ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

SPATA4
BCO2
TEX12
EFHB
MGP
SLC4A4
EXD2
UTRN
TMEM212
ZNF541
ABHD12B
WDR24
ANK2
MRPS14
POLR3B
CD28
NCOA1
TAS2R50
TTC5
BTRC
NPIPB11
MYOM3
SMARCAL1
CCDC124
CD1A
HPSE2
METTL25
CCDC59
NUF2
TSHR
FAM160A1
EIF1B
USP30
ZBTB20
STAP1
VTA1
NMBR
SBF2
CLUAP1
FAM8A1
CCDC130
GTF2A2
PIGK
TMEM115
TBL1X
IPO4
MED23
PLCB1
STBD1
MRPL16
DYNC1I2
MRPS23
CAST
UCP3
ITM2B
NUP133
PCDH1
NPIPB8
SUGCT
MPLKIP
NUFIP1
GPALPP1
APBB1
CHCHD3
CLDN12
THUMPD3
TARS3
SYNE1
COMMD1
PPFIBP2
HMCES
KRR1
EVI5
ADAP1
PLCXD2
FRMPD4
CD36
CUEDC1
SNAP29
PI4KA
EMILIN1
PLEKHA1
TADA1
COA6
ZNF529
C4BPB
NCBP3
COPS4
EPYC
HYLS1
C3orf86
ZSCAN31
ZKSCAN3
SYCP2L
RGS1
MFF
LRRC49
THAP10
RILPL1
SYCP3
GPR141
LRRC29
MMS22L
NPAS4
HIF1AN
SIRT4
WDCP
FKBP1B
APP
PROSER3
HSPB6
WWTR1
CLEC7A
SPTLC3
TRIM40
NRAP
MAD2L1BP
GSPT1
ZBED9
NCKAP1
ACVR2A
RSPH6A
ZMYM4
GPN1
CCDC121
VPS41
EMB
RGL4
NPIPB5
NPIPB6
DSTYK
OXR1
ZNF831
CPEB3
KLRD1
RNF149
NPIPB9
GHRL
PSMC2
DNAJC2
CSTF2T
MCTP2
TMBIM4
SC5D
SNAPC3
DHX8
DPEP3
MMP9
DPM2
PLEKHG1
FILIP1L
SLFN12L
ARL5B
NSUN6
COX16
EXPH5
CD55
DEF6
TASL
NLK
EXOC3L1
E2F4
PRKCI
HOPX
HELZ2
SNX12
SNTB2
ARHGAP15
LMO7
GTF2B
CCR1
NPIPB12
SUN1
DEFB108B
SLC24A1
CFAP54
RANBP6
AFF3
ZNF500
PAFAH2
MOSPD3
NID1
TMEM267
GPR18
PDSS2
RIN1
NPIPB4
GRAP2
HNRNPA1L2
NOS1AP
ZNF230
WWOX
FUCA1
UBASH3A
TMPRSS3
PCOTH
MIPEP
ZCCHC14
ACTR6
TCF4
ZNF784
NR3C1
MLX
COASY
IL17RA
TRIP11
H4C4
H2BC6
CA13
TJP1
EPHB2
TSGA10
MRPS22
WDR81
KBTBD6
BANK1
VPS72
PTK2
SDSL
PRDM10
DNAJC5B
NCOA7
WAS
ELAVL3
FAM184A
MAL2
OR8D4
KIF13A
SYS1
NET1
SMYD4
RPA1
DEF8
SLC26A11
TNFAIP8L2-SCNM1
TNFAIP8L2
NEGR1
TPM1
GTPBP10
SLC12A3
COL3A1
GPR65
ARL6IP1
MRPS18C
HELQ
THAP12
GVQW3
PGAP1
SRM
FCER1G
NPIPB13
RAD18
RFFL
FRA10AC1
TNKS
LRRC59
CSDE1
ARL14EP
KLHL20
BLVRA
PLD4
LTF
HKDC1
APOOL
CD101
ANXA1
SHQ1
UTS2B
CCDC50
KDM3A
ERBB2
RGS14
JAML
ZNF350
ILF3
ZNF397
TTC21B
PDGFB
VPS29
RAD9B
TTC21A
GORASP1
CANT1
JSRP1
ANKRD13C
TBL1XR1
OR4D11
METTL15
KIF18A
ERO1A
TTC33
DOHH
NME7
BLZF1
ABCB1
CHFR
NBPF15
SPOP
TIGIT
ZNF302
PIGX
CEP19
SACS
LY9
ELP3
R3HDM2
WDR47
CHCHD2
DMWD
KDM8
CLN3
APOBR
TPR
ODR4
ZKSCAN4
AARS2
EIF2B5
CNTRL
CCR2
TRIAP1
ENPP2
MGAT5
ATP12A
NUGGC
ENPP5
TFPT
PRPF31
CYP51A1
KLRK1
C5orf34
