ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681306 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◣ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

ATP12A
ADGRG5
SRM
P2RX5
NAPA
RERE
RAB4B
MIA
GSK3B
ABHD12B
CD37
DNAJC5B
EGR2
RYK
FAM160A1
BAIAP2
SBF2
CLCF1
DEF8
ZNRF1
PLEKHA1
SUCLG2
TTC21A
GORASP1
LMNA
EMID1
ITGAE
WDR74
CD2BP2
IL17RA
IFFO2
HELZ2
PTK2
SYTL3
LYL1
PTAFR
GRHL3
LGMN
IFNLR1
RIN1
MYEOV
CYP1B1
RUNX3
SPON2
PTPN6
TUBB3
MC1R
FCER1G
KIF13A
HNRNPLL
IFIT3
ASB2
PDE2A
LCP2
NIBAN3
SMYD4
RPA1
HYLS1
RAB3GAP1
CTTN
RUNX1
HSBP1L1
ARIH2
CCR1
PIK3CA
ALCAM
FLT3LG
VOPP1
DMWD
DENND2D
SELPLG
DDHD1
MPEG1
FBXO17
FRA10AC1
LSP1
GPR68
UPP1
RASA1
DGKD
WNT1
C1orf127
SYNE1
RFC2
BCL3
CCL4
MCTP2
ZBP1
SMIM3
PLEKHG6
FAM118A
LMO2
VPS37C
IGLL5
SLC2A5
ASAP1
FGF2
DDX3Y
BTRC
ESR1
DYNLT1
GPR35
RBSN
DBNDD1
BLK
PPFIBP2
CLN3
APOBR
ADAP1
LTA
FCRLB
MYH9
CHST12
SPATA4
IL19
IL10
HGSNAT
CCL3
LZTFL1
NOP53
CFAP54
NCF4
SIT1
EPYC
HES1
OR2T1
PIGV
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDR81
WDFY1
GNA13
RPS3A
RAD52
HSH2D
ZSWIM6
PTPN12
ZNF541
SNAPC3
SERF2
ELL3
ITGB7
TMEM229B
ARHGEF3
RPRD1A
SYPL1
PLCB1
LRP12
JAG1
STK17B
CLN5
ARID5A
KLRD1
HMCES
TENT4B
APOBEC3B
TIGIT
SNTB2
FLOT1
FASLG
FAM243B
FAM243A
CLIC3
PLEKHG1
CDH1
TMEM109
PRPF19
GABARAPL1
PDGFB
ACAA2
KANSL1L
MAD2L1BP
CD28
CYP51A1
GRAMD2B
NCOA3
FCRL4
GPR132
JAML
CNIH1
SEMA6A
ACSS1
EHF
MAD1L1
ATP2C1
RHEX
BIRC3
KMT2E
NT5C1A
ELMO2
CD209
DMXL2
SDCCAG8
CEP170
GPR55
NDFIP2
TNIP3
VPS36
CKAP2
NFKBIZ
RABGAP1L
NTRK2
LAMP3
TUBG2
NRROS
OTULIN
ITCH
SLFN12L
SEC14L1
CLN8
PIKFYVE
IGSF6
TNNI1
CXCR3
BANK1
RGS1
TMEM138
CYB561A3
CUEDC1
NME7
BLZF1
ABCD2
RNASET2
ZNF705E
AMN1
FCRL6
LNPEP
YARS1
S100PBP
UHRF2
RARG
CCIN
ZNF565
ZNF146
TADA1
ZFP69B
MFF
ARHGAP31
GRIK4
RASSF2
RNF125
BHLHE40
ZFP36L2
PRODH
LOC102724788
DOCK10
CAST
NCKAP1
OXCT2
AKNA
ZPBP2
IKZF3
MEN1
PSMC3IP
LAT2
CORO7-PAM16
CORO7
RFFL
TARS3
TRAF3IP3
AFF3
SLCO3A1
MAP2K1
SMARCAL1
FCER2
PPP1R3B
CTSZ
PARP1
TJP1
SPRED2
FAM234A
FHAD1
SPINK2
TOM1
ECSCR
DEFB108B
LRRC32
EVC2
EVC
HIF1A
DOHH
SPOP
EPHB2
LARGE1
TSHR
BPHL
UTRN
IL6ST
RASGRF1
CX3CL1
SLC39A13
DCAF12
SH2B3
THEMIS2
FRMPD4
SMARCC1
TMEM104
NAT9
MARCKS
MACC1
PDXK
KRI1
CDKN2D
ZNF341
RSPH14
TSACC
CCT3
NAGK
ELF2
NAA16
MTRF1
ZNF791
ZNF490
KCNJ1
