ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19719541 | NK-92
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◣ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

FRG2C
DUX4
FRG2
CCDC200
KMT2A
COL23A1
CYP51A1
VPS36
CKAP2
LNPEP
FRA10AC1
MYEOV
FAM243B
FAM243A
VPS37C
NKG7
CLDND2
ETFB
RIOK1
CAGE1
SNX16
ZNF821
MUC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FAM8A1
RUNX2
BTRC
NOTCH2
ZZZ3
CFLAR
NCOA3
USP17L22
USP17L20
GALR1
PIK3R2
DMWD
WDR24
EIF1B
PHLDA1
ZNF341
SLC3A2
FAM76B
CEP57
PTPN12
TLE4
RUNX1
ARHGAP39
RASA1
TTLL12
IGFBP7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
OR2T1
PDAP1
BUD31
MYCBP2
ZNF500
RIN1
LYRM4
FARS2
GSPT1
SLC39A13
UGCG
TOX2
SRSF5
NSFL1C
GZF1
C6orf62
NSMAF
ZNF318
PABPC1
HOOK2
ACY3
RUNX3
MRPS23
FLOT2
DOHH
COA6
GTF2E2
LRRC8C
TRIAP1
ABLIM1
ICE2
DSTYK
ZBTB45
NFE2L1
NR4A2
RPS3A
DENND2D
RNPEPL1
ANKMY1
NAA16
MTRF1
PSIP1
AP1G1
GTPBP8
CCL18
NTRK2
TASOR
BCL3
RETREG2
CNPPD1
FAH
UPF3A
USP30
GTF2A2
ARID5B
RIC1
MLLT6
AKAP13
XCL1
NUF2
AGTRAP
SDCCAG8
CEP170
BZW1
EMP3
CCDC114
GABPB1
ANKRD46
ZMYM4
ATAD2B
ARHGAP30
MAD1L1
ZBED5
TLN1
CREB3
PPIB
ZNF22
PPM1A
BHLHE40
TPR
ODR4
C5orf51
GCLM
ZNF398
GSK3B
CCL3
SBF1
GFRA4
KCNA3
SSX2IP
ANXA2R
ANXA5
SUGCT
MPLKIP
PRSS38
ZNF302
DCLRE1B
AP4B1
PCNA
ESYT2
MRRF
FAM3C
RBSN
TMEM39A
GPAT4
PARP4
RTP5
SNAPC3
CLN5
OGG1
CD1A
SLC17A7
OSBPL8
HDAC10
SLFN13
OSM
SAC3D1
NAPA
NUCB2
MYH9
HECTD1
DIAPH1
RRM2B
HARBI1
ATG13
RERE
ADGRG5
RAB4B
MIA
P2RX5
FAM160A1
CD37
DNAJC5B
SRM
PTK2
EMID1
SBF2
EGR2
PLEKHA1
GPR68
HELZ2
ATP12A
HNRNPLL
LMNA
PTAFR
RYK
ABHD12B
CLCF1
SUCLG2
CD2BP2
GRHL3
IFFO2
PTPN6
IFNLR1
SYTL3
ZNRF1
HYLS1
RAB3GAP1
ITGAE
ASB2
DEF8
CHST12
IL17RA
UPP1
WDR74
NIBAN3
SLC2A5
MCTP2
CTTN
FCER1G
TTC21A
GORASP1
ARIH2
SMYD4
RPA1
SYNE1
PPFIBP2
TMEM229B
EPYC
VOPP1
WDR81
ALCAM
SPATA4
ADAP1
GPR35
IFIT3
IGLL5
DDHD1
CD28
RFC2
ARID5A
LCP2
LSP1
CCR1
CYP1B1
IL19
CTSZ
TUBB3
MC1R
IL10
GNA13
HSH2D
FGF2
TSHR
MPEG1
BLK
HMCES
KIF13A
CLN3
APOBR
MAD2L1BP
KMT2E
KLRD1
PIK3CA
FCRL4
NCKAP1
SMIM3
AFF3
HES1
TMEM109
LYL1
CLIC3
PRPF19
FBXO17
AMZ1
LGMN
ZBP1
WNT1
SELPLG
NT5C1A
ESR1
PDGFB
FLT3LG
SERF2
YARS1
S100PBP
PLCB1
LMO2
CUEDC1
PLEKHG6
MACC1
DOCK10
DDX3Y
UTRN
TUBG2
BAIAP2
SEMA6A
ELL3
CXCR3
DGKD
BANK1
JAML
STK17B
SPRED2
CFAP54
LTA
TIGIT
CD209
