ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457296 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◣ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CIART
CRY2
DBP
PER2
AGAP11
CRY1
NR6A1
PFDN4
TEF
RORC
NR1D1
BCAS3
TRAPPC6A
BLOC1S3
CLUAP1
SNRPE
FZD1
KAT5
PIP4P1
PLEKHF2
YPEL5
LNX1
NPTN
PLD6
RALGDS
GET4
OSGIN1
TXNIP
CTDSP2
PTBP1
SLC20A1
PDXDC1
NOL8
CENPP
RNF43
EIF5A2
CDK4
FAM76A
LRRC56
TRIM37
MAPK6
CDIPT
MYL12A
CLN6
SLC25A36
PLEKHG2
PPM1D
CEP63
ANAPC13
RFESD
PMS2
AIMP2
UBE2B
CDKL3
PTCD3
POLR1A
UVRAG
HOOK2
ARRDC4
CCDC24
UTP18
MBTD1
GTF2A1
PNPLA7
CSTF1
AURKA
DDX5
CEP95
AVPI1
ANKRD12
USP32
PRKCI
MOCS3
DPM1
SENP8
MYO9A
TADA3
ARPC4-TTLL3
ARPC4
DPP3
FAM117B
TMEM116
ERP29
CSDE1
SLC35E2B
MAP2K7
SRP54
TUFT1
CENPN
NUDCD3
STX4
PHKG2
TIPARP
GNB2
BCAS1
DDX42
CCDC47
PPP1R13L
POLR1G
IFRD2
FLCN
PNO1
GMFB
SLC35E2A
IGFL4
BRIP1
BCL6
RNFT1
COX14
PC
ATG101
TEX14
RAD51C
EIF3B
FAM53C
CDC25C
RNASEK
LRPPRC
EED
DCLRE1B
AP4B1
PRORP
PPP2R3C
TMEM260
HIF1A
VMP1
PTRH2
ISOC2
TIMM22
MEA1
MADD
RAD9A
AKT1S1
TBC1D17
UQCRC2
PARD6B
OSGEP
APEX1
RCCD1
MVB12A
GIPR
MRPS23
GREB1
HSPH1
EMC2
NME1
DACT3
RBBP5
BLVRB
SPTBN4
H2BC6
GRHL2
MBNL1
SPATA17
GPATCH2
EIF4A1
PAK1IP1
C6orf52
PPP1R3C
PSMD6
ESYT3
SELENOW
NOCT
CHFR
STX16
PDE12
MTMR14
HBP1
TATDN2
SSBP2
TENT5B
RNF223
APPBP2
SLC25A19
TUBD1
RPS6KB1
UNC13D
POLG
KHSRP
CLTC
EIF3E
CCT5
ATPSCKMT
ZBTB37
SLC35A4
APBB3
CENPA
FAF1
TRMT12
TCERG1
TMEM53
ARMH1
ATF7-NPFF
ATF7
STK35
ILF3
HPS5
GTF2H1
HES4
C3orf14
VPS11
FNIP1
ZNRF2
ALDOA
FAM214B
ZNF687
MAN2A1
RNF13
KMT5A
TRIP6
ARFGEF2
EXOSC5
BCKDHA
WDR62
THAP8
MCCC1
KHDRBS1
NRAS
RPS19
SULT1A4
SULT1A3
SLC35A5
ATG3
HSF2
CD55
HSPBAP1
NPM1
RNF224
DHX40
RBBP8NL
PES1
BCAS2
CCDC107
SLC35B1
WDR74
RBBP6
SKA2
PRR11
RPS29
PPP1R10
MRPS18B
SULF2
UBAP2L
C1orf43
UBFD1
EARS2
WDPCP
MDH1
COA1
DNAJB5
PMVK
ZFP62
C1orf174
NR1H2
STAM2
AGFG2
CUTA
PLEC
H3C15
H3C14
H2AC19
H2AC18
NCOA3
NKIRAS1
NR1D2
LAMP1
COMMD8
PER3
CLCN7
HOXC13
GTF3A
ERCC6L2
MTHFR
CLCN6
ZNF292
RBM39
DHX35
VPS26A
AP5Z1
DAZAP2
SPG21
CDK12
CCDC85B
S100A13
CHTOP
MTHFD1L
WASHC2A
SNRPA
C19orf54
DENR
LRATD2
SLC25A13
INAFM1
SERF2
CAMKK1
TRAPPC2L
GALNS
G3BP1
MRPL40
HIRA
WASHC2C
RPUSD4
FAM118B
SLC33A1
MORF4L1
ALG13
CREBRF
SPNS1
SLC35B2
KMT2E
PRDX6
ZNF331
MAPK1IP1L
TMEM185B
B3GNTL1
PRKAR1A