MEGF8
BRIX1
LARGE1
FAM126A
ATP5MC2
RPA3
SAXO1
RRAGA
AKAP9
CNTN1
CATSPER4
ARIH2
VPS26B
NCAPD3
ZNF19
PRPF40B
FASLG
TSACC
CCT3
INAVA
NAT10
PEX12
CAND1
NSFL1C
EVC2
EVC
LONP2
ABCC11
COMMD2
C1orf127
CTTN
SLC31A1
FKBP15
FAF2
CRNKL1
CFAP61
TFAM
TNIP3
H6PD
SORT1
NT5C1A
SIRT1
RNF139
REXO2
ZNF501
IL1RN
RPL11
TRIP4
SAA2-SAA4
SAA2
RPS8
NOXA1
EFNA4
NBEAL2
CCL15
INTS10
TMTC2
ZBTB45
IPCEF1
LTA4H
PSMC3IP
ZSWIM6
PLEKHA6
SURF6
SIKE1
RAB3GAP1
COX6C
CCIN
CHRNA1
ATP5F1B
LGALS2
RAB38
IL33
CFAP20
SLC17A1
WHAMM
FSD2
SLCO3A1
HECTD1
RIN3
SEC22B
C1orf105
FOXJ3
SFXN5
FBXO8
CEP44
PHF20
USH1G
OTOP2
COPZ1
LRRC34
CYP26A1
RNF151
TBL3
CCDC30
NR4A1
FCRL4
SEMA4D
POGLUT1
TMEM39A
SEC31A
THAP9
P2RX5
NPIPB3
COL16A1
STAU1
MICOS13
HSD11B1L
H4C3
H1-6
NLE1
CCDC146
DPY19L4
SLC38A9
RBBP5
TOX2
ULBP2
EIF2B2
RANBP9
UBQLN4
LAMTOR2
IFI16
NEURL3
LIN54
TTLL12
CCR5
TMEM229B
XPC
LSM3
ZNF563
DDX27
EGR2
SSH1
ARHGAP30
ABHD2
CDH1
PTPN22
SDAD1
TTC7A
MCFD2
CDADC1
CD2BP2
TPH2
KIF21B
STK11IP
COPS8
INTS12
GSTCD
CBLL1
RERE
POLR2C
ZNF705E
THOC1
APTX
RCC1L
ZNRF1
MDM4
OGG1
FBXO17
CARD8
TTC39C
SPECC1
OCSTAMP
ATP2C1
PRDM1
C2orf42
RHEBL1
NEIL1
TMEM262
ZFPL1
CDCA5
MS4A15
CLIC3
LOC645177
C12orf77
NCOR1
PIGL
DYNC2LI1
CHPF2
ABCF2-H2BE1
ABCF2
RAB4B
MIA
ZNF718
ZNF595
GTF2F2
EXOSC9
ADD1
CXorf56
TM2D1
TIMM17A
MEF2A
TARS2
RNF19B
PSENEN
IGFLR1
RABGAP1L
SPTY2D1
G0S2
ASAP1
TAGAP
MACROD2
CBR4
GPR171
RRM2B
MZF1
C12orf43
TBC1D25
MCC
AP2S1
GPR35
KIAA1217
DDX60
YIPF2
TIMM29
CD209
BCL2L11
LILRB1
ECI1
FXR1
SPATA6L
PLPP6
KCNE2
CTLA4
FFAR2
CSNK1G3
UTP11
ZBP1
DNAH8
C2CD2
TSG101
UPP1
CCM2
ITGB3BP
EFCAB7
MRPL21
IGHMBP2
PSIP1
MAFF
ZNF148
HSBP1L1
HSPA5
LMO2
SBF1
CEP85L
TENT4B
FCAMR
ADCY4
UBL5
ZFP3
GTF2H3
EIF2B1
LATS1
ITGB1
CD38
RAD54B
FSBP
DYNC2H1
MRRF
NLRX1
CHIC2
PCDH8
ZBTB43
ATG5
SREK1IP1
CWC27
RAD54L2
CPSF6
LRRFIP1
TEX44
ECSCR
RPL22
SNRPB
NFKBIZ
TTF2
PLD3
DUS3L
ZC3HC1
STK19
DXO
CYB5R2
TBC1D19
PDE2A
FAM234A
MRPL53
ASB17
CPPED1
SSH2
DDX4
CCDC9
RPS3A
ZNF224
RPS7
FLCN
TP73
NELFA
MAP7
EML2
CD22
ACSF3
GRHL3
BATF
ITGAE
AIM2
TNPO1
LYRM1
DCUN1D3
FLYWCH1
IDH3B
HNRNPLL
TUBG2
TPD52
ST3GAL5
BCL2L1
CDCA7
WNT1
SNAP23
ZNF106
SORBS1
CYP20A1
SPATC1
ADGRG5
TIMP1
RBM25
WDR36
EXOSC4
GPAA1
DEPDC7
TEX46
KDM1A
ZNF791
ZNF490
KCNJ15
