN54
CASKIN2
TRIP13
BRD9
NDUFB1
CPSF2
PTDSS1
MTERF3
ZNF335
TSR2
MRPS30
PIMREG
ATG16L2
DDX18
CLCN7
CDCA7L
DNAJC9
ASH1L
RELA
WDTC1
DGAT2
LMNTD1
BAZ2A
ZFAND3
RPS20
KCTD11
CALM1
CDK5RAP2
INAVA
CEP295
CTCF
SNAPC5
QRICH1
MYO9B
HAUS8
WARS2
NR2F2
SMIM12
SCAF11
H3C3
OSMR
TRUB2
COQ4
TMEM260
VIRMA
COG2
CFAP20
RNF103-CHMP3
RMND5A
EFCAB14
NSFL1C
CELF1
GIPC1
DIP2A
AVPI1
ZBTB26
TPK1
C1orf226
RPLP0
ZZZ3
PMVK
C1orf174
PHF19
HMCES
PRSS27
OXR1
ARFGEF2
NAA60
SLC35B1
SYT7
POLA1
QSOX2
PCCB
ZBED5
HNRNPH1
MGST3
PPP2R5A
DPH7
INTS7
DTL
LRATD2
RHOBTB2
RETREG1
PPCDC
VPS33A
CDK16
IBA57
PPP4R3A
GNL3L
PPWD1
CENPK
B3GALT4
RALGDS
S100A13
CHTOP
RBM8A
DAB2
LRPPRC
C6orf226
FUS
ITGB1
PPP6C
DOLPP1
ZCCHC4
SYNC
MTCH2
DYNLL1
PRDM11
GRIPAP1
DDX46
ANKRD33B
TSKU
NOLC1
MARCOL
PDHA1
AXL
SLC33A1
C21orf91
BRWD1
ZNF131
RPS14
LY6K
PPP5D1
CALM3
UBE3B
KCTD10
FZD1
NCBP3
SPRING1
RNFT2
ZNF219
NUF2
TBC1D13
VDAC2
ARL6IP1
MVK
CD59
ZER1
ZC3H10
ATP6V0C
JRK
RALY
MMP24OS
MMP24-AS1-EDEM2
PDZK1
HES1
MTRR
FASTKD3
DHX8
NOCT
MARCHF8
TOR2A
CALM2
KRT80
TMEM203
NDOR1
ETV6
CDKN1C
PMF1-BGLAP
PMF1
MET
NEDD4
PEX3
ADAT2
H3C15
H3C14
H2AC19
H2AC18
AFF4
POLR1H
TMEM18
SRPRA
DNLZ
CHCHD5
ZFP64
INPPL1
XPO7
WDR25
WARS1
KLF4
NSUN4
DPY19L4
FUT11
DIDO1
TOR4A
PIP4K2B
PFDN4
TAMM41
EFCAB2
TARDBP
RNPS1
ASH2L
PAIP1
SEPTIN7
ITPRIP
COPS7B
SLC20A1
CLCF1
HEMK1
USF1
SDE2
DDX41
U2SURP
RXRA
YJU2
RFESD
PHKA2
USP36
NCOA5
RRNAD1
ISG20L2
WDR5
ANTKMT
NDRG1
LANCL2
BZW2
ANKMY2
INKA2
DDX20
KIF27
ECT2
RPL5
ZNF503
ACBD6
PTGER4
DTWD2
AMOTL2
ARMC1
HIBADH
GUK1
MSTO1
ATF3
UBQLN1
SUPV3L1
STK35
MRPL21
IGHMBP2
SMAD7
GATB
TADA1
TPRA1
LRCH4
FBXO24
CREM
ARMH3
TMEM41A
EIF4A2
DMAC2
NUP214
DNAJC16
HIF1AN
ZNF774
GIPR
COQ7
PCBP2
H2AX
PLEC
DICER1
E2F8
DCLRE1B
AP4B1
OLFM1
NDUFS7
FAM72D
FAM72C
ACOT1
SSBP1
SKA2
PRR11
SMG7
PPP1R10
MRPS18B
CYP20A1
MUC13
WDR53
FBXO45
HACD2
BUD13
CYCS
FCHSD2
LRP6
CCDC97
UQCRC2
SLC25A45
ANKRD36C
SCYL3
ZFPL1
CDCA5
THG1L
MPND
ZC3H7A
PCIF1
CENPF
EPC2
SRSF3
XXYLT1
UMPS
STARD7
EIF4G2
GTF2IRD2B
GTF2IRD2
CABLES2
ATMIN
TARS2
KDM5C
NUDT9
TOR1A
CCNL1
RAD23A
PDCD6
PSME3
RBM14-RBM4
RBM14
ALG10
ZDHHC6
VTI1A
POLE3
C9orf43
PUS10
PEX13
ALDOA
TLE1
RAD51AP1
C12orf4
C18orf63
SURF4
RCAN1
HASPIN
SMC3
OAZ3
NECTIN3
VPS11
SRSF11
HNRNPD
LRRC40
SLC25A53
TMEM9
NME1
EXD1
CHP1
MAPK8
ARAF
NARF
PPOX
CCT5
ATPSCKMT
GALNT10
C2orf42
C22orf39
SMG5
LAMTOR1
BAZ1B
DCTN4
SF3B6
FAM228B
B4GALT7
DDB2
FURIN
THUMPD1
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
PPP2R3A
SDC4
SLC6A9
PAXIP1
BBS1
PIH1D2
NKAPD1
EPRS1
PTCD2
MRPS27
SUMF2
TMIE
ALS2CL
HDAC6
SIDT2
ELOB
RWDD1
SMAD3
MED23
UNC5B
SYNRG
SMARCD1
