ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652959 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◣ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF76
ZNF143
HYAL2
ATXN7L2
HSPE1-MOB4
HSPE1
HSPD1
POLR2J3
HNRNPA2B1
CBX3
IL7R
DAGLA
HHIPL1
CCDC85C
ARRDC4
WDR74
PDXDC1
FAM53C
CDC25C
ALDH18A1
SLC39A10
SLC35E2B
SLC39A13
WDR70
WASF2
SRI
DNAJB12
OTULINL
SETD1A
ATG101
ZC3H6
RPN2
MROH8
NNMT
PSMC3
ZNF687
CUL2
FOS
NR6A1
CD59
STRBP
GLIS1
ZNF408
ARHGAP1
SNX15
XPO7
NUDT3
GPR137
BAD
NR4A1
YY1AP1
DAP3
ATAD2
MYO9B
HAUS8
DGAT2
TSC1
GFI1B
METTL25
CCDC59
HARBI1
ATG13
SPRING1
RNFT2
FAM156B
FAM156A
NEK2
GTF3C5
DDX17
KAT5
TSR3
GNPTG
TBL1X
TSN
COX20
ATR
PAIP1
TEAD1
MRPL48
ATF3
ISY1-RAB43
ISY1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDR43
GCDH
RALGDS
RAB22A
WNT1
RAPGEF1
CDK5RAP2
MTCH1
TMEM41A
LRRC37A3
BRIX1
DNAJC11
PRR5L
PDK2
USP15
FGGY
NDST2
CRBN
GNAS
TSR2
C5orf51
PHKA2
BRPF1
SFSWAP
EIF3F
RELA
CD55
UBE2B
CDKL3
USP36
CALM1
PIK3R3
MARCOL
TBC1D13
EIF2D
CDON
GFM1
SEPTIN7
NUF2
UBB
C1orf174
WARS2
ERCC1
PSMA7
PDZK1
ARL8B
DYNLT3
LAMP1
KLHDC10
FUS
CYCS
NTMT1
BIRC3
IBA57
NADK2
NELFB
CYP1B1
MAOA
PCBP2
JRK
SLC25A25
NAIF1
LANCL2
CALM2
SUMF1
METTL1
EEF1AKMT3
TSFM
MRPL42
TIMM22
KRT80
DICER1
HRH1
PMVK
CPA4
DNAJC9
SLC33A1
PRDM10
RRP15
PPP1R13L
POLR1G
HAX1
SSNA1
ANAPC2
GIPR
C21orf91
SDE2
ZNF674
EFCAB14
SLC25A53
USP2
POLG
TRMO
RPS14
FOSB
TADA1
DYNLL1
AMDHD2
TXNIP
ZER1
SSBP1
ZNF131
ATP6V0C
KIF1C
INCA1
EIF4A2
NAGPA
GPRC5A
UBIAD1
FAM149B1
ECD
CDCA7L
VPS33A
ASB6
GCLM
RCE1
BAZ2A
OGA
CEP295
TARDBP
NEURL2
CTSA
TIGD5
EEF1D
SCAND1
CHMP7
PRKCZ
RPL26
LMNTD1
PARK7
LRP6
NUP155
RBM48
PEX1
PER3
WASHC2A
PPIB
SPNS1
DPH7
COA6
DISP3
AVPI1
UQCRC2
DYNC2I2
STK17A
ASH1L
ZNF219
NR1H3
ACP2
FBXO4
ARAF
HAGH
FAHD1
AKR1B1
KAT8
TMEM9
PCIF1
IFT52
TCP11L2
NFX1
KIF21A
ICE1
AURKAIP1
PYGO2
LOC101928120
RRN3
MFSD12
COQ7
ZNF668
ZNF646
EED
TEX2
AAAS
PIP4K2B
UBE3C
TMEM132A
ETFBKMT
OSMR
GUK1
TMEM203
NDOR1
SOWAHC
SEPTIN10
MRPL44
MBNL1
MTRR
FASTKD3
SIDT2
DEDD
ATF7-NPFF
ATF7
EIF4G2
TMEM185B
NDUFS3
KBTBD4
HES1
FRAT1
FAM133B
U2AF1L5
U2AF1
ADPRS
PTDSS1
MTERF3
DOHH
ITGB3BP
EFCAB7
CFAP20
NDUFAB1
KMT2D
PRC1
SRPRA
ATXN2
H4C12
WASHC2C
USP49
TTC33
COPS4
NBN
KNTC1
MYL12B
ZSCAN32
ZNF174
SECISBP2
SSU72
TRIP13
BRD9
