ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188635 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◣ SRX5188635: SNU-484

◢ RUNX3: STRING

RUNX3
RPN2
MROH8
ZNF624
CDCA4
RARRES1
PPAN-P2RY11
PPAN
P2RY11
MRPL12
KPNA4
HFM1
NIT2
SEPTIN5
S100A8
CDC42BPA
DSP
GSTT2B
DDT
DDTL
KIAA0513
RSRC1
CPVL
CHN2
SPDYE2B
SPDYE2
MBD3L2B
OR2T2
B3GNT5
GPR20
GOLGA6A
ATP2B2
JCAD
APP
H4C1
H3C1
H1-1
NLGN1
MRS2
GGT2
OR4N4
TRIM40
KRTAP26-1
GSDMC
LRRC37B
CLPSL1
GIMAP5
FRMPD2
UST
NRP1
DAB2
ABCA4
LRBA
TCF19
CCHCR1
DEFB4B
CLDN8
TRH
OR2T35
SLC2A5
BCR
CACNB2
OR2T5
OR2T29
ITGA11
CNTRL
SPATA22
GPRIN2
ARF6
UBA7
NUMBL
AHCYL2
VOPP1
PRSS16
NBPF10
ZBTB22
C21orf91
TAPBP
DAXX
NEO1
PRAMEF33
PRAMEF10
PRR23D2
PRR23D1
C1orf162
USP16
RWDD2B
SPDYE18
CCNT1
SEC22B
TTC31
CCDC142
SPAM1
PGA4
TRIM64B
HTR3C
H4C2
SPA17
SIAE
TFAP2E
CNNM2
PDE7B
FOXD4
CNPY1
RASGEF1A
PPIAL4F
PPIAL4E
PPIAL4D
DSCAM
SUPT20HL2
RHOG
MRPL58
C3orf20
SAMSN1
ZNF480
CCL11
GCNT2
TMEM41A
GGCT
SPARC
ENPP5
CCL3L3
CCL3L1
HHLA2
NFKBIL1
DDX39B
ATP6V1G2
EPHA8
SMCO1
CCDC91
SLC16A5
OR2G6
TMEM71
INKA2
CCND3
DDX20
NBPF1
NXPE3
PPIAL4H
GAS2L2
PPIAL4G
ARHGAP31
CDK12
OLFM2
CCDC152
ASCL3
MRPS24
ZNF276
VPS9D1
TRAPPC12
EIPR1
GBX1
CHRM3
MSL1
TMEM177
ECHDC3
DYDC2
DYDC1
SLC22A8
NME8
MEAK7
GSTA4
GNG4
MBD3L2
GSTA2
C16orf54
ZFAND2A
ARF1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RGS3
RIOK1
CAGE1
SLC25A44
XRRA1
SPCS2
RSAD1
PGBD2
SKAP2
TRPV1
ECE1
CCL22
CSNK1G2
PDE4DIP
ETV3
ABCB10
NAPG
TXNRD2
CDHR3
PAK2
GGT1
FAM172A
MPC2
DCAF6
ICMT
HES3
FGFR4
KRTAP19-4
KRTAP19-3
PLCH1
PRAMEF4
AFF3
CD86
ZSCAN31
ZKSCAN3
SLC35F3
ADCY4
MEF2C
YPEL1
MKLN1
SLFN5
ZNF32
PRR14
MSRA
ETS2
LGALS9B
PADI1
LBX2
MAPK9
C3orf18
CDHR2
IL20RB
ETV1
SMIM35
GJC2
SLC2A7
EVA1A
DMBX1
ACTL8
OTOF
MRGPRX2
FAM166C
LGALS3BP
KRTAP6-3
KRTAP6-2
KRTAP22-1
CYB561
SLC39A6
ELP2
ESR2
TM7SF2
CCDC71
GOLGA6B
KLHDC8B
NBPF15
RPL36AL
MGAT2
MRPL38
CDC5L
TRIM65
TCTE1
GLCE
ALDH5A1
SP4
IKZF4
MECOM
GPLD1
HOATZ
BTG4
ADORA2B
PTPN22
POGLUT1
SH3BP5L
DGKB
PSMD11
KIF20A
BRD8
PDE6G
MLIP
PTPRT
TPRG1
KRTAP13-2
CCDC179
AMN1
IGF2BP3
SLC35A5
ATG3
AGFG2
HSPBAP1
GABPA
ATP5PF
KRTAP20-4
ZNF80
ANKDD1B
SYS1
ZNF718
PA2G4
HOOK2
C15orf39
FDFT1
MRNIP
LANCL1
CPS1
KRTAP23-1
OR52A1
POLR3A
TOP3A
SMCR8
PNPLA2
CLBA1
OR5K3
MAS1
SERPINB6
VCX
CRYBB2
GSTP1
IVL
GTPBP4
CELF1
KCNE1
EMC3