ZNF438
SDR39U1
SRSF1
CPEB1
ZNF263
TRMO
XPOT
ATP6V1H
ADNP2
RRAGC
TRIQK
HMGB2
TOB1
COQ10B
NFX1
HERC3
GSK3B
GYG1
LRFN4
SRSF5
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
TMEM18
USP36
GBE1
IP6K1
TPD52L2
YDJC
PPP1R3D
GCDH
FAM217B
TCF25
FAM214A
UBE2Q1
PER1
CCNL1
ARRDC3
NEURL2
CTSA
RAB17
ZNF706
DHPS
PUM2
EPM2A
SNAP29
PI4KA
SRCAP
LOC730183
SEPTIN2
HDLBP
CLN3
SCAF11
TLE6
SUMF1
STAT6
THAP5
DNAJB9
PAF1
MED29
KDM4C
GGA2
MARCHF8
NBN
HNRNPF
ZC3H4
EIF1
RMI1
HNRNPK
BHLHE40
SLC25A26
BCLAF1
NAA50
ATP6V1A
THNSL1
RPS11
ZZZ3
POLI
PPAT
PAICS
HEXA
RRAGB
G6PC3
COMMD9
PPFIA4
COL6A1
TBCEL-TECTA
TBCEL
RMND1
HCFC1
ARMT1
H2BC12
H2AC12
NTMT1
NFYC
ARIH1
UCP2
EIF4B
CHMP2B
EPB41L4B
MED13
ZCWPW1
MEPCE
CD164
ATP6V0B
SLC35C2
SETD1A
FNBP4
RFX3
UNK
NOP14
GRK4
SNX5
MGME1
MTCH2
TM9SF1
SLC3A2
TMEM141
RIMBP2
WTAP
SOD2
BRPF1
LAMC1
SLC25A25
NAIF1
DGAT2
ZNF335
TRIM8
CASC3
YEATS4
HNRNPA2B1
CBX3
SRP9
ISG20
MCM7
AP4M1
LARP1
BAX
DHODH
HNRNPH2
GLA
KLF11
H4C14
RPSA
INO80
GABPB2
CFAP251
HDAC4
COLEC11
CAP1
CLN8
SPPL3
PPP4R3B
CNNM2
VPS33A
POLR1D
LNX2
ILVBL
ITGB1
ZFP91
MAL2
KAT7
CLK1
ADK
ENSA
DDX3X
TUBA1C
YARS1
S100PBP
MAX
SREK1
STXBP4
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
MZF1
CCDC114
NAPA
CIPC
SLC43A2
ZFP1
PCBP1
WDR89
DDX59
YWHAZ
XRN2
TBC1D13
TMEM187
SLC25A24
PPM1A
SLC39A6
ELP2
THRAP3
L3HYPDH
JKAMP
EIF4G1
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
TMCC1
LAMTOR4
EIF5
SLC25A11
RNF167
HEXIM2
TUBA1B
RNMT
FAM210A
PRC1
ECH1
FBXO5
SPATA2
LPXN
DFFA
TJP2
PDP2
MRPL36
BCAS4
STMN1
LUC7L2
KPNA2
MLH1
EPM2AIP1
SGO1
SLX1B
SLX1A
COPS7A
BOLA2B
BOLA2
SMARCD2
TBC1D15
UBR5
PIGO
ASPH
SON
GART
PDCD6IP
AMDHD2
PTP4A1
ZNF219
PPIA
PRKDC
MCM4
STX6
GPBP1
DDX43
ANAPC7
NSUN3
DHFR2
MTRNR2L8
TRIM59
COX19
CSRNP1
TRMT112
SLBP
PRDX5
USP9X
HNRNPA1
CBX5
TARDBP
HIRIP3
UBQLN1
SCAF1
RRAS
PPP2R5C
USP48
CHKA
PABPC1
H4C15
ATIC
AEN
RBM3
SLC2A4RG
PSME3
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
TBX2
DPH1
RLF
JUNB
HES1
FBXO33
OSGIN2
DNAJB1
ERGIC2
ADGRE5
NAA38
DDX23
CYB5D1
TSTD2
NCBP1
RIPK2
PCNT
C21orf58
CACYBP
IREB2
BOLA2-SMG1P6
PCIF1
SNX16
ARL4A
TMED10
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
WDR6
ZNF217
DCBLD1
PGP
PPP1R15A
POLR2J3
ZNF384
SRRT
LTV1
SMG9
RNF31
PSME2
BCL9L
FAF2
SPTSSB
DUSP1
ARF6
SERINC3
PHF12