PCCB
GABARAPL1
PRPSAP1
NDUFS7
ING4
ATG16L2
STX16
H4C14
POR
ZNF335
RAD51AP1
C12orf4
RIN1
PPP5D1
CALM3
NME1
MARCHF6
PDE4D
DOLPP1
ZC3H7A
TMEM222
FBXW2
CNTRL
C5
CACTIN
UBE3B
KCTD10
PDCD6
SRCAP
LOC730183
COG2
CLPB
PINX1
EBAG9
SLC35E2A
MTBP
MRPL13
DAP
AP3S1
ATP5MC2
H4C15
CLTC
THAP12
GVQW3
GOLGA1
HSPA9
GBA
RBM8A
PSMD5
GTF2H3
EIF2B1
GTPBP8
PRKCSH
CCDC151
S100A13
CHTOP
RRNAD1
ISG20L2
PRDX4
PRKCI
ISG20
RPAP3
ATL2
UBE2I
FKBP14
AARS2
PGBD2
SLC35B1
NIFK
NCOA5
POLA1
ZNF212
GRIPAP1
EPC2
IQCH
AAGAB
CCDC97
SLC25A45
C8orf33
ATP5MPL
TTC9C
HNRNPUL2
YIF1B
ARFGAP2
NARF
MTCH2
MRRF
TATDN3
NSL1
USP42
PRMT3
TMEM199
POLDIP2
GGA1
COPS7B
EFCAB2
RPL5
COA1
CENPF
POLR3B
SRSF4
USP11
PTGER4
CAPN2
STAT3
NUDT9
ANKRD13A
USP9X
NR2F2
P4HB
ZBED5
TUBB4B
HMCES
SCAI
ZFAND3
TRIB1
MRPS23
HASPIN
STK19
DXO
LIMA1
MTMR12
UBQLN1
CEP63
ANAPC13
TPR
ODR4
ITGB1
ZDHHC6
VTI1A
SENP1
PFKM
ANKRD36C
ELOB
PGAP2
FCHSD2
EIF1AD
BANF1
IARS1
YTHDF2
MRPL3
TMEM14B
ITPRIP
PEX5
RNPS1
TRMT61B
DCXR
ZNF341
LARP1
CAPNS1
QSOX2
PEX11B
LETMD1
YARS1
S100PBP
THEM4
RAB5B
GABPB2
ZNFX1
SH3BP4
TIMM10
TTC31
CCDC142
GTF2IRD2B
GTF2IRD2
DDX41
CPLANE1
CDIPT
MSTO1
TAMM41
TRUB2
COQ4
TSEN54
CASKIN2
VIRMA
PARVA
WDR5
ENSA
TTI1
RPRD1B
RPS26
INAVA
MUC13
RCOR3
NOL8
CENPP
NDUFB1
CPSF2
CCDC124
CLPTM1
FOSL1
SURF4
PPP4R3A
KDM4D
CWC15
PTGES2
AMN1
EIF2S3
RHOT2
SNX19
LZTR1
WDR25
WARS1
C1orf226
SREK1
CLN3
TMEM267
SDHAF3
CLUH
WASHC5
NSMCE2
NCBP2AS2
NCBP2
TAGLN2
PPOX
POC1A
MCOLN1
QRICH1
POLD2
ARID5B
SLC9A1
WDR13
AMOTL1
ARHGEF1
TMEM9B
GIPC1
NIBAN2
MRTO4
EMC1
TIMM17B
PQBP1
MAP3K1
DDX18
ETS1
VPS37A
CNOT7
BMS1
SCAF11
CCDC174
BRWD1
MRPS30
MRPS28
S100A16
SLC25A3
ZYG11B
CDK1
SUPT7L
SLC4A1AP
PRRC2A
NCDN
KIAA0319L
HNRNPAB
WEE1
ZRANB3
R3HDM1
OXCT1
HSP90AA1
INTS7
DTL
DDX46
ASCC1
ANAPC16
RACGAP1
FZD1
LRRC8A
KYAT1
ARFGEF2
USP12
DDX59
SCYL3
SELENOS
CTNNAL1
POLR2J
CDK9
SMIM12
KATNB1
POLR2D
PXK
LMNA
OAZ3
C2orf49
MTF2
DGKZ
MLH1
EPM2AIP1
RPRD2
TSKU
PFDN4
C12orf57
DPP3
RPL24
USE1
SNRPD1
THUMPD3
TNPO3
AGAP11
CXorf58
C18orf63
PRSS27
OGFOD3
HEXD
PRRC2B
FEM1A
PHRF1
PAXBP1
S100A2
EIF3B
STK40
SUB1
POC5
UBC
CWF19L1
MDM4
STOM
PPP1R18
ADK
RPGR
TOP3A
SMCR8
GPBP1
MFN2
JUND
RPL37
THUMPD1
TCF3
NOCT
SRP9
SNRPG
NIP7
COG8
DHX35
RNF103-CHMP3
RMND5A
COPS7A
CCNT1
PTPN14
KRT17
RPL38
RICTOR
