ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CDK4
GET4
PLD6
KAT5
CRY2
AGAP11
PER2
CRY1
CLUAP1
NKIRAS1
NR1D2
CIART
DBP
RALGDS
PIP4P1
NPTN
RORC
LAMP1
RAD9A
TRAPPC6A
BLOC1S3
CLCN7
SLC35A5
ATG3
COMMD8
ANKRD12
CDK12
HOXC13
LRRC56
SNRPE
TMEM116
ERP29
KHDRBS1
NR6A1
DENR
TEF
MAPK6
RBM39
GTF3A
PTBP1
DHX35
RNF43
ZNF292
YPEL5
VPS11
NOL8
CENPP
AP5Z1
ARFGEF2
HPS5
GTF2H1
NR1D1
EIF5A2
MTHFR
CLCN6
PER3
WASHC2A
OSGEP
APEX1
PLEKHF2
STX4
UVRAG
UBE2B
CDKL3
FAM76A
PSMD5
HOOK2
ERCC6L2
RPUSD4
FAM118B
EMC2
CLN6
VPS26A
LNX1
RNASEK
SPG21
SLC35B2
MAP2K7
SLC33A1
TRIM37
TRAPPC2L
GALNS
OSGIN1
AVPI1
WASHC2C
SNRPA
C19orf54
TXNIP
IFRD2
IP6K1
ZNF331
HES4
PFDN4
BCAS3
MAP4K1
EIF3K
TMEM185B
ATP6V1H
SPNS1
ARRDC4
RPS11
PPP1R3C
GYG1
SERF2
WDR62
THAP8
PHKG2
TMEM18
UBAP2L
C1orf43
PRDX6
B3GNTL1
ISOC2
NOP14
GRK4
SLC20A1
ILF3
SLC25A26
PNPLA7
TUBGCP5
FNIP1
SPPL3
TRIM59
MRPS23
GCDH
HIF1A
ZNF438
KDM4C
TBCEL-TECTA
TBCEL
SLC25A13
UBE2Q1
NEURL2
CTSA
ADNP2
AMDHD2
ZNRF2
GMFB
STAT6
USP32
HERC3
COMMD9
CCDC85B
FAM117B
PMS2
AIMP2
RRAGB
CLN3
RAB17
PER1
PC
DPP3
CREBRF
RMND1
ARMT1
TIMM22
PDE12
BAX
TRMO
SLC25A11
RNF167
SLC25A36
EPM2A
NUDCD3
CSTF1
AURKA
NME1
MTHFD1L
SUMF1
CCDC24
SENP8
MYO9A
MYDGF
IREB2
FZD1
CFAP251
GTF2A1
CAMKK1
ZZZ3
LRFN4
TBC1D13
CEP63
ANAPC13
MED1
G6PC3
THAP5
DNAJB9
KLF11
HEXA
THRAP3
DACT3
MACROD2
PUM2
ATXN2
ATP6V0B
LAMC1
EPB41L4B
DVL2
TRIM8
ZNHIT1
PLOD3
AEN
DDX5
CEP95
KLHL12
FAM214A
RFESD
TLE6
HES1
SLC25A10
UTP18
MBTD1
ZBTB37
MAL2
DFFA
MTCH2
CLN8
EIF4G1
VPS33A
MAX
HSPBAP1
SLC49A4
ZNF263
PPFIA4
PPP1R3D
FAM217B
AKT1S1
TBC1D17
WDR89
ANKFY1
MVB12A
ISG20
ZNF706
RNF223
COX14
ADGRE5
CUTA
MEA1
BLVRB
SPTBN4
OSBPL1A
ARF3
HNRNPH2
GLA
CCNB1
ASPH
MTDH
GREB1
DHODH
XRN2
POLI
INO80
SRP54
HBP1
DLX4
ZC3H4
USP36
RIMBP2
GBE1
SGO1
CCDC86
SLBP
SLC2A4RG
TJP2
PSME3
POR
RRAGC
ZNF84
STRIP1
C1orf174
GGA2
STMN1
GSTP1
STYXL1
MDH2
YARS1
S100PBP
ESYT3
STXBP4
COX11
SCAF11
INSIG2
MAPK14
G3BP1
MRPL36
SLC35A4
APBB3
ALG13
RAD50
TBC1D15
NFX1
CNNM2
PRRG2
NOSIP
FLCN
EIF3B
H2BC12
H2AC12
DGAT2
SMARCD2
CYB561
YDJC
NAA38
CYB5D1
LTV1
EIF4A1
PABPC1
PNPO
TIPARP
COPS7A
CBFA2T2
THNSL1
SOCS5
ATIC
ERGIC2
PPAT
PAICS
PDP2
C15orf39
RNF13
HSF2
NTMT1
PIK3R3
CLTC
TMEM53
ARMH1
ABCA3
NAT10
CD164
TATDN2
TDRD1
