ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188634 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◣ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

CCDC33
KCNJ18
PPM1L
NRIP1
KCNN3
PRR3
GNL1
CD47
NUDT14
CACNB2
GREM2
ARL17A
ZMYND11
EMC8
COX4I1
OBSCN
CDH18
FOXD4L1
SCHIP1
KRTAP13-4
KRTAP13-3
OR5L1
RUNX2
HS3ST3B1
TWIST1
OR2T35
OR2T27
GOLGA6D
BAGE5
BAGE4
BAGE3
BAGE
MAST4
HPSE2
KRTAP19-5
KRTAP19-4
KRTAP19-3
KRTAP19-2
ZNF624
NEIL1
GCNT2
PGAM2
STAB1
TMPRSS15
SLC17A2
KRTAP2-4
KRTAP2-3
NPY4R2
NPY4R
CLDN17
SPAM1
RPN2
MROH8
HHLA2
PSMA5
RDH5
ITGA7
BLOC1S1
KCNMB2
LY9
RALA
FBXO9
SKAP2
LYZL4
PDE4DIP
HPS3
CTNND2
PITPNM3
C21orf91
COTL1
NEK11
ASTE1
SLC35A5
ATG3
F12
PFN3
ZBTB22
TAPBP
DAXX
WAC
C17orf113
GOLGA6A
RASGRF2
PRAMEF33
PRAMEF27
PRAMEF15
PRAMEF10
MAMDC2
MBD3L4
MBD3L2
HES1
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
MST1L
SLC16A1
MAPK13
PALMD
GSTT2B
CRYBA1
DDTL
DDT
PCOLCE2
JAG2
CELSR2
PDZRN4
TMPRSS5
AK5
MUC4
FSTL1
CFAP92
TACR3
B4GALNT2
IL13
ANP32A
CEP70
DRD3
FAIM
RIPK3
TMEM14B
ADCY8
SLFN5
KIF6
NEU1
DONSON
HLA-F
NRSN1
OR5H14
LMNA
DTD2
FAM106C
TBC1D16
CCDC40
KIAA0513
RBM25
HOATZ
BTG4
FOXL3
SAMSN1
SRGAP2C
SRGAP2B
PEX6
PGA4
RNF19B
FXYD4
KCNS1
CLDN16
WFDC5
TMEM39A
POGLUT1
DBNDD2
SUN3
C7orf57
KCNAB1
NATD1
LMNTD1
TFEB
PGC
RUNX3
BIN2
HSF4
PEX5L
TMCC1
ABCB10
TRADD
FBXL8
B3GNT9
OR12D3
OR5V1
FAM83B
SPATA22
DNAL4
MYOCD
FBXW10
GASK1A
AFF3
MACO1
GJA4
DGAT2
ABTB1
TMEM41A
CAMKK1
UST
SLC25A36
EGFR
GJB3
CYGB
RHCE
SPDYE18
CHODL
NLGN1
SLC6A3
KCNIP4
HHLA1
RSPH10B2
RSPH10B
RIMS1
CDC14C
LRRC52
UNC5B
PRCD
MSS51
CFAP44
SPATA2L
SLC9A5
FHOD1
PHLDB2
ABHD3
NBPF9
NCAM2
PAK2
YPEL3
TBX6
RASD2
TRIM27
RIOK1
CAGE1
NDUFS8
ARIH1
SLA
NEO1
NOMO3
ABCC6
FOXG1
SPANXD
SPANXC
DYM
UBE2D2
NAV2
UBL7
ANGPTL3
GUCA1B
MAS1L
SYT12
GLS2
DPP6
OPALIN
ATP5PO
CLBA1
AHNAK2
NSF
IRF8
SH3GL1
CHAF1A
NBPF10
DHRS7B
SEMA5B
ARL17B
TRIM17
TRIM11
GGCT
USP10
RANBP3L
DYNC2I1
ZBTB20
COG2
VMAC
NDUFA11
C17orf50
GAS2L2
MTMR8
KIAA1549L
COMMD2
IGF2BP3
BCR
SAFB2
SAFB
C1orf21
RPS6KL1
NUDT16
CRP
GDPD5
CLDN18
CDCA4
ASB17
CBLB
NBPF15
DNAJC27
CRISP1
TRIM49C
AGK
MARCHF6
PHACTR1
LGMN
MED1
CDK12
OR4D6
NOXRED1
ZNF512B
SAMD10
PRPF6
IQCC
DCDC2B
CCDC28B
NET1
NAT10
MX2
TRAM2
PANK3
CSNK1G3
NUAK2
HENMT1
ANO3
ARHGAP21
SRP9
DLGAP1
ABCF3
B3GNT5
P2RY12
SEC61G
OTULINL
IL17F
HDDC2
CDC42EP3
LPA
PCNX2
EXOC6
MECOM
UBA7
EIF4E3
CPA4
EPHB3
EPHA8
HSD17B10
SLC7A14
PRR23D2
PRR23D1
PGA5
NMNAT3
DDI1
RASGEF1C
LRRN2
BATF
CNTRL
SEPTIN7
TOP2A
OR2T3
ZNF695
TSPAN18
EIF3B
KLHL7
DENND2B
GGT2
OR5H2
POU6F2
PAPOLB
WFDC13
WFDC10B
ZNF565
SPDYE2B
SPDYE2
COQ8A
ADAT2
PEX3
ENHO
KIAA0319
CCRL2
ADA2
AGAP11
ADIRF
PTPRM
GPER1
RFXAP
TARS1
PHAX
ALDH7A1
SPATS1
FAM83D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
P2RY14
C17orf97
BATF3
CD63
UBE2L3
NPC2
ISCA2
POGK
OARD1
NFYA
GDF11
ZKSCAN7
IFT80
RARRES1
SMC4
SLC17A3
APP
BCAS1
GSTO2
NCEH1
