ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457524 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◣ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

GET4
CDK4
KAT5
CRY2
CIART
AGAP11
PER2
DBP
CRY1
PLD6
CLUAP1
RORC
NPTN
PIP4P1
RAD9A
SNRPE
SLC35A5
ATG3
TRAPPC6A
BLOC1S3
RALGDS
HOXC13
COMMD8
TEF
NR6A1
NKIRAS1
NR1D2
LAMP1
KHDRBS1
TMEM116
ERP29
MAPK6
RNF43
ZNF292
PFDN4
LRRC56
NOL8
CENPP
PTBP1
HPS5
GTF2H1
VPS11
YPEL5
ANKRD12
DHX35
OSGEP
APEX1
EIF5A2
NR1D1
HOOK2
PLEKHF2
UVRAG
SPG21
EMC2
LNX1
TRIM37
CLCN7
UBE2B
CDKL3
CLN6
AP5Z1
WASHC2A
ARFGEF2
STX4
MAP2K7
BCAS3
MTHFR
CLCN6
TXNIP
RPUSD4
FAM118B
CSDE1
FAM76A
RNASEK
OSGIN1
WASHC2C
TRMO
HES4
APPBP2
SNRPA
C19orf54
HIF1A
VPS26A
MAP4K1
EIF3K
GMFB
SLC20A1
B3GNTL1
COMMD9
SPNS1
CHFR
ARRDC4
RAB17
USP32
ISOC2
WDR62
THAP8
IP6K1
PNPLA7
ZNF331
NME1
MEA1
RFESD
SLC35B2
PRDX6
AVPI1
DAZAP2
LRATD2
MAPK1IP1L
RRAGB
ALG13
NEURL2
CTSA
PRKAR1A
CREBRF
ATP6V1H
UBAP2L
C1orf43
HBP1
SUMF1
UTP18
MBTD1
EPB41L4B
TRAPPC2L
GALNS
SLC33A1
CAMKK1
FAM117B
THAP5
DNAJB9
BLVRB
SPTBN4
GTF3A
G6PC3
YDJC
RMND1
ARMT1
ZNF438
GCDH
PMS2
AIMP2
HEXA
UBE2Q1
CCDC85B
STAT6
PER1
LAMC1
CLTC
SNX16
RIMBP2
IFRD2
TCF25
ZC3H4
ZNRF2
SLC25A13
CCDC24
TIMM22
HERC3
H2BC12
H2AC12
ATP6V0B
CLN3
ILF3
PPP1R3C
STMN1
FAM214A
FAM214B
ZNF706
DHODH
ZBTB37
MAX
GTF2A1
LRFN4
GYG1
PPFIA4
HNRNPH2
GLA
DDX5
ADNP2
FNIP1
KLHL12
JUNB
KMT2E
SLC25A26
SCAF11
PER3
DPP3
TMEM151A
SERF2
PPM1D
CEP63
ANAPC13
CEP95
G3BP1
TBCEL-TECTA
TBCEL
ATXN2
POLI
SGO1
NUDCD3
PSMD6
NBN
PPAT
PAICS
DDX3X
XRN2
PDE12
GSK3B
TANC2
CSTF1
AURKA
RPSA
CLN8
VPS33A
EPM2A
PHKG2
PC
NCOA3
BAX
IQSEC1
MORF4L1
NTMT1
SMARCD2
PAF1
MED29
SNX5
MGME1
RPL27
S100A13
CHTOP
DGAT2
TRIQK
DPH1
TLE6
RNF13
ATIC
UBR5
CUTA
TENT5B
MVB12A
PABPC1
CHMP2B
EXOSC5
BCKDHA
COQ10B
CFAP251
YWHAZ
LARP1
RCCD1
SEPTIN2
HDLBP
TBC1D13
ZZZ3
AKT1S1
TBC1D17
CNNM2
ERCC6L2
DHPS
SDR39U1
ESYT3
TDRD1
SLC43A2
FLCN
DDX42
CCDC47
RNF223
BHLHB9
SENP8
MYO9A
MADD
CCDC107
PCBP1
COX14
MYL12A
MTHFD1L
SLBP
MCCC1
PKNOX1
DDX59
GOLIM4
RRAGC
ISG20
ZNF263
BCL9L
ADGRG7
SLC25A36
SPPL3
SLC25A24
STXBP4
COX11
ZNF286A
DACT3
PRPF3
HSF2
HNRNPA1
CBX5
CNPY2
TOB1
SRP54
ADGRE5
SETD1A
SLC39A6
ELP2
MRPL36
AMDHD2
C14orf93
NAT10
ZNF672
BRIP1
TBC1D15
GBE1
MLH1
EPM2AIP1
TRIM8
SLC25A10
CLK1