UBR5
STX6
TOP3A
SMCR8
JUNB
CCDC6
TBC1D30
GNS
RBBP6
ZNF219
STX16
PRPF3
EXOSC5
BCKDHA
CCDC107
PPM1H
CHFR
RRP9
PARP3
NAMPT
DHX40
MFSD4B
RPSA
PDPR
ORC4
MBD5
UPF3A
FAM214B
KPNA3
DCBLD1
NSUN3
DHFR2
METAP1D
TIPIN
SYNRG
CIB3
SLC25A19
PPP4R3B
CC2D1B
PLEKHG2
ALOXE3
TRIP6
ADCK1
RC3H2
ZNF57
PDK2
NCOA3
CENPN
TENT5B
RCHY1
HNRNPA1
CBX5
CENPA
DPH1
APPBP2
KPNA2
TARDBP
HPS1
UBN1
GLYR1
ALCAM
SLC39A6
ELP2
ARL4A
GOLIM4
CAD
NAPA
TANC2
DEFB116
SLC35E3
UCP2
IQSEC1
NUTM1
NOP10
TPD52L2
PARD6B
ATG101
TOR3A
ILVBL
WDR77
ATP5PB
NFKBIL1
ATP6V1G2
HDAC4
MLH1
EPM2AIP1
CSRNP1
C5orf51
TMEM151A
ZFPM1
AIG1
PTCD3
POLR1A
CHKA
ATF7-NPFF
ATF7
LIN54
TBL1X
SNAI1
MARCHF8
PPM1D
PRKAR1A
DDX3X
PPP1R10
MRPS18B
CMTR2
PSMD6
KCTD9
CDCA2
NCOA4
SCAP
POLR1D
LNX2
SMG5
LAMTOR4
NUP188
DOLK
ACAD9
L3HYPDH
JKAMP
SPAG9
TNPO2
YOD1
ZNF286A
FBXO5
COX7B
MYL12A
MICOS10-NBL1
MICOS10
MICU1
RCCD1
SLC35E2A
WDSUB1
PNO1
ATP5MC1
MRPL45
PUF60
TRIB1
SAC3D1
MCCC1
PLD3
C19orf47
TMEM248
BTBD10
ADK
VMP1
PTRH2
MXD3
LAMTOR1
ZNF778
PLEC
SF1
HMGN2
MRPL40
HIRA
RNF26
MTMR14
LONP1
CATSPERD
GIPC1
HNRNPD
DOK7
SUPV3L1
TET3
UTP20
SIRT1
TIMM44
SOX12
WASHC4
ACAP2
SKA3
MRPL57
FAM200B
PSMG1
PFAS
FBXO33
ATL2
METTL17
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ATAD2
WIPI1
RBBP8NL
SLC45A4
GDI2
NMRAL1
HMOX2
NRAS
TSTD2
NCBP1
SPTSSB
AMMECR1L
ERICH6
MAD1L1
FAF1
VPS8
PDIA4
NRDC
CDC5L
TCERG1
COLEC11
TAF1
SNX8
ADGRE2
TSPYL6
PPIA
SLC39A4
SETD4
PRORP
PPP2R3C
KHSRP
ZFP62
SH3GL3
NOCT
TTC32
TCFL5
PTDSS1
MTERF3
NPM1
HSPH1
CYC1
LPIN3
ZBTB10
ATP6V1C1
BHLHB9
CCNA2
DDX42
CCDC47
GPHN
MDN1
LARP1
FOS
FNTB
NADK
RGS22
SPATC1L
PDXDC1
CALM2
PKNOX1
SNX16
DHDDS
CDIPT
PGP
HPSE
DOHH
RAD23A
LRP6
MADD
DNAJB5
PSMG4
BCL6
ERCC1
LUC7L2
ZNF408
ARHGAP1
UGDH
WTAP
SOD2
XKR9
LACTB2
TUBD1
RPS6KB1
FUBP1
DNAJB4
CAMLG
GPSM2
ARRB2
METTL1
EEF1AKMT3
DUSP7
RPP25
RNF34
RAB40B
CAMKK2
EIF3E
RNFT1
COL26A1
RBBP5
RPS29
MCCC2
SRSF10
RPL27
GFUS
PPP1R13L
POLR1G
BCL9L
BRWD1
MET
WDR74
CNPY2
AKAP10
PLK3
ZNF165
DDT
UNC93B1
WDR25
WARS1
PPM1A
ABHD2
C12orf45
FKBP4
LOC114841035
FKBP2
OSBPL2
RTEL1
ANKRD13A
TFF1
TMEM80
DEAF1
STAG1
ANKRD40CL
COQ10B
PES1
STK35
HOXB7
FOXRED2
RBM15
SLC36A1
REXO4
UMPS
ISCA1
PPARGC1A
METTL23
JMJD6
WWOX
ESRP1
TTLL4
AHCTF1
ZNF248
CANX
RPS19
BMP7
GNB2