RNF7
EPRS1
SH3GL1
SLBP
FLOT1
PHF19
RCAN1
NSFL1C
CEP126
SPIN1
CTCF
BMF
RSF1
AAMDC
OSBP
MSL2
IFT140
CRAMP1
SIRT4
MRPL27
EME1
TMEM170A
TMEM14C
ASNS
TBX3
DYNC1LI2
LY6K
NUP214
SRXN1
LSG1
CDKN2AIPNL
CRY2
TMEM39A
CCDC34
EPB41L5
TPRA1
GFOD1
ZNF181
UQCRH
LRRC41
NNT
BICD2
RHEBL1
HDAC6
HSPA8
NDUFS6
PPIA
DLX4
ACTR1B
CSTF1
AURKA
CABLES2
FBXO33
SLC25A36
TMEM126A
MUL1
HEMK1
HNRNPH1
DCLRE1B
AP4B1
SF3A3
RXRA
LOC100287896
LIPT2
INTS1
ZSCAN16
DTWD2
DHX8
ARMH3
ATP8A1
ARMC8
GRN
GET4
PEX19
PAK6
MAP2K3
PHAX
BROX
AIDA
PBX3
MRI1
PDCL
EGLN1
GSTA4
LPIN1
C1orf53
INPP5E
SIVA1
MRPL17
ZFP64
PAXIP1
RALY
UBE2C
SRRM2
IPO11
UMPS
CIZ1
SMG7
TMEM18
PUSL1
ACAP3
H2AX
COA8
BAG5
LARS2
SUPV3L1
HPS5
GTF2H1
CDIP1
PDE7A
HERPUD2
ABHD16A
SLC25A23
ZNF286A
MAZ
BNIP1
CTSS
RUVBL1
SMAD3
CLUAP1
TUFM
SH2B1
SH2D3C
PDCD6IP
MAPK1IP1L
XRRA1
SPCS2
ZFAND2A
TPK1
LIN7C
POLE3
C9orf43
MARCHF8
ZFP14
KAT6B
PIAS3
ZBTB40
KDM1A
ASAH1
SLC20A1
INKA2
DDX20
TCERG1
MBTPS2
ALDOA
HACD2
NCOA4
RSAD1
USP32
KDM3B
INTS4
PMF1-BGLAP
PMF1
BLM
NDUFB3
FAM126B
FAM76A
RAD9A
C12orf65
CCN2
LSM2
GTF2H4
PPWD1
CENPK
AHCYL1
PUM1
BDP1
SLC16A1
MGST3
KLF4
SLC35A5
ATG3
SEC13
VKORC1
FLCN
PI3
CIPC
H2AZ2
ZNF165
NXF1
PC
RAD51AP2
KRR1
TRIM44
TIMM23
ACAD9
ANKRD39
BHLHE40
TBC1D2
RPLP0
PDHA1
PPP1R37
MRM3
GLOD4
TCF19
CCHCR1
FBRS
SMYD5
SYBU
CKAP2L
CIAO3
PREX1
RPS3
XPO4
KLHL11
WDTC1
PEX3
ADAT2
CENPBD1
DIDO1
CCDC88A
TRIM37
RPL35
ARPC5L
MIA3
GNL3L
CSTF3
HMGCS1
SMC1A
RIBC1
PICALM
FANCD2
SNAP47
JMJD4
RAD52
ZMPSTE24
TMEM39B
TMEM260
RBL1
POLE4
RBBP5
TBRG4
TENT4A
CNOT6
SCRIB
DTNB
SH3YL1
ACP1
PRR14
MRPL55
GMEB2
RBM42
GK
UBAP2L
C1orf43
CELF1
TBCE
MINDY2
ERCC5
DSTYK
GSK3B
ATAD5
RPRD1A
BBS1
STX18
DPY19L4
CENPS-CORT
CENPS
ABCD3
BRD3OS
DAB2
ALG10B
NOC4L
DDX51
PREPL
CAMKMT
BCL6
RPL7L1
SNX8
NECAP2
TARS2
CDK16
ST3GAL3
SPAG9
RBM22
PTTG1
CCM2
MAIP1
AP1G1
FAF1
KRTAP4-9
ZFAND4
ZNF830
CCT6B
SSR3
ZNF41
TMEM65
ZNF326
PTCD1
CPSF4
TMEM242
NDUFA2
IK
TACO1
PPP2R5B
VPS4A
NRDE2
ATF6
SRD5A1
NSUN2
SNAI1
WDR53
FBXO45
ZNF239
RANBP2
HS1BP3
MKRN2
TRAM2
DMAC2
AMOTL2
GTPBP3
ANO8
BMERB1
C5orf34
TIMM17A
GTDC1
ANXA2
ROBO1
UXT
TOM1L2
DRC3
CNBP
ANGEL1
RINT1
NEDD4
SLC35A2
FANCC
TAF4
VAV3
ZSWIM7
TTC19
MAN1B1
NAPA
RPS27
ELAC2
CSRNP1
DDX5
CEP95
MED28
PCNP
ERCC6L2
PPP2R3A
TCTEX1D4
BTBD19
CYP51A1
NTAQ1