HIF1A
CCL26
GBP6
CD37
TBCB
POLR2I
OVOL3
EPRS1
FAM118A
ZNF225
SRSF5
RXFP3
FAM185A
NAPA
OR6K3
PPP1R3B
RXRA
NDUFA4
CCNI
RPAIN
NUP88
NFX1
BIRC3
SYAP1
BCL3
SUCLG1
HELB
FOXO3
TDRD7
ZCCHC9
WDR70
LMNA
ARHGEF3
SPDYE17
AGPS
CCDC115
DYNLL1
AMZ1
STX18
KANSL3
FER1L5
ZP3
PRND
HILPDA
DMXL1
PPIL2
ESR1
FBRS
INPP5B
ARL5A
VIPAS39
AHSA1
GPR68
ELF1
OR2T1
TMX4
SMARCC1
PPP6R3
TMBIM1
ZNF561
CISD3
TUBB3
MC1R
TPST2
DPH2
B4GALT2
ATP6V0B
ZKSCAN2
PUM3
AMHR2
DPP9
CKAP5
CLPB
SPDYE3
ZNF181
PRSS55
SPINK2
CXorf58
MTF2
NDUFAF5
ESF1
PSD4
CLEC2D
RAD23A
NDUFB6
LCP2
DHX36
NOP53
LBH
ING4
TMEM116
ERP29
SEC23B
RGL2
PALD1
SYNPO2L
MMUT
CENPQ
RAB31
TNFRSF14
ZNRF2
RCC1
MS4A6A
PLEKHG6
SIAH2
DARS1
MRPL3
MIS18A
HTR1A
ABLIM1
IGF1
HECTD4
NDUFA2
IK
TSNAX
TIMMDC1
MGAT1
KANSL2
ABCB6
GSPT2
THEMIS2
ZNHIT1
PLOD3
NIBAN3
FCRLB
CX3CL1
CELF2
COG7
RPP14
HTD2
ILDR1
HMGCL
CCDC97
NIF3L1
PPIL3
TRIM13
PRPSAP1
PTPN4
SPRYD4
ZNF3
MAML3
MAP3K7CL
FLVCR2
NUDT7
CCT8
HTR5A
ADIPOR2
SEMA6A
CDH17
RAB22A
KCNK2
ODF3
SCGB1C2
SCGB1C1
SKA2
PRR11
DNAJC19
SUPT4H1
EXD1
CHP1
GRIK4
PLEKHM3
CHST12
PPA2
TMEM9B
SNRNP48
GSK3B
KAT7
PPP2R5E
ITGB8
EMP3
CCDC114
C8orf37
SF3B5
NFE2L1
GP1BA
CD5L
KCNJ5
RTTN
ADGRF3
SELENOI
PREPL
CAMKMT
PNPLA1
AP2B1
SLITRK3
TAF7
GGT5
ATP6V0A1
CLASP2
TMEM33
PPP1R16B
NCF1
C5orf51
IFFO2
IFNA2
DHTKD1
NDFIP2
SF3A3
OXCT2
CCNL1
AP1G1
PTPN7
LUC7L2
LINS1
GDF15
FMC1-LUC7L2
FMC1
GCFC2
PMCH
CWF19L2
CD226
FNTA
PRPSAP2
FHIT
FASTKD1
SNX20
HMSD
SYT12
DCAKD
NMT1
SLC66A1
AKR7A2
RFC2
SCAMP2
STYK1
DRAP1
C11orf68
TES
RAD51
HDAC9
TM9SF1
PRKD2
RPA2
FAM76B
CEP57
DEXI
CLEC16A
NAA35
TRMT10A
MTTP
ARMC1
RPL31
LARP4B
IDO1
MAP2K5
SLC39A8
HMGN4
RARG
RMND1
ARMT1
GCNT1
B3GALNT2
CFP
MTIF2
ETFRF1
CFAP94
DDX23
NUP214
NOTCH2NLC
NOTCH2
HHAT
PITPNC1
ZKSCAN8
CIPC
TRMT6
MCM8
ITGAX
MACO1
SNRNP70
ZNF599
ZNF732
PRAG1
TICAM2
FIGNL1
WDR77
ATP5PB
LAMC2
HES1
NFKB2
DCP1B
TOMM5
CDK14
TRAPPC2
OFD1
CMTM6
ASNSD1
ASDURF
ZSCAN12
NUDCD1
PDXK
RAB43
DEGS1
GALNT5
PIGBOS1
PIGB
RACGAP1
YES1
LOC391322
CIAO2B
CES2
E2F2
TRIM46
KRTCAP2
MANEAL
SUCLG2
PIKFYVE
CLCC1
RGS3
SHBG
SAT2
H4C5
H2BC7
ELK3
NUCB2
TMEM8B
FAM221B
ZMIZ2
SHISAL2A
YARS1
S100PBP
NTRK2
RUBCNL
MTLN
RPL29
EMID1
LNPEP
TP63
ARHGEF9
PRPF18
SLC37A1
TSFM
DYM
GSDMA
CCDC117
MANBAL
NKG7