PLEKHG1
LARGE1
SNTB2
CCL4
SMG6
ASAP1
LZTFL1
LDLRAD4
PIKFYVE
TADA1
NFKBIZ
HSBP1L1
ZNF791
ZNF490
TTC39C
MAP1LC3B2
ITGB7
RFFL
FCER2
C1orf127
PARP1
RHEX
RABGAP1L
OXCT2
APOBEC3B
DMXL2
JAG1
FCRLB
GRAMD2B
SYCP2L
RFTN1
RNASET2
NDFIP2
LAMP3
PDE2A
RGS1
ATP2C1
LIMS1
DYNLT1
GPR132
BIRC3
PSMC3IP
STBD1
ZNF541
MFF
UHRF2
APBB1
CNIH1
FASLG
PIGV
DBNDD1
TENT4B
SEC31A
SH2B3
TMEM116
ERP29
TSACC
CCT3
SNX20
MGAT5
E2F7
PLD4
SMARCAL1
FAM234A
ANXA4
SEC14L1
THAP9
ABCD2
SUN1
MGAT1
CAST
DERL1
SYPL1
THEMIS2
CD226
CCIN
AAK1
BCL9L
DEFB108B
BCL2L11
ARID3B
RASGRF1
SLCO3A1
SPTY2D1
TJP1
EFHB
IL4
RAD52
LAT2
ACSS1
ZSWIM6
TARS3
ARHGAP31
RASSF2
AMN1
SLFN12L
NPIPB6
NRROS
TACC1
TMEM41B
RPRD1A
NME7
BLZF1
KANSL1L
NOP53
NCF4
PARVB
SIT1
LRP12
MSGN1
ARL5B
ICAM1
TAGAP
CX3CL1
RAB38
CMKLR1
ZNF705E
MARCKS
CD82
B4GALT1
WDR41
ASNS
ABI1
SIRT1
SPINK2
CD55
NSUN6
ODF3
FUCA1
RNF125
KCNJ15
SMARCC1
STRADA
ARHGEF3
ECE1
ACTR3
FAM118A
SPOP
CYFIP2
ITCH
FRMPD4
ENPP5
CD38
PPP1R3B
SPON2
GRIK4
MEN1
AKNA
ST3GAL5
TIMM17A
BCO2
CREB1
GPR141
CEP68
MAP2K1
SCAMP2
FHAD1
SCGB1C2
SCGB1C1
CELF2
C3orf86
CORO7-PAM16
CORO7
PKM
CLUAP1
PDXK
TNIP3
CDH17
ADORA2A
LRRC32
SHQ1
TSGA10
FILIP1L
NPIPB9
RARG
IL6R
ITGA4
CLIC5
LOC102723996
ICOSLG
HGSNAT
EMILIN1
TNFRSF13B
CDH1
NPIPB8
NLK
TRAF3IP3
NPIPB11
CD59
TPST2
USP6NL
GCNT1
ZPBP2
IKZF3
SPECC1
SMAD3
NUGGC
TNFRSF14
WHAMM
NLRC3
LOC283710
ZCCHC14
TAS2R50
ELF2
SLC4A4
PRODH
LOC102724788
DUSP2
SLC26A11
ZNF397
EHF
TBC1D22A
ECSCR
RIN3
RAB11FIP1
UCP3
RARA
MAPK1
DPEP3
ZYG11B
ITGAL
PIGX
CEP19
AFF1
FKBP5
C9orf72
TFAM
EVL
GALM
IL6ST
COPS4
LILRB1
WDFY1
TRIM8
EHBP1L1
ZFP69B
FLOT1
C1orf162
KRI1
ZFP3
ACTG2
GPR65
XRCC5
H6PD
CSK
ATP6V0A1
HPSE2
GRN
SMIM14
ARF6
GPR171
CD101
PSD4
EXOSC4
RSPH14
TOM1
CDKN2D
ZNRD2
KSR1
PRPF40B
TYW3
CRYZ
VPS26B
NCAPD3
KLRK1
C2CD2
CCDC126
SEPTIN9
HINT2
APELA
CLCC1
ARHGAP45
EVI5
ELMO2
RGS3
TMBIM4
TLNRD1
FSD2
RXRA
RAB43
TLR10
FAM89B
WDFY4
CBLL1
ENPP2
SH2B2
TPD52L2
AP1S3
PPP1R9B
TNFRSF17
NPIPB2
IL2RA
SPAG8
CLEC2D
GPAA1
TP73
RNF139
OCSTAMP
FCAMR
GABARAPL1
CHIC2
CCPG1
C15orf65
SSH1
MS4A1
CLDN12
TEX12
CD72
PJA2
RMND5B
PROB1
CLEC7A
CCDC130
ABR
EHD1
IFNA2
ULBP2
EPHB2
NINJ2
NEIL1
GPR82
NEK6
CYS1
AIP
ABHD16B
BHLHE23
ZP3
ANKRD13C
NAGK
SNAI3
SLC1A4
TMEM104
NAT9
TNFAIP8L2-SCNM1
TNFAIP8L2
FILIP1
INAVA
IQGAP2
CD86
