ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652960 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◣ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF143
POLR2J3
ZNF76
HSPE1-MOB4
HSPE1
HSPD1
IL7R
ATXN7L2
HYAL2
WDR74
DAGLA
NNMT
PDXDC1
STRBP
HNRNPA2B1
CBX3
HHIPL1
CCDC85C
SETD1A
SLC35E2B
FAM53C
CDC25C
PSMC3
ARRDC4
GPR137
BAD
FOS
HARBI1
ATG13
SRI
ALDH18A1
NUDT3
GCDH
METTL1
EEF1AKMT3
SLC39A13
CD55
ATG16L2
NR6A1
TSR3
GNPTG
SNX15
WASF2
IBA57
TSC1
GFI1B
IQCH
AAGAB
GFM1
FGGY
OTULINL
MRPL48
BRPF1
RPN2
MROH8
WDR70
COA1
CPA4
GTF3C5
NR4A1
ATG101
SSNA1
ANAPC2
OSMR
DNAJB12
HAX1
RALGDS
MARCOL
C5orf51
CD59
FAM156B
FAM156A
CDCA7L
NOL8
CENPP
ZNF687
PPP1R13L
POLR1G
USP15
CALM1
ATF3
CUL2
SPRING1
RNFT2
WDR25
WARS1
ISY1-RAB43
ISY1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GIPR
NDST2
S100A13
CHTOP
TSN
NEK2
ATF7-NPFF
ATF7
KMT2D
TRIP13
BRD9
CDIPT
SLC25A25
NAIF1
UBE2B
CDKL3
DDX17
DISP3
MTCH1
TSR2
ANKRD13A
DNAJC11
NUP155
WNT1
TSFM
SEPTIN7
RCOR3
COQ7
FRAT1
SLC39A10
SFSWAP
ATL2
CXorf58
EIF2D
RAB22A
EIF3F
PARK7
HDAC6
PMVK
GLIS1
BRWD1
IFT140
CRAMP1
SUMF1
TADA1
UBE2I
KNTC1
PRKCZ
LANCL2
NDUFS3
KBTBD4
ZNF668
ZNF646
ZNF212
PEX5
C2orf49
MBNL1
TRMO
DDX18
DYNC2I2
NELFB
ZNF219
NTMT1
CYCS
CDON
NADK2
CDK5RAP2
ATP6V0C
TMEM41A
TIGD5
EEF1D
KIF1C
INCA1
SH3BP4
TBL1X
ZC3H6
MAP2K3
HSPA8
TXNIP
DPH7
GTF2H4
UBE3B
KCTD10
MRRF
ZNF408
ARHGAP1
STK17A
ATR
GNAS
RNF7
LRRC37A3
DICER1
XPO7
LRPPRC
MUC13
PRKCI
DGAT2
FUS
PAIP1
C18orf63
ALG10B
BRIX1
LMNTD1
PCBP2
DPAGT1
MFSD12
PIK3R3
NDUFB1
CPSF2
PHKA2
USP2
ARAF
GBA
EPB41L5
METTL25
CCDC59
GPRC5A
SLC33A1
DMAC2
BZW2
ANKMY2
PIP4K2B
SRXN1
POLA1
LAMP1
GUK1
QSOX2
AKIRIN1
CALM2
WASHC2C
PTDSS1
MTERF3
ATAD2
ZFAND2A
ASB6
CDK1
BIRC3
PDZK1
RRP1
ASH1L
NARF
FAM133B
TBCE
EIF4G2
EIF1AD
BANF1
NIFK
RAPGEF1
RPS26
ISG20
PRKCSH
CCDC151
RPL26
HEMK1
ICE1
ZDHHC6
VTI1A
PDE4D
GCLM
C21orf91
CYP1B1
SPNS1
TMEM185B
RBM8A
CAPRIN2
BOLA3
ACOT7
JUND
RPLP0
MIS12
DERL2
LMNA
TMEM203
NDOR1
STAT3
MRPS23
FEM1A
NR2F2
GTF2IRD2B
GTF2IRD2
POLG
MRPL27
EME1
H4C14
ZC3H7A
C1orf226
PHRF1
COPS7B
SECISBP2
PPIB
KIF21A
KCTD9
CDCA2
DNAJC9
PSME3
TRIM44
PMPCA
ENTR1
HES1
THUMPD1
PSMB7
POLE4
PSMA7
FGD4
PPP1R18
STX16
NR1D2
NKIRAS1
TMEM9
CENPN
MDC1
ARFGAP2
SURF6
RCE1
TTC9C
HNRNPUL2
ETFBKMT