HES1
METTL1
EEF1AKMT3
RAB21
USP36
EIF4A1
EIF3E
NPM1
CD164
PRORP
PPP2R3C
KDM4C
CYB561
AEN
FBXO5
PPP1R3D
FAM217B
NFX1
BFAR
ILVBL
INO80
GADD45G
CENPN
HNRNPA0
ZNF687
CCDC86
C5orf51
RAD23A
DVL2
TBC1D30
GNS
PPP5D1
CALM3
TMEM141
STX6
C15orf39
NQO1
SOCS5
DENR
SPATA2
PDP2
DNAJB5
PARD6B
SULF2
NAMPT
MTCH2
WTAP
SOD2
TIPARP
TMEM53
ARMH1
ALOXE3
VDAC2
PPM1H
SPAG9
GGA2
ORC4
MBD5
TUBD1
RPS6KB1
PUM2
L3HYPDH
JKAMP
RAD50
DLX4
ZFP62
HSPBAP1
SYNCRIP
SRCAP
LOC730183
KHSRP
NUP42
GRAMD2B
EIF1
RNF139
STAM2
MTDH
HNRNPD
TOR3A
YARS1
S100PBP
YEATS4
HDAC4
GPRC5A
THOC7
ATXN7
SLC35A4
APBB3
OSGIN2
ZBTB40
MRPL27
EME1
UCP2
USP9X
METTL23
JMJD6
TCERG1
TSTD2
NCBP1
TOP3A
SMCR8
CYC1
CCDC6
FAM86B1
ZNF696
PTCD3
POLR1A
THRAP3
BCAS4
CASC3
HSPH1
XPOT
ENSA
RLF
NEMP1
DNAJB1
CAMLG
TBCK
AIMP1
LAMTOR4
ARF6
NUP188
DOLK
ICAM5
SLC25A19
TATDN2
CCNI
GABPB2
ADK
CENPA
PAK1IP1
C6orf52
UBE2I
NFYC
CSRNP1
OSBPL1A
SUPV3L1
RBBP5
PDCD6IP
NCL
PKN1
EIF3B
C17orf58
SSBP1
NOP14
GRK4
MZF1
SYNRG
TMEM18
WDR89
DFFA
PLEKHG2
AMMECR1L
DCBLD1
ATG101
DUSP1
NRDC
SPTSSB
HOXB7
KPNA2
FAF1
TAGLN2
HIPK1
RMI1
HNRNPK
TAX1BP3
EMC6
TMCC1
HPSE
IMMT
PDE4A
MAL2
SLC30A1
FOXRED2
INTS6
INAFM1
NRAS
TARDBP
TIMM44
CC2D1B
BCLAF1
RCE1
PSMC5
FTSJ3
SOX12
TAPBPL
TM9SF1
CIPC
PRC1
MXD3
ZFPM1
ZNF219
SRSF5
TBL1X
ATP5MC1
PPP2R2C
UNC13D
ASPH
ZCWPW1
MEPCE
FAM53C
CDC25C
FBXL18
ASF1B
MARVELD1
BAHCC1
CCNL1
ZBTB10
TNPO2
ATL2
TMEM185B
DHX40
STK35
NUTM1
NOP10
ABHD6
WDR74
EIF4G1
PSME3
ZNF408
ARHGAP1
ACAP2
VMP1
PTRH2
LUC7L2
ZNF384
RSL1D1
ATP6V1G1
SFSWAP
SLC35C2
ITGB1
PDIA4
TAF9
RAD17
AK6
CCT2
TM2D3
SLC25A25
NAIF1
KCND3
NAPA
APC
SLC3A2
ZNF335
TJP2
SRRT
TIPIN
HSPA9
PITRM1
ARL4A
MYL6
SIRT4
CANX
HNRNPF
THNSL1
CAP1
NAA38
CYB5D1
ZNF57
ERLIN2
SREK1
LAMTOR1
AIG1
EBAG9
IGSF9
RFX3
FBXO33
MBNL1
TSPYL1
DSE
AP1G1
KLF4
PTP4A1
COPS7A
FAM234A
LPIN3
EIF5
DNAJB12
ADAMTS17
RRP9
PARP3
SLC35B1
SMG8
RCHY1
PDK2
MAN1B1
TMEM14C
POLR1D
LNX2
DUSP28
ANKMY1
PTPN1
RBM22
GPRC5B
BRPF1
CD2BP2
ALDOA
LTV1
PSMD14
MARCHF8
PIK3R3
CEP152
CDK5RAP3
EBPL
CNIH3
PRKCI
RITA1
DDX54
DYNC2I2
TFF1
NDRG1
PES1
TBCB
POLR2I
FAM174C
SRSF1
SMG9
MFSD4B
NOP58
C3orf14
LRP10
UBFD1
EARS2
LSR
MRPL45
MAGI1
MSTO1
RNFT1
POLR2J3
ANKHD1-EIF4EBP3
ANKHD1
PNO1
DOK7
PFAS
MRM3
GLOD4
MED26
PSMD9
HPD
ELK4
RHOD
NADK
ARRDC3
RELL1
AKAP10