PDLIM1
AICDA
LRRC34
PCED1A
KDM8
SORBS1
TNFRSF10C
ADD1
TMEM212
EMB
TCF4
STING1
PTPN22
F2RL3
CCL22
DSE
TSPAN5
SYT12
POLI
TMEM138
CYB561A3
EVC2
EVC
OTULIN
VPS16
ABCB1
DCAF12
BPHL
CCDC117
SYS1
IL16
SKIL
ZNF718
PRKD2
MZB1
FLCN
IPCEF1
CD1C
PKIG
ACTG1
CCDC124
CRYM
TRIM7
ARHGAP25
THUMPD3
RGS14
TLR1
SMAGP
AIM2
ZFP36L2
PCDH8
WWTR1
ZNF565
NCOA1
GHRL
ELAVL3
ZMIZ2
RNF166
RASSF5
TMBIM1
RHOH
TTF2
SLC43A3
KCTD6
CD79A
GNA12
AP4E1
RAD50
NEGR1
ACAA2
METTL7A
RAD54B
MAPKAPK2
LASP1
IL4I1
ARSB
SMPD1
PARP15
KCNJ1
IL1RN
PPCDC
TNK2
AGO3
KLHL29
SS18
NBPF15
GPR55
FOXO3
UPF2
MYL12A
CA13
VTA1
NMBR
PCM1
RBM6
HSPA4L
HLA-DMB
PPP1R16B
TCTEX1D2
TRAF4
PLD3
EPB41L2
RNASEK
ZGPAT
ARFRP1
TTC7A
MCFD2
SACS
NTMT1
GPX4
BCL2L13
FSBP
A4GALT
CBLB
HMGCL
RBM43
PDE4A
CPPED1
ABCA7
AP2A2
GCFC2
OXR1
LARP4B
HIF1A
NADK
MAML3
FGR
BCL2L1
SLC25A37
TNKS
MBD6
DDIT3
DYNC2H1
KDM7A
MXI1
FBXO10
DEPP1
ZNF595
TRIP11
TBL1X
PRND
HHAT
ZNF799
ZNF146
ITGB8
TSC22D2
B3GALNT2
IQCC
PICALM
IL21R
IDO1
C17orf49
SAMD10
PRPF6
SLC25A13
TMEM147
SEC23B
NR3C1
CNPY3
CNTRL
TRMT6
MCM8
ATP13A2
NPIPB4
DCAKD
EIF4ENIF1
HKDC1
WASL
KIF21B
NMT1
TNFSF14
RGS12
BOD1L1
RILPL1
CDK13
NPIPB5
HNRNPUL1
NPIPB12
MAP2K5
GSTP1
ERBIN
IGF1
SLC35C2
BRIX1
SC5D
GLIPR1L1
CAPS2
RNF213
SPDYE13
CD300A
ARL6IP1
RALGDS
SYAP1
SPDYE9
SPDYE8
SPDYE15
SPDYE11
CCDC28B
NDUFA4
BIRC2
DPY19L4
NRAP
NAT10
CCNI
FAM184A
TYROBP
LOC645177
C12orf77
NFKBID
HCST
ELK3
ITGAX
KDM4C
PCMT1
LCP1
BATF
ADGRE5
FRMD4A
RIPOR2
LY9
TBC1D5
ACVR2A
ERO1B
TNFSF10
ZNF529
CCDC88A
SIKE1
SLC35B3
FCRL6
C5orf34
QSER1
CD47
FUS
TNFSF12-TNFSF13
TNFSF12
SPATA6L
TMEM123
GPN1
CCDC121
P2RY8
CCL15
NANOS1
SLCO4C1
NEURL1
MVB12A
BST2
ATF3
ARHGEF7
USP48
MTG1
CARMIL1
MOSPD3
CPEB3
AGPAT3
HOMER2
NET1
LYSMD2
FTH1
SLC31A1
FKBP15
CYP26A1
ITM2B
DEGS1
TARS2
DSCAML1
RNF19B
MYB
SOWAHD
RNF149
RAD51
NAA50
ATP6V1A
MDM2
GSR
SFT2D2
RPL22L1
LBH
MX2
XPC
LSM3
SOCS3
TAGLN2
RAB22A
HECTD4
SFT2D3
PRKCI
CCR7
BUB1
PLPP6
MFSD3
MEF2D
IGSF6
GPT
SPDYE17
MKRN1
GRAP2
SYNE2
CAMK2D
PDGFA
CLECL1
SCD
AGRN
BNIP3
AKIRIN2
LACC1
CCDC122
TRIM2
TMEM37
NOS1AP
YAF2
TP63
MBNL1
FAM47E
CEP83
TIPARP
PROSER3
STK11IP
TPM1
CSNK1G2
ZFP91
PPA2
LPXN
NCOR2
NID1
GP1BA
ASB1
ADA2
PIMREG
TFAP2A
CTDSPL2
TNIP1
KIAA1217
CARM1
PRDM2
MTHFD1L
MMP9
SPAG1
RLIM
GADD45B
NEDD9
LTK
NBEAL2
OGFRL1