ZRANB3
R3HDM1
RNASEK
CCDC124
PEX11B
CSTF3
TIMM10
MINDY2
OSBP
ARL1
DLST
BNIP1
CAPRIN2
SRD5A1
NSUN2
ATXN7L3
ITGB3BP
EFCAB7
IFT140
CRAMP1
ARHGEF1
ACOT9
MAPKAPK5
CDC23
TCF3
ZNF185
MTMR12
RNF214
PCSK7
EIF4A1
PELP1
ARL4A
ZNF212
ZSCAN32
ZNF174
IFT52
NVL
LARP1
SLC35A4
APBB3
SLCO4A1
STK17A
NBN
CACTIN
LRRC8A
KYAT1
PSMB7
NRAS
SLC25A10
PRDX1
SNRPG
PYCR2
YY1
RCE1
MCOLN1
NOC4L
DDX51
DCXR
ATP8A1
SH3BP4
SECISBP2
ATF6
TACC1
PRKDC
MCM4
VEPH1
SELENOH
MFSD4B
IL18
SMIM6
AKT2
MCM7
AP4M1
NDUFC2-KCTD14
NDUFC2
ZFAND2A
SMPD1
ELP5
CTDNEP1
NMNAT1
LZIC
ARNTL
PANX1
ZNF524
FIZ1
ZNF668
ZNF646
SIRT4
FLCN
USP12
SLC36A4
TAF4
TIMM50
TENT4A
TBL3
SKP2
LMBRD2
POU2F3
PYGO2
LOC101928120
UXT
CTSS
SAR1B
TMEM201
KLF13
SYPL1
SAC3D1
WFDC3
DNTTIP1
ETS1
GABPB2
MSMO1
TCF19
CCHCR1
TFRC
C1QBP
PPP1R37
COPS7A
LPCAT3
MEF2C
SFT2D3
FOSB
PRC1
KDM4D
CWC15
PHAX
DTNB
YTHDF1
KNTC1
NTMT1
CXorf58
LIN7C
DPP3
SLC25A3
UBE2C
MSLN
SH3GL1
GUCA2A
TM2D3
MXRA7
KDM3A
KRT78
STK4
SF3A3
STX18
TCTEX1D4
BTBD19
ZBTB38
C1orf115
TOMM22
ATAD2B
GAPVD1
HSPA9
TK1
AFMID
RPL38
ZNF2
H4C3
XRN1
KMT2D
MBNL1
GCLM
TRMT61B
PINX1
MAD2L2
INAFM2
TXNRD1
LMNB1
C19orf53
SKIL
EPOP
MPV17L2
RBM4
TGFBR2
TM9SF3
ATXN1L
NR2C1
HMGCS1
TAS1R1
NOL9
PHRF1
NLE1
WDR13
MRRF
MRPL42
TMEM132A
FNTB
DIABLO
OPA1
GABARAPL1
RAB5B
GFOD1
SRCAP
LOC730183
SNAI1
UBE2Q1
ACAP2
FAM3C
RFWD3
USP54
EIF2S1
ATP6V1D
CIZ1
KRT17
GATAD2A
SMN2
SMN1
LAMTOR5
LOC101928841
PDE12
UBALD2
C12orf43
SUSD1
H1-5
CEP63
ANAPC13
EED
APOLD1
SIVA1
SH2D3C
NOC2L
NUP85
ADPGK
PRR5L
RRP15
CWF19L1
ATP5MC2
STK40
KCTD9
CDCA2
HNRNPUL1
TDP2
ACOT13
TUFM
SH2B1
WNT1
SENP1
PFKM
CSTF1
AURKA
POLR3B
CNTRL
C5
SRP9
C1orf53
DHX16
TRIB1
CNOT6
MIA3
C12orf57
NDUFB3
FAM126B
PTGS2
TRIP4
PARP1
SLC49A4
HSPBAP1
ZYX
MTCH1
NIFK
FBXW2
ZNF622
NXF1
IFRD1
APEH
TTLL7
SART1
BCAR3
WBP1
HECTD2
TRIM44
COA8
BAG5
PLD6
TMEM131
H3C13
H2BC18
SSBP4
PPP1R21
C2orf49
POLE4
NDUFAB1
SAP30BP
RECQL5
ARMC8
NNT
TCTA
RHOA
ATAD3A
UPP1
NPM3
MCTP2
NCAPD2
MRPL51
VWA7
HECTD3
HRH1
THAP12
GVQW3
COPS4
SP1
SEC14L1
ALDH4A1
TIMP1
GTF2H2C_2
GTF2H2C
HGSNAT
GFM2
RAB5IF
CLPTM1L
CDK11B
CDK11A
OTUD7B
ZNF593
C1orf232
BOLA3
PRRC2A
KAT8
KPNA7
KANSL1
UFD1
CDC45
GGA2
PKP2
MUC1
UBB
RNF114
ANKRD1
FAM83D
SRSF2
MFSD11
TXNDC11
TCEANC
GHITM
MARCHF6
TMEM9B
TOM1L2
DRC3
ALDH7A1
B3GAT3
USP31
SPECC1
IQANK1
FAM83H
RPS9
FRAT1
AARS2
CCDC34
BMS1
MTF2
PRMT3
PDE7A
ACAD9
SP2
VGF
PSRC1
HM13
ALG1
GMPPB
ZNRD2
HUS1
DUS2
DDX28
RP1L1
PARK7
KIF21A
LPIN1
AP1G1
ZNF181
NDUFS6
BLOC1S1
KATNB1
GRN
CUL7
RBM3
TSGA10
ZSWIM7
TTC19
SLC3A2
GPX1
SENP8
MYO9A
PSMB8
EIF1AD
BANF1
TAGLN2
SRSF4
CLUH
CCNT1
IARS1
CPLANE1
AMACR
UBP1