OR2L3
CFAP298-TCP10L
CFAP298
ZBTB38
DGAT2
GFM1
SERF1B
SERF1A
PCMTD2
EIF2B5
RPA3
COX20
LTN1
PLAAT4
ZNF717
RPS6KC1
ST3GAL6
EIF1
CELF6
IFT80
EIF2AK2
KRTAP13-4
KRTAP13-3
GCSAML
TEKT1
ASAP1
EIF2B2
LPCAT1
SFI1
CRB1
FIBP
CCDC85B
CRIP3
SPAG11B
RAB36
SDHA
CCDC127
USP10
KANK3
SLC44A4
NCOA7
SRGAP2B
FSTL3
AURKB
TTBK1
AGR3
ACVRL1
PCBP1
ZNF148
IRF5
HPS3
TMCO4
EMC8
COX4I1
UBA5
ACAD11
SYCE3
HLA-G
OR2A25
CD28
GPR132
PDXK
EHBP1L1
MAP2K5
HEXB
MACO1
ACTA2
CCDC33
ANKRD28
CCDC112
TMEM94
SUN2
TSNARE1
PHF24
VSIG4
DLG2
TEX264
TSPAN12
ZDHHC5
GPR174
CEP128
CCS
CCDC87
FEM1C
LSG1
RPS3
APC
SYTL1
EIF5
PNKP
FGFBP2
TRIM31
SLC25A36
DMD
TCL1A
EPHA6
S100A3
YAP1
ARHGAP44
SPIDR
ASCL5
PRSS35
RIC3
RASD1
LGR6
MPV17L2
SCHIP1
FKBP9
LYZ
GALNT16
OSBPL6
CXADR
CELSR1
TAAR1
PCDHA7
PCDHA6
C1orf116
MIXL1
SLC23A1
RNF182
GLI2
PCLO
SERPINA10
NPSR1
CABCOCO1
SLC6A18
AMTN
KLHL34
OR2C3
TEAD1
NPIPB4
TAF7
SRPK2
IFT46
CHMP3
CIBAR2
PMP22
DTD2
RPP30
SPATS1
PRLR
TRIM16L
CFHR2
CAMSAP3
CCT8L2
CCDC88B
TMEM45A
LY86
NCBP2AS2
NCBP2
H2AX
JDP2
MTRNR2L9
POP7
DPAGT1
OR10J5
OR10J1
SERPINB12
OR2J2
KRTAP27-1
SLC13A5
MB
RETSAT
ELMOD3
IQCF2
EVA1C
SUMF2
PPP4R2
RBAK-RBAKDN
RBAK
SFXN4
CDH18
PRAMEF27
PRAMEF15
A1CF
CD7
CABP2
SPDYE13
QSER1
TIFAB
IRF8
GINM1
UBB
SELENOS
UBP1
PPM1L
AGL
DTNB
ABTB1
SMNDC1
TOP1
TEX19
DCANP1
GALC
DPP9
B3GNT2
DUSP22
CENPM
TTLL4
MRM3
GLOD4
ZNF559-ZNF177
ZNF559
CYRIB
CHST10
UBAP2L
C1orf43
JUP
GRIK1
MS4A2
IDI2
OR11L1
BFSP2
ITGB8
USP48
GSDME
MYO1G
MAN1C1
RPS29
TMCC2
RANBP2
NEBL
TXLNA
FBXO6
DDOST
DCXR
HMG20B
MIEN1
PAQR5
NPY4R2
NPY4R
SLC6A3
C9orf131
S100A10
TCF7L1
OR7G2
OOEP
C19orf71
SRGAP2C
ARHGEF18
PLXNA4
CHID1
TNK1
RSPH10B2
RSPH10B
UGT3A1
LOC102723899
RUNDC3A
SNAPC3
ZBED5
ZBED9
DENND5B
CENPF
GPRIN1
ZKSCAN4
F12
CDC42EP1
PRICKLE4
FRS3
BDH1
C2
BASP1
SHKBP1
COA1
CEP164
CYP1A2
SLC28A2
TRIM63
BACE1
SOX13
MAP4K4
HMCES
PROB1
SPATA24
DDX4
SIRT5
SLC41A3
EPN2
SLC25A26
FEM1A
MARCHF6
APC2
DLST
TINAG
FAM72A
RNF8
IFI27L2
TRIML2
FKBP5
MEF2D
MTHFD1L
RHOT1
RNASEH1
TANC2
COMMD2
H3C8
HDAC5
PLA1A
POU6F1
AP2M1
TRMT61B
APOD
DBNDD2
ALG14
NQO2
SRRT
STPG1
NIPAL3
TMEM14A
CHADL
GLS2
RPRML
PGF
DEFB103B
DEFB103A
SLC5A10
ZFP57
SULT1C2
BMP5
ENAH
PARVA
HPSE2
USP25
RUVBL1
EEFSEC
RCN1
FAM228B
H2BC11
PKD1L1
SUPT6H
SDF2
PFN4
CDV3
PARP6
CCER2
KCNMB2
RIPOR3
OR2A14
HSPA1L
HSPA1A
DGCR6L
RETNLB