SLC35E2A
WDR13
OGA
CDK9
POLR1H
POR
DOHH
DAB2
ENSA
NAGPA
DOLPP1
INAVA
ITGB3BP
EFCAB7
ANKRD36C
RBL1
PIH1D2
NKAPD1
PURB
USP36
TSKU
H4C15
TCF3
RHOBTB2
ATF6
CRBN
KRT80
RAD51AP1
C12orf4
CEP63
ANAPC13
WDTC1
CSTF1
AURKA
HPS5
GTF2H1
CCDC97
RIN1
SLC25A53
CAPN2
PDCD6
FBXW2
ZFP64
STK40
CPSF1
TBC1D13
USP42
SLC9A1
ROBO1
PRDM10
VPS37A
CNOT7
CKAP2L
PPP5D1
CALM3
ETS1
EED
ITPRIP
FCHSD2
NME1
OLFM1
ZNFX1
DGKZ
GRIPAP1
NCAPH
COA6
NBN
ECT2
C19orf48
HMBS
TP53BP2
JRK
CENPBD1
ERCC1
EFCAB2
TPR
ODR4
ADPRS
FBXO4
EIF4A2
PRR5L
SLC35B1
MAIP1
PAXIP1
UXT
CTSS
PTCD3
POLR1A
RSF1
AAMDC
RNF114
ARL8B
MTCH2
H2AX
SKA2
PRR11
CSTF3
PPIA
MAPRE1
YY1AP1
DAP3
WDR43
USE1
PPP4R3A
RCAN1
NSFL1C
PHF8
MARCHF6
FAM161B
COQ6
NUP214
CCDC34
ZNF185
MYO9B
HAUS8
RFX1
TAGLN2
EBAG9
LPIN1
MIA3
ZNF263
H2AZ2
ZNF487
NUF2
RAB5B
SF3A3
TMEM9B
CDIP1
CDK5RAP1
SSBP1
LRRC8A
KYAT1
ARL14EP
AAAS
NGRN
TEAD1
COX20
SRPRA
DTWD2
PRPSAP1
TXLNA
FOXN2
C12orf73
AGAP11
FOSB
ZNF131
HNRNPUL1
SCAND1
VDAC2
ASH2L
CIAO3
CLYBL
ENDOV
MT2A
EPC2
MRPS2
C9orf116
NEURL2
CTSA
PCCB
DDX41
ETV6
C1orf53
HNRNPA0
RMI1
HNRNPK
VPS33A
AARS2
HASPIN
PEX11B
SUB1
KPNA1
CBWD5
COG2
GFOD1
TRIB1
PRRC2B
SRP9
ZNF341
POLD2
PDE4DIP
GALNT10
CEP126
RBM3
UBB
PFDN4
MET
UBC
THAP12
GVQW3
APOLD1
SMC1A
RUVBL1
RIBC1
ZFP14
EEFSEC
GPATCH3
POC5
NOCT
USF1
RPL22
ZNF777
RRN3
NSUN4
AMN1
MTMR14
BAZ2A
CHMP7
PMF1-BGLAP
PMF1
ISCA1
HRH1
TSEN54
CASKIN2
CENPF
SRSF3
PPP1R37
TRAPPC3
MAP7D1
NMNAT1
LZIC
TCP11L2
SMG5
P4HB
PPOX
HNRNPF
USP9X
OXCT1
NVL
PSMD4
SCRIB
DLST
HACD2
C17orf49
SAAL1
MAPKBP1
LRP6
MRPL42
SLC20A1
RWDD1
NUDCD3
POFUT1
PLAGL2
CSNK1D
AKR1B1
CLUH
ZNF181
PPP2R5A
COMMD2
MAOA
ZNF335
TRUB2
COQ4
NLE1
TST
MPST
KAT5
AURKAIP1
TMEM132A
NDUFS6
MYL12B
FAM72D
FAM72C
SLC25A3
EXD1
CHP1
NCOA5
DEK
OXR1
TOM1L2
DRC3
INPP5E
SLC25A10
ZNF2
NIP7
COG8
EDF1
HDGFL2
THEM4
RPL24
GSN
SLC35A5
ATG3
SREK1IP1
CWC27
NUP42
S100A2
SLC25A45
PXK
E2F8
TPK1
MSTO1
CIPC
KLHL18
KIF9
NAV3
CCDC124
B4GALT7
APEH
AP1M1
CREM
TIMM23
NOC3L
ZNF286A
PRIM2
BNIP1
COPS7A
SREK1
RNF220
MRPS14
PCNP
TRIAP1
INTS4
CNOT6
TARS2
ACAD9
PRDX4
LSM4
RNPS1
SIRT4
SRCAP
LOC730183
FLCN
SAMD4B
GOLGA3
SUPT7L
SLC4A1AP
SIRT1
CAMTA1
TMEM138
CYB561A3
SENP2
TOX4
RAB2B
PLSCR2
S100A16
RPS14
RNF103-CHMP3
RMND5A
ZCCHC4
ATP5MC2
SUPV3L1
HLCS
MAGI1
CLPTM1