NAB2
EXOSC2
DUS3L
SQLE
UBE2S
SLC25A32
DCAF13
FUS
AFF4
CYRIB
UQCRC2
FAM86B2
ASB6
CASC3
QRICH1
SRFBP1
CCNYL1
LRATD2
HNRNPF
C14orf93
PCBP1
MRM3
GLOD4
BRIP1
MACROD1
PAK1IP1
C6orf52
TAF9
RAD17
AK6
BHLHE41
ASNS
NUCKS1
ZER1
MAN1B1
TRPC4AP
TTC7A
MCFD2
TSEN54
CASKIN2
DCLRE1B
AP4B1
TPR
ODR4
CDKN3
ASS1
SMG9
SLC35E2B
APC
FRAT2
CABIN1
BTN3A2
KLHL22
ATG16L2
DDTL
WDR35
SNAP29
PI4KA
PMVK
TMEM143
SYNGR4
ABCF1
PIM3
CSDE1
GRHL2
OSER1
TAGLN2
PDE4A
TDRD5
PRC1
SLF2
MRPS2
C9orf116
SHMT1
RNMT
FAM210A
RLF
ZNF696
LCORL
THAP7
MMS22L
PRCD
SIKE1
SMG7
DUSP28
ANKMY1
UBFD1
EARS2
ADGRG7
TOP2A
CKS2
ZCWPW1
MEPCE
BFAR
ING5
ZNF239
NBPF15
CORO2A
SRCAP
LOC730183
SLC2A8
CORO7-PAM16
CORO7
EBPL
RPS14
LIN52
ALDH6A1
PSMD9
HPD
DENND2C
DDX18
CDK18
SYNCRIP
STK40
TBCB
POLR2I
SLC35C2
SETDB1
PBX3
RAB3IL1
PTPN4
CENPF
RITA1
DDX54
LRRC8B
CASP7
UBA52
PDIA5
C20orf27
SUPT5H
PPP1R3B
NBN
YTHDF1
TMEM14C
CDK1
PRRC2B
TTC39A
LOC391322
OBSL1
INHA
SURF6
NOL11
FAM174C
ASH2L
CPEB1
TMEM87B
MARVELD1
TWNK
MRPL43
SLC26A2
TRIP4
RCBTB1
NCL
NUP42
IGSF9
CNIH3
PRR19
PAFAH1B3
RBM8A
POP7
MARVELD2
ZBTB40
ATP6V0E1
GOSR2
SPRING1
RNFT2
SPHK1
TADA3
ARPC4-TTLL3
ARPC4
TEX14
RAD51C
BCAS1
TRAPPC2
OFD1
SLC12A9
UFSP1
TCEANC
PRUNE2
TFDP1
EEF1AKNMT
TRAPPC9
TIMELESS
RAB21
FAM156B
FAM156A
SIX4
SERP1
EIF2A
HDHD5
GRK2
SLC19A1
CDH15
TBX2
POLR2J3
SENP2
GPATCH3
CFAP410
VMAC
NDUFA11
CCDC149
RGS9
MCM7
AP4M1
MBNL1
BZW2
ANKMY2
PLEKHG6
HP1BP3
EFCAB12
CLUH
DDX43
PPP5D1
CALM3
SPRYD4
NUF2
JADE2
RDH13
RELL1
ELAC2
BHLHE40
LDHA
TM9SF4
ARHGEF5
HSPA4
USP54
AGBL3
CD2BP2
FAM227B
DTWD1
EPS8
MZF1
LRPPRC
ADAMTS17
UFD1
CDC45
TJP1
HDAC2
ATXN7L2
SLC38A10
PCTP
ETS2
CCNG2
MEMO1
TMEM260
UROS
BCCIP
HSP90B1
LTBR
CDC73
ZNF335
CEP162
HNRNPA0
SCAMP3
ZNF131
NEK11
ASTE1
RAB7A
C8orf37
MAN2A1
NET1
ZNF503
UBALD2
TEDC1
YY1AP1
DAP3
OXR1
SF3B1
SUPT7L
SLC4A1AP
B3GAT3
SMG8
HMGCR
UFSP2
CDK20
AKAP11
YAP1
MAP7
EEF2K
CBX8
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TRUB2
COQ4
LINGO1
CST6
FUBP3
NOP16
HIGD2A
CNNM1
FAM234A
ARL6IP1
RPS2
CATSPERG
MRPL48
SAYSD1
LRRC58
ZFP1
RSL1D1
SCO2
ICAM5
TIGD5
EEF1D
LRIG3
SFT2D3
WBP1L
CDC20
MBTPS1
CEP152
NQO1
RGS9BP
ANKRD27
USPL1
HMGB1
POLR2H
DYNLRB2
ANP32E
GCLC
NSRP1
CDKN2D
FAM86B1
RPF2
GNA13
PFDN2
NIT1
KCND3
TRIM36