GOLIM4
ELOB
OGFOD2
U2AF2
SPAG9
TFAP2C
TOP3A
SMCR8
TANC2
SETDB1
KIFC1
RCE1
MXD3
TRA2B
CHMP3
TIMM44
PSMC5
FTSJ3
AHI1
TAGLN2
HNRNPD
SLC49A4
CYC1
ZBTB7B
GMNN
TIPIN
PIK3R3
CCDC6
ZNF24
TREX1
LAMTOR1
KIAA0895
APH1A
ANLN
METTL1
EEF1AKMT3
METTL23
JMJD6
DNAJB12
SYT1
SRSF4
PIGW
OSBPL1A
MYO19
SOCS5
RITA1
KPNA3
DDX54
ZNHIT1
TSPAN31
PLOD3
RRP9
PARP3
NOP58
HNRNPH1
SIRT4
PNISR
DUS3L
EGR1
PPIL3
NPC1
NIF3L1
NCAPD2
MRPL51
DVL2
SYNRG
RABGGTA
PNPO
SLC25A10
PPP1R15B
JADE2
DDX6
TET3
AIG1
FAM86B1
TMEM251
MOAP1
PRMT2
TOR1AIP1
TNFRSF12A
SUPV3L1
DDIT4
HNRNPA0
PAIP2
KMT5C
GOLGA5
CIC
CANX
C17orf58
DYNC2I2
SERTAD3
SARAF
LYRM1
IQSEC1
CC2D1B
ZC3H11A
SESN1
NUP188
DOLK
CEP57L1
SENP2
AP1G1
CHD1
SPATC1L
SERPINE1
MAF1
ZAR1L
SF3B4
BRCA2
ALOXE3
COPS3
NAB2
MED1
SOX12
HIPK1
BRD2
TAX1BP3
KRT80
HSF1
EMC6
BOP1
RPL27
PPP5D1
CALM3
BFAR
PDIA4
UBE2M
GABPB1
NCL
ZNF408
GPRC5A
DARS1
ARHGAP1
PDPR
LIN54
ARF3
ORC4
MBD5
FMC1-LUC7L2
FMC1
ZNF57
SMC4
MDM2
IFT80
TSPAN4
AMOTL2
CAD
KRT8
C15orf39
C14orf93
DUSP7
TBL1X
RPL10
RBM8A
ZNF286A
TSPYL1
ST20-MTHFS
SLC30A1
DSE
CBLL1
TANK
PMEPA1
MICU1
ZBTB8OS
RBBP4
NAT10
DOP1B
PLK4
MBTPS1
PKNOX1
NOL11
ETF1
DMTF1
C5orf51
PPP4R3A
LRP10
DUSP28
ANKMY1
STAG2
TFDP1
TOR3A
TAF9
RAD17
AK6
UBE2T
SRSF7
RSL1D1
ATP6V1G1
CEP152
ATP5MC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DCUN1D3
ANKFY1
ZBTB10
ZBTB21
MAT2A
FUBP1
DNAJB4
UBC
WDR81
PSMD9
MFSD4B
HPD
TRIM52
ICAM5
GABPA
ATP5PF
NDUFAF5
ESF1
SBDS
POP7
ZNF778
TNPO2
LONP1
CNPY2
CATSPERD
BRWD1
UBE2D3
KIF22
FANCC
PNRC1
TAF7
LOC114841035
FKBP2
RBM15
NCBP2AS2
NCBP2
TMEM151A
SRSF6
FOS
ACAD9
STK40
RNH1
OPLAH
TPT1
ZZEF1
CYB5D2
CAMLG
TSC22D1
PHC3
SYVN1
CREBZF
BHLHE41
DOK7
GNAS
KLF10
TDRD1
SLC39A4
HSPA9
HPSE
MYDGF
COQ7
CSE1L
XKR9
LACTB2
ZNF672
RACGAP1
NPDC1
KEAP1
RPL15
MED15
PTPN1
NQO1
CBFA2T2
LEKR1
CCNB1
WBP1
SMG8
YY1AP1
DAP3
RPF2
EBAG9
EIF2B5
RCHY1
NUP42
ZCWPW2
AZI2
ATAD2
STRADA
LDHA
ERAP1
CUL5
CMTR2
RAD23A
MARVELD2
WWOX
UBE2I
FAM234A
BUB3
MRPL27
EME1
ZC3H6
RGS9BP
FAM86B2
ANKRD27
ZBTB40
PPP2CA
NRDC
H4C11
ESRP2
HARBI1
ATG13
LLGL2
GABARAPL2
CCT2
PPIG
HOXB7
GPBP1L1
UBA1
TM9SF4
UTP11
IGSF9
DDX19B
ZNF696
RNF6
SPOP
RBM22
POLD3
KRT18
IMMT
WDR25
WARS1
TMEM248
MTHFD2
RIN2
CNOT2
LDAH
IRF2BPL
TAF1
NR4A1
DIAPH1
ATL2
SEPTIN9
KLHL22
NRL
DCAF11
ZBTB4
TRIM33
TMEM138
POLR2A