TIMM17A
SH2B2
STRADA
CEACAM3
ARID3B
HECTD1
SPTY2D1
LIMS1
GCNT1
RFTN1
MGAT1
PDLIM1
SNX20
NOTCH2
ITGA4
UCP3
ZYG11B
SMAD3
FUCA1
AP1S3
COA6
WDR41
TBC1D22A
MGAT5
SLC17A7
TACC1
TTF2
PKM
ICAM1
EFHB
ECE1
CDH17
BCL2L11
PIK3R2
SMG6
DUSP2
ZNF302
MAP1LC3B2
TNFSF10
CD226
ST3GAL5
PSIP1
ZGPAT
ARFRP1
B4GALT1
LDLRAD4
ODF3
SCGB1C2
SCGB1C1
USP6NL
C9orf72
ICE2
IL4
CMKLR1
SMAGP
AFF1
TAS2R50
TPST2
ACTG2
SLC3A2
OGG1
ZMYM4
ABLIM1
GRAMD1A
RGS12
TMEM41B
ZP3
TTC39C
PDGFA
PARVB
IL6R
BCO2
SHQ1
TEX12
LOC102723996
ICOSLG
EVL
ARL5B
NSUN6
ATP13A2
CFLAR
CSNK1G2
TRIAP1
SRSF5
MSGN1
PKIG
HMGCL
HDC
RAB38
GRN
CLUAP1
ARID5B
RMND5B
MKRN1
SUN1
TPD52L2
ABHD16B
AMZ1
CD72
CYFIP2
TNFRSF14
C1orf162
TRIM8
TLR10
FKBP5
RXRA
CREB1
NEK6
TSC22D2
NR4A2
TNFRSF13B
CCDC126
WDFY4
STING1
CYS1
SAMD10
PRPF6
ANXA4
AAK1
ITGAL
TRIM7
MYCBP2
RARA
CD82
YAF2
APBB1
ARF6
ABR
EHBP1L1
ZNRD2
FAM89B
LARP4B
CD38
ACTR3
TRIM2
SMARCA4
ASNS
STBD1
RASAL2
NLK
HINT2
SPAG8
CEP192
NINJ2
GPR82
CD59
MS4A1
PROB1
MZB1
ABI1
SYT12
NUGGC
AGPAT3
PPP1R9B
TOX2
ATP6V0A1
SORBS1
TSPAN5
ADA2
TMEM37
APELA
CEP68
IQGAP2
LTK
GALM
ARHGAP25
WHAMM
FSD2
ZNF397
ODAPH
HNRNPA2B1
CBX3
CLEC2D
CCL22
GNG12
HOMER2
DPEP3
LOC283710
TCTEX1D2
ANKRD13C
PCDH8
SEC31A
THAP9
SIRT1
CD1C
CELF2
GNA12
TMEM116
ERP29
METTL7A
SPTBN5
KLK4
TAGAP
AP2A2
SYCP2L
KSR1
POLI
EIF4ENIF1
SLC16A13
ADORA2A
FBXO10
MFSD10
SSH1
EPB41L2
LCP1
AGPS
KCTD6
RBM6
MBD6
DDIT3
ZNF799
CD55
AIP
BHLHE23
SPAG1
ARHGAP45
CCDC117
SYNJ1
NLRC3
SKIL
CCDC113
PLD4
PJA2
PCM1
MAPK3
SEC23B
HLA-B
ENPP2
GTF2E2
FRMD4A
HERPUD1
RAP1GAP2
MSL2
RHOH
EVI5
PIGX
CEP19
TNK2
CPPED1
GPR171
CBLL1
LASP1
ARSB
TMEM147
CSK
PRR12
MVB12A
BST2
BCL2L1
KDM7A
SLC35C2
SLC1A4
LEUTX
RAB12
C2orf16
HSPA4L
MYL12A
SLC25A37
SS18
ZNF821
ENPP5
TCF4
GPR65
C3orf86
FILIP1L
PCED1A
VPS16
SLFN13
CAMK2D
RAB11FIP1
SPECC1
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
CLDN3
MXI1
E2F7
CBWD5
CEP112
EMP3
CCDC114
CD1A
SEPTIN9
GSTP1
ATAD2B
ILDR1
BOD1L1
XRCC5
RAD54B
FSBP
SCD
TSGA10
PRPF40B
CTH
NEURL1
QSER1
SPATA6L
PLPP6
PIK3R5
ZBED5
GPR146
TNIP1
MAPK1
LRRC34
FOXO3
TYW3
CRYZ
CCL15
IL16
FAM47E
SCARB2
BIRC2
RNASEK
C17orf49
ADPGK
RNF166
IFITM5
ZFP3
GPX4
HOXA4
CLCC1
TNFRSF10C
TLNRD1
TBC1D5
NUMBL
NPIPB6
MCUB
SMPD1
DYNC2H1
CDK13
SBF1
CHIC2
RAD50
SCAMP2
MPC1
FOS
PPP1R16B
DEPP1
NFE2L1
HNRNPUL1
KIAA1841
TFAM
IL2RA
OGFRL1
CYB561
UBE2L5
CD101
ACP5
RNF213
ELAVL3
CLECL1
CA13
POU2F2
XPC
LSM3
IL9
CACNB4
GSPT1
DSE
RASSF5
CBLB
DENND5B
KCNJ15
RBM43
OSBPL8
SLCO4C1
FYCO1
SLC37A2
CLIC5
H6PD
RALGDS
CCR7
FCGR2B
CRIM1
GPR141
RAB22A
IFNA2
ARHGEF10L
ABCA7
FAM169A
GTF2A2
AP4E1
CTXND2
COLEC11
C2CD2
AICDA
PCMT1
SYNE2
SMYD3
CMTM3
SFT2D3
NCOR2
CD86
ZNF500
TLR1
TFAP2A
PARP15
CEP83
SNAI3
PIMREG
FCAMR
CCPG1
C15orf65
DEGS1
TTC7A
MCFD2
RCOR1
BNIP3
CCL3L3
CCL3L1
VWCE
TMC8
TMC6
LILRB1
PDE4A
MAG
FILIP1
NADK
WASL
ODC1
TMEM123
GAN
PACC1
IL1R1
SMIM14
TNFRSF17
NPIPB2
CD4
FTH1
CTDP1
ZSCAN2
SLC12A2
GDI2
ACTG1
NTMT1
BUB1
TANC2
TP73
SLC35B3
ITGAX
ZBTB21
SLC26A11
GLIS2
VKORC1L1
EHD1
PMVK
TC2N
REM2
NKG7
PLD3
CLDND2
ERO1B
HPSE2
CRYM
TRMT6
MCM8
NANOS1
RAD51
NKD1
RAB43
STX1A
TRAF4
SIKE1
HOPX
TIFAB
IL21R
SSX2IP
CFHR4
OCSTAMP
KLHL29
FGR
RIC1
ATF3
CD300A
SPDYE3
NAA50
ATP6V1A
SOD1
SLC43A3
TNFAIP8L2-SCNM1
TNFAIP8L2
PYCR3
KDM4C
N4BP3
DPY19L4
TSC22D1
SIGLEC10
NPIPB11
SPATA13
FUS
DCDC2
KAAG1
ZNF584
COPS4
ABCB1
EXOSC5
BCKDHA
NIBAN1
PRKACG
PDCD1
LITAF
SLC7A6OS
PRMT7
SLC4A4
LYSMD2
UGCG
GCFC2
ANXA5
FAM122C
UPF3A
HMGA1
TMEM212
CCNI
UCHL5
RO60
TAGLN2
KATNAL2
PIAS2
MIA2
FLCN
CD79A
LOC388282
CNR2
MNS1
CLEC7A
MAML3
EMILIN1
LACC1
CCDC122
UPK3BL2
CLIC4
ELK3
ACVR2A
ESYT2
RIN3
CD244
SPDYE17
PTPN22
RAB8B
ELOF1
ERBIN
C5orf34
SASH3
PPP1CC
MFSD3
GPT
GPR31
VPS26B
NCAPD3
IL4I1
PTPN2
KAT7
SCIN
LRRC43
CYTH1
AKAP13
NINJ1
ZNRF3
INSC
RGS3
NEIL1
OASL
IDO1
DCAKD
NMT1
ZCCHC14
SACS
HHAT
BID
P2RY8
MOB3B
IFNK
XPO6
ZMIZ2
TMEM67
TMBIM1
ZFP91
LPXN
RNF19A
UPF2
TESK2
ITGB2
RASGEF1B
HECTD4
ATP6V0E2
LEPROTL1
LBH
KDM8
AGRN
KCTD5
MTHFD1L
SLAMF8
TNKS
ELK4
ZCCHC3
MB
MTG1
IL13
SLC48A1
TRMT61A
CKB
ZNRF2
ALOX5AP
HEXB
ANKRD26
CCL26
PTGER4
CLIP2
GABPB1
ASB1
MDM2
PTCH1
DSTYK
BCL2L13
OXR1
ITGB8
PCBP1
BCL9L
CCDC124
AKIRIN2
TPM1
DUSP14
PRND
PICALM
DENND6A
CCL2
GADD45B
PSD4
POLE3
C9orf43
CLDND1
PAPOLA
CCDC130
AHNAK
MAK
CGB7
NTF4
MED16
CTSC
TPR
ODR4
NRAP
RDX
CYP26A1
C12orf73
CBWD3
CBWD6
IQCC
CCDC28B
SAC3D1
IVNS1ABP
SLC31A1
FKBP15
HNRNPL
ACADM
FBXL22
ZZZ3
IFI27L1
DDX24
TIPARP
ZNF446
DIPK2A
TTLL12
HLA-DMB
SFSWAP
RCBTB2
PHC2
STRBP
SLC25A13
SOWAHD
PRKD2
ADGRE5
USP48
STK11IP
RBM47
NPIPB8
WASHC3
PTGER2
RGL1
UBQLN1
PPCDC
FAM168B
STYK1