FNBP4
TUFT1
TEX14
RAD51C
TMED10
GABPB1
CAD
CMTR2
TXNDC12
BTF3L4
COL26A1
CACYBP
RNMT
FAM210A
FBXW4
COQ7
VPS8
PNPO
ADGRE2
CASP7
EED
SRSF7
BAG6
APOM
ATP6V1C1
MRPL11
PHB
STIP1
PPARGC1A
ARIH1
RPS29
RBM15
NOP16
HIGD2A
LRR1
RBM39
LOC114841035
FKBP2
RPF2
TOGARAM1
KLHL28
ZFP1
MED13
UNK
RBBP6
SON
GART
ASNS
EIF3A
NIM1K
PPP4R3A
NCBP2AS2
NCBP2
FNTB
ADCK1
OSBPL2
RTEL1
SNAI1
SETDB1
PDPR
SBDS
ARRB2
UFSP1
NAA50
ATP6V1A
NRL
DCAF11
ATG16L2
MRPL40
HIRA
CTDSP2
KPNA3
DCLRE1B
AP4B1
GABPA
ATP5PF
NR4A1
FAM227B
DTWD1
OBSL1
INHA
CPEB4
ZAR1L
BRCA2
PRRC2B
AFF4
EIF3H
NDUFAF4
KLHL32
DOP1B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TTLL4
MCCC2
PDE7A
UBE2D3
TAF1
SRFBP1
HMGCR
ZNF195
RAD52
SIVA1
HCFC1
ZBTB21
LDHA
RHBDD1
ABHD2
HENMT1
CDK12
CHKA
PGP
TREX1
KRT80
LDAH
TMEM184A
DDX39A
TPR
ODR4
SRD5A1
NSUN2
HMGB2
MICU1
IDI1
TMTC2
STX16
WDR4
BHLHE40
EIF4B
CHD1
VPS45
GPBP1
PPP1R15B
NDUFAF5
ESF1
KLHL22
LONP1
CATSPERD
UBC
TRMT5
SLC38A6
SEC31A
ZBTB7B
HAGH
FAHD1
ESYT2
TUBA1C
DDX43
CHMP3
TFDP1
NME2
CD55
SRP9
ESRP2
CDC25B
PPM1A
SIKE1
CCDC97
TPD52L2
PPP1R15A
CNOT2
TDRD5
RDH13
MKS1
HNRNPH1
TOR1AIP1
ZNF248
PLA2G6
ETF1
STRADA
NBPF15
HEXIM2
PMEPA1
LEKR1
RBSN
SLC24A1
S100A10
ZNF791
ZNF490
SYT1
KRIT1
ANKIB1
WDPCP
MDH1
ETS2
ESYT1
NANP
ZNF207
LYRM1
DCUN1D3
FUBP3
ZNF217
ERAP1
ATP6V0E1
LDLR
TDRKH
STK4
GPHN
RAE1
RIPK2
TFAP2C
TANK
GTF3C4
DDX31
ASGR2
MRPS23
E2F6
ZNF768
UBE2R2
SPRING1
RNFT2
WASHC4
TWNK
MRPL43
NOL7
FBXO22
NUDCD2
HMMR
HCFC2
GLT8D2
CNBP
CPEB1
TKTL1
TEX28
PSMD5
SNAP29
PI4KA
FZD1
RPS11
COL6A1
CDIPT
HNRNPA2B1
CBX3
MCM7
AP4M1
KLF11
H4C14
COLEC11
PPP4R3B
ZFP91
PDXDC1
KAT7
MOCS3
DPM1
MMADHC
CCDC114
TADA3
ARPC4-TTLL3
ARPC4
SKA2
PRR11
NR1H2
TMEM187
TRIP6
EIF4A2
CALM2
SLC25A11
RNF167
TUBA1B
ECH1
PPP1R13L
POLR1G
LPXN
SLX1B
SLX1A
BOLA2B
BOLA2
BCL6
PIGO
PPIA
PRKDC
MCM4
ANAPC7
GREB1
NSUN3
DHFR2
MTRNR2L8
TRIM59
COX19
TRMT112
PRDX5
HIRIP3
UBQLN1
SCAF1
RRAS
PPP2R5C
USP48
H4C15
RBM3
SLC2A4RG
HNRNPC
TUBGCP5
TRA2A
TBX2
ATF7-NPFF
ATF7
ERGIC2
DDX23
UQCRC2
PCNT
C21orf58
IREB2
BOLA2-SMG1P6
PCIF1
LRCH4
FBXO24
CYTH2
WDR6
RNF31
PSME2
FAF2
SERINC3
PHF12
ELOB
OGFOD2
U2AF2
KIFC1
TRA2B
AHI1
SLC49A4
GMNN
ZNF24
KIAA0895
APH1A
ANLN
SRSF4
PIGW
MYO19
ZNHIT1
TSPAN31
PLOD3
SPATA17
GPATCH2
PNISR
DUS3L
EGR1
PPIL3
NPC1
NIF3L1