ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1393087 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◣ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

NKIRAS1
NR1D2
TEF
AGAP11
PER2
PER3
DBP
CPEB1
CRY2
BHLHE40
LAMP1
MTHFD1L
RALGDS
ANKRD12
GET4
KLF11
NR6A1
CRY1
CIART
PLD6
KAT5
CDK4
CLUAP1
TRAPPC6A
BLOC1S3
NPTN
RORC
PIP4P1
SNRPE
NR1D1
NOL8
CENPP
EIF5A2
RAD9A
SLC35A5
ATG3
PFDN4
YPEL5
TMEM116
ERP29
COMMD8
LRRC56
PTBP1
KHDRBS1
BCAS3
OSGIN1
MAPK6
PLEKHF2
RNF43
CLN6
HPS5
GTF2H1
CLCN7
HOXC13
TXNIP
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
GTF3A
DDX5
CEP95
ERCC6L2
OSGEP
APEX1
MTHFR
CLCN6
ZNF292
STX4
RBM39
AVPI1
UVRAG
SLC20A1
DHX35
ARFGEF2
ARRDC4
USP32
VPS11
UBE2B
CDKL3
EMC2
VPS26A
RNASEK
MAP2K7
HIF1A
AP5Z1
DAZAP2
SPG21
ISOC2
CDK12
ILF3
CCDC85B
DDX42
CCDC47
FNIP1
PPP1R3C
S100A13
CHTOP
WASHC2A
HES4
APPBP2
SNRPA
C19orf54
DENR
PHKG2
LRATD2
SLC25A13
INAFM1
SERF2
CAMKK1
PPM1D
TRAPPC2L
GALNS
RFESD
PNPLA7
G3BP1
EIF3B
PMS2
MRPL40
HIRA
AIMP2
PC
FAM117B
WASHC2C
ZNRF2
RPUSD4
FAM118B
SLC33A1
MORF4L1
UBAP2L
C1orf43
IFRD2
ALG13
CREBRF
GMFB
CCDC24
NUDCD3
SRP54
UTP18
SPNS1
MBTD1
CEP63
ANAPC13
WDR62
THAP8
SLC35B2
PRORP
PPP2R3C
KMT2E
PRDX6
ZNF331
MAPK1IP1L
NME1
BRIP1
TMEM185B
NCOA3
B3GNTL1
PRKAR1A
TIMM22
ZNF438
DPP3
SDR39U1
SRSF1
HBP1
ZNF263
GTF2A1
RCCD1
TRMO
XPOT
ATP6V1H
ADNP2
RRAGC
TRIQK
CSTF1
AURKA
HMGB2
TOB1
COQ10B
NFX1
FLCN
HERC3
GSK3B
SLC25A36
GYG1
LRFN4
SRSF5
CHFR
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
CLTC
TMEM18
USP36
GBE1
IP6K1
TUBD1
RPS6KB1
TPD52L2
YDJC
PPP1R3D
GCDH
FAM217B
TCF25
FAM214A
UBE2Q1
PER1
CCNL1
ARRDC3
NEURL2
CTSA
DACT3
CUTA
RAB17
ZBTB37
MEA1
ZNF706
DHPS
PDE12
PTCD3
POLR1A
PUM2
NRAS
EPM2A
COX14
SNAP29
PI4KA
SRCAP
LOC730183
SENP8
MYO9A
SEPTIN2
HDLBP
CLN3
MADD
SCAF11
TLE6
SUMF1
STAT6
THAP5
DNAJB9
RNF13
PAF1
MED29
KDM4C
GGA2
MARCHF8
ZNF687
NBN
HNRNPF
ZC3H4
EIF1
RMI1
HNRNPK
FAM214B
EED
SLC25A26
FZD1
BLVRB
BCLAF1
NAA50
ATP6V1A
MYL12A
THNSL1
RPS11
ZZZ3
POLI
PPAT
PAICS
HEXA
AKT1S1
RRAGB
CENPN
G6PC3
COMMD9
PPFIA4
HSF2
COL6A1
TBCEL-TECTA
TBCEL
RMND1
MVB12A
HCFC1
ARMT1
PSMD6
H2BC12
H2AC12
SPTBN4
NTMT1
NFYC
ARIH1
UCP2
WDR74
TCERG1
TBC1D17
EIF4B
CHMP2B
EPB41L4B
MED13
ZCWPW1
MRPS23
MEPCE
CD164
ATP6V0B
UNC13D
SLC35C2
SETD1A
FNBP4
RFX3
UNK
PARD6B
NOP14
GRK4
SULF2
SNX5
MGME1
MTCH2
TM9SF1
DHX40
SLC3A2
TMEM141
RIMBP2
WTAP
SOD2
BRPF1
LAMC1
CDIPT
SLC25A25
NAIF1
DGAT2
TENT5B
ZNF335
TRIM8
CASC3
YEATS4
CD55
HNRNPA2B1
CBX3
TIPARP
SRP9
ISG20
EXOSC5
BCKDHA
ATG101
MCM7
AP4M1
LARP1
BAX
RNF223
DHODH
HNRNPH2
GLA
H4C14
RPSA
PRKCI
INO80
GABPB2
CFAP251
HDAC4
EIF4A1
TUFT1
COLEC11
CAP1
CLN8
CCDC107
SPPL3
PPP4R3B
CNNM2
VPS33A
ESYT3
POLR1D
LNX2
ILVBL
ITGB1
RBBP5
ZFP91
HSPBAP1
PDXDC1
MAL2
KAT7
CLK1
SLC35A4
APBB3
CTDSP2
ADK
TMEM53
ARMH1
PNO1
ENSA
CENPA
DDX3X
TUBA1C
YARS1
S100PBP
MOCS3
MAX
DPM1
SREK1
STXBP4
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
MZF1
CCDC114
NAPA
CIPC
SLC43A2
ZFP1
PCBP1
RBBP6
WDR89
TADA3
ARPC4-TTLL3
ARPC4
DDX59
SKA2
PRR11
YWHAZ
NR1H2
XRN2
VMP1
TBC1D13
PTRH2
TMEM187
SLC25A24
PPM1A
SLC39A6
ELP2
TRIP6
THRAP3
L3HYPDH
JKAMP
EIF4G1
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
TMCC1
LAMTOR4
EIF5
SLC25A11
RNF167
RPS29
HEXIM2
TUBA1B
RNMT
FAM210A
PRC1
ECH1
PPP1R13L
POLR1G
STAM2
FBXO5
SPATA2
LPXN
DFFA
TJP2
PDP2
MRPL36
BCAS4
STMN1
LUC7L2
KPNA2
MLH1
EPM2AIP1
SGO1
SLX1B
SLX1A
COPS7A
BOLA2B
BOLA2
SMARCD2
TBC1D15
UBR5
BCL6
PIGO
ASPH
SON
GART
PDCD6IP
AMDHD2
PTP4A1
ZNF219
PPIA
PRKDC
MCM4
STX6
EIF3E
GPBP1
DDX43
NPM1
ANAPC7
GREB1
NSUN3
DHFR2
MTRNR2L8
TRIM59
COX19
SLC25A19
FAM53C
CSRNP1
CDC25C
TRMT112
SLBP
PRDX5
USP9X
HNRNPA1
CBX5
TARDBP
TATDN2
HIRIP3
UBQLN1
SCAF1
RRAS
PPP2R5C
USP48
CHKA
RNFT1
PABPC1
H4C15
ATIC
AEN
RBM3
SLC2A4RG
PSME3
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
TBX2
DPH1
RLF
PAK1IP1
JUNB
HES1
C6orf52
ZFP62
ATF7-NPFF
ATF7
FBXO33
OSGIN2
DNAJB1
ERGIC2
ALDOA
ADGRE5
NAA38
DDX23
CYB5D1
TSTD2
NCBP1
UQCRC2
RIPK2
PCNT
C21orf58
CACYBP
IREB2
STX16
BOLA2-SMG1P6
PCIF1
MCCC1
SNX16
ARL4A
TMED10
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
WDR6
ZNF217
PES1
DCBLD1
PGP
PPP1R15A
POLR2J3
ZNF384
SRRT
LTV1
SMG9
RNF31
PSME2
BCL9L
FAF1
FAF2
SPTSSB
DUSP1
ARF6
SERINC3
PHF12
GOLIM4
ELOB
OGFOD2
U2AF2
PLEKHG2
MBNL1
SPAG9
TFAP2C
SLC35B1
TOP3A
SMCR8
TANC2
SETDB1
KIFC1
RCE1
MXD3
KHSRP
TRA2B
CHMP3
STK35
TIMM44
HSPH1
PSMC5
FTSJ3
AHI1
TAGLN2
HNRNPD
SLC49A4
CYC1
ZBTB7B
GMNN
TIPIN
TEX14
RAD51C
PIK3R3
CCDC6
ZNF24
TREX1
LAMTOR1
KIAA0895
APH1A
ANLN
METTL1
EEF1AKMT3
METTL23
JMJD6
DNAJB5
DNAJB12
SYT1
SRSF4
PIGW
OSBPL1A
MYO19
SOCS5
RITA1
KPNA3
DDX54
ZNHIT1
TSPAN31
PLOD3
SPATA17
RRP9
PARP3
GPATCH2
NOP58
HNRNPH1
SIRT4
PNISR
DUS3L
EGR1
PPIL3
NPC1
NIF3L1
NCAPD2
MRPL51
RPS19
DVL2
SYNRG
RABGGTA
PNPO
SLC25A10
PPP1R15B
JADE2
DDX6
TET3
PPP1R10
MRPS18B
AIG1
FAM86B1
TMEM251
MOAP1
PRMT2
TOR1AIP1
TNFRSF12A
SUPV3L1
DDIT4
HNRNPA0
PAIP2
KMT5C
GOLGA5
CIC
CANX
C17orf58
DYNC2I2
SERTAD3
SARAF
LYRM1
IQSEC1
CC2D1B
ZC3H11A
SESN1
NUP188
DOLK
CEP57L1
SENP2
AP1G1
CHD1
SPATC1L
SERPINE1
MAF1
ZAR1L
SF3B4
LRPPRC
BRCA2
ALOXE3
COPS3
NAB2
MED1
SOX12
HIPK1
BRD2
TAX1BP3
KRT80
HSF1
EMC6
BOP1
RPL27
PPP5D1
CALM3
BFAR
PDIA4
UBE2M
GABPB1
NCL
ZNF408
GPRC5A
DARS1
ARHGAP1
PDPR
LIN54
SLC35E2A
C3orf14
GNB2
DCLRE1B
ARF3
AP4B1
ORC4
MBD5
FMC1-LUC7L2
FMC1
ZNF57
SMC4
MDM2
IFT80
TSPAN4
AMOTL2
CAD
KRT8
C15orf39
C14orf93
DUSP7
TBL1X
RPL10
RBM8A
ZNF286A
TSPYL1
ST20-MTHFS
SLC30A1
DSE
CBLL1
TANK
PMEPA1
MICU1
ZBTB8OS
RBBP4
NAT10
DOP1B
PLK4
MBTPS1
PKNOX1
NOL11
C1orf174
ETF1
DMTF1
C5orf51
PPP4R3A
LRP10
DUSP28
ANKMY1
STAG2
TFDP1
TOR3A
TAF9
RAD17
AK6
UBE2T
SRSF7
RSL1D1
ATP6V1G1
MTMR14
CEP152
ATP5MC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DCUN1D3
ANKFY1
ZBTB10
ZBTB21
MAT2A
FUBP1
DNAJB4
UBC
WDR81
PSMD9
PMVK
MFSD4B
HPD
TRIM52
ICAM5
H3C15
H3C14
H2AC19
H2AC18
GABPA
ATP5PF
NDUFAF5
ESF1
SBDS
POP7
ZNF778
TNPO2
LONP1
CNPY2
CATSPERD
BRWD1
UBE2D3
KIF22
FANCC
PNRC1
TAF7
LOC114841035
FKBP2
RBM15
NCBP2AS2
NCBP2
TMEM151A
SRSF6
FOS
ACAD9
STK40
RNH1
OPLAH
TPT1
ZZEF1
CYB5D2
CAMLG
TSC22D1
PHC3
SYVN1
CREBZF
BHLHE41
BCAS1
NOCT
DOK7
GNAS
KLF10
TDRD1
SLC39A4
HSPA9
HPSE
MYDGF
COQ7
CSE1L
XKR9
LACTB2
ZNF672
RACGAP1
NPDC1
KEAP1
RPL15
MED15
PTPN1
NQO1
CBFA2T2
LEKR1
CCNB1
WBP1
SMG8
YY1AP1
SLC35E2B
DAP3
RPF2
EBAG9
EIF2B5
RCHY1
NUP42
ZCWPW2
GRHL2
AZI2
ATAD2
TMEM260
STRADA
LDHA
ERAP1
CUL5
CMTR2
RAD23A
MARVELD2
WWOX
UBE2I
FAM234A
BUB3
MRPL27
EME1
ZC3H6
RGS9BP
FAM86B2
ANKRD27
ZBTB40
PPP2CA
PLEC
NRDC
H4C11
ESRP2
HARBI1
ATG13
LLGL2
GABARAPL2
CCT2
PPIG
HOXB7
GPBP1L1
UBA1
TM9SF4
UTP11
IGSF9
DDX19B
ZNF696
RNF6
SPOP
RBM22
POLD3
KRT18
IMMT
WDR25
WARS1
TMEM248
MTHFD2
RIN2
CNOT2
LDAH
IRF2BPL
TAF1
NR4A1
DIAPH1
ATL2
SEPTIN9
KLHL22
NRL
DCAF11
ZBTB4
UBFD1
TRIM33
TMEM138
POLR2A
EARS2
CYB561A3
H2AC21
ESYT1
TBC1D30
GNS
FUS
ZNF274
TTC32
MARS1
ARHGAP9
NUTM1
NOP10
ASNS
ELK4
LSM5
AVL9
PSENEN
MACROD2
JUND
ST6GALNAC2