TMEM260
SRD5A1
NSUN2
CENPS-CORT
CENPS
SH3YL1
ACP1
AXL
CTR9
ATAD3A
MED20
BYSL
PKD1
ELOB
CDKN1B
ABCB8
SPATA24
SYS1
WDR36
THAP9
SEC31A
FKBP3
SLC36A4
SIVA1
KAT6B
H4C8
KLHDC10
SURF4
UBIAD1
XXYLT1
KRT17
SRSF6
GATB
TWF1
DDX1
INKA2
DDX20
USP49
TTC33
IARS1
SNX19
CDC23
SOS1
INTS7
DTL
NDUFB3
FAM126B
UQCRH
LRRC41
RNF214
PCSK7
MICU2
BMERB1
DCLRE1B
AP4B1
SAP30BP
RECQL5
CELSR3
TMEM14C
SEC14L1
DPH1
TCF19
CCHCR1
PPIL4
MRPS16
PXT1
KCTD20
PCIF1
PRPF8
RELA
TMEM267
MAP2K1
MSMO1
PKD1L2
ATF4
EXO1
CCDC200
ZFAND3
ZSCAN32
ZNF174
PDHA1
AP3S1
ALDOA
ZNF326
UBQLN1
RRNAD1
ISG20L2
ARHGEF1
STK19
DXO
YTHDF2
USP11
ST3GAL3
CCDC130
NOL11
B3GAT3
PC
C12orf65
MED17
PTPN14
SF3B6
FAM228B
AVPI1
PTGER4
ZNF622
RNF187
TEDC1
TDP2
ACOT13
OTULIN
HADHB
HADHA
FLOT1
BMS1
GABPB2
ZNF410
LEMD2
PHF19
CIZ1
MTF2
NECTIN3
ZNF165
MRPS5
CLCC1
GNB2
TAF1B
ZNF696
NOC4L
DDX51
GATAD2A
MRPS15
CENPH
INO80
NTAQ1
ZBED5
HNRNPH1
CNTRL
C5
ADK
POLE3
C9orf43
U2SURP
PGAP2
SLC9A8
YEATS4
ZNF785
CD63
RPL37
ZBTB26
UBE2Q1
MORF4L1
CERS5
PYGO2
LOC101928120
LY6K
MCOLN1
SRRM2
TAF4
RRP8
ILK
STOM
SSR3
GHITM
H4C12
BBS1
TCERG1
PRRC2A
TBRG4
XAB2
SLC24A1
HS1BP3
COQ2
RABL2A
FKBP14
NR1H3
ACP2
MGST3
NUP160
CLUAP1
SEC13
DPP9
MPP5
WDR45B
TATDN3
NSL1
KDM4D
CWC15
TK1
AFMID
GPBP1
CCDC88A
C9orf16
CTNNB1
STXBP3
SYBU
IPO11
SP2
RNF19A
TPBGL
USP31
KRT16
CMSS1
CFAP20
SOWAHC
SEPTIN10
GNL3L
FAM149B1
ECD
NCBP3
ANTKMT
CKAP5
MRI1
THEM6
RRAS
ZNF764
EVI5
HAGH
FAHD1
CWF19L1
PREPL
CAMKMT
ANKRD39
DNLZ
FOSL1
PER3
BMF
SLC35A4
APBB3
TMEM131
ABCD3
PLEKHF2
FBXO28
RPS12
URB2
TAF5L
ATP5MC1
SNF8
LRP12
AMDHD2
EIF2S3
RRP15
DEDD
PRC1
TPRA1
GOLGA1
PTGS2
UBFD1
EARS2
RTRAF
CPPED1
MAK16
ABCA5
HEXA
RALY
FAM76A
MBTPS2
RTF2
ZFPL1
CDCA5
PUF60
MRPL55
RPTOR
RTEL1
ABCF1
TAF1A
HMCES
C2orf42
SMN2
SMN1
USP20
C9orf78
RPP40
THOC3
POC1A
LRCH4
FBXO24
STK35
NEDD4
ARMH3
ANKRD36
NAP1L4
GALE
RBM10
NDUFB11
CFAP410
ARMC5
PEMT
RHOT2
CDKN1C
TIMM17B
PQBP1
TOP3A
SMCR8
EEF1E1
NDUFA5
GSK3B
POLR2C
USP12
MRTO4
EMC1
INAFM2
ZNF503
TM9SF4
PREX1
ZNRD2
MED14
CHAMP1
FAM162A
CCDC58
MTHFS
VPS50
HEPACAM2
BROX
AIDA
MLH1
EPM2AIP1
AMACR
ARL1
NCOA4
POLR2D
NAGK
DHX35
TNFRSF12A
DNAJC30
BUD23
MRPS21
DEPDC1B
TMEM222
NCDN
KIAA0319L
COMMD6
PRKAB2
CHD1L
UBP1
SPSB2
C10orf143
DPYSL2
KIF27
ZNF674
TCTA
RHOA
RAD52
ZNF438