PI16
ZNF705B
TSGA10
FLCN
ANKRD26
SEMA7A
SPATA2L
C16orf95
FAM162A
CCDC58
TMA7
CCDC51
C2orf15
MAST4
ATRIP
H3C3
H2BC3
GPR142
NBPF7
GOLGA6C
AHNAK2
MGAM2
PSORS1C1
CDSN
CDX1
PRR15
BTBD17
RNASEK
MTRNR2L1
MSL2
CMTM6
ETF1
KLHDC2
UBXN6
CREB5
B3GNT9
SLC11A2
SH3D21
PPP2R1B
MLN
CCDC92B
DNAH14
TMEM200B
PI3
FBLIM1
PLD2
GAL3ST1
AMZ1
NT5C1A
TTC39C
SUN1
SPECC1
ABR
DYNC2H1
ERBIN
ODC1
AMPD3
ENTPD1
PANK3
SAP30BP
RECQL5
MYOM3
STRA8
SLC20A2
TMEM131
DAAM1
PLD6
HNF4G
LTBP1
TRPC1
KTI12
THAP1
FHIT
CLU
ST6GAL1
FER
IL7R
DCAF5
PDIA5
IFT172
CLEC4E
PFKM
CHD1
BLOC1S1
SAAL1
MAPK8
TRIM44
RUNX2
NIPA1
C1QTNF6
WDR46
TAMALIN
RAB1B
ITGA7
ARL17A
PCBD2
DPF3
ZSWIM7
TTC19
TMEM214
FETUB
CADM1
LIPH
TTC23L
GNG3
BSCL2
RCOR2
FAM241B
MYH15
POTEH
HOXB8
GSTT2
EVA1B
MICALCL
TMEM87B
ZBTB7C
IGSF3
PRKCZ
SYT1
PCYOX1L
PGA3
NAXE
GPHN
UNC5CL
TSPO2
PAX7
SFMBT2
C12orf71
PDE1C
PGA5
SPDYE4
GATA5
SFRP5
F2
DDC
HMGB4
PCSK1
ZNF804B
SPAG17
LHFPL3
OR52N5
KRTAP4-4
ZNF214
NLRP14
OR52R1
MBD3L1
KRTAP4-12
GCKR
FNDC4
MDFI
OPRM1
WT1
TRDN
PLSCR5
FAM149A
CREG2
CARTPT
MEIKIN
OR14J1
LEMD1
CYP27C1
ARRDC4
C1orf127
TPD52L2
MAP3K7CL
ZNF671
TWF2
SOX6
JMY
MKS1
LLGL1
LZTS2
SYNDIG1L
NUP50
GOLGA6D
TGFB3
SBK1
IFT43
OR1E2
IL36B
ISLR
TEKT3
OR8K5
MEIS3
PACSIN2
TEX22
RAD23A
LUC7L2
ZMYM5
INPP5B
CCDC146
MTLN
RNF13
ADSL
TTLL9
NPHP1
IVD
ZNF184
CALR
ZNF12
ZBTB32
MICB
TM4SF4
AEBP1
MALL
HOXA10
PPP2R2B
PIRT
HIGD1B
STEAP4
RARG
ZNF565
PPCDC
NPIPB5
BATF
TNFSF12-TNFSF13
TNFSF12
MPRIP
CYTH1
COG2
TSFM
FOXK1
CUX1
GTF2IRD2
GTF2IRD2B
TRIM11
PRKAR2A
SSR2
PATZ1
ARHGAP18
GMNN
TECPR1
TP53
CRYBA1
KRTAP2-4
PVALB
SMIM18
GFRA1
PRKCI
RANBP9
P4HA2
KAZN
SIPA1L1
C6orf89
SPG21
CERS5
ARSA
PLS1
NPTN
FGF18
FBXO9
MMD
ZBTB17
TMEM14B
DNMBP
INPP4A
ALPL
VTI1B
PPIL1
XAF1
SMCP
HLA-F
KRTAP5-11
MTHFSD
SLC17A3
CATSPERB
GPR83
OR52L1
SEMA6C
ATP13A4
OR5F1
TNFSF14
MRTFA
DHX8
ANGPTL6
CCR2
ENTPD5
BBOF1
SEPTIN7
AGAP3
PAK1
POM121
STK17A
ABCF2-H2BE1
ABCF2
BCKDHB
DIDO1
CCZ1B
PHB
RGPD6
SAMD14
SCO1
ADPRM
GID8
ITGB3
TBC1D10A
TTC13
C11orf97
ARV1
RGPD1
AMT
LRRC31
RGPD2
MYLK4
ZC3HAV1
SERINC5
ZAP70
NMNAT2
NCOA6
TRIM21
TMPRSS5
GAREM1
HRNR
CCRL2
AMY1C
AMY1B
AMY1A
CNTN4
NPIPA1
CRHR2
OSBPL1A
SPTSSB
MME
ZNF595
NEURL1
UPK3BL2
B9D1
MAPK7
MPP5
ZDHHC4
HNRNPU
CASKIN2
CUL5
TOMM34
ZBED2
MIS12
DERL2
LRRD1
IQGAP3
MTA1
FAM32A
ZBTB8B
SUN3
FAM83B
PLD5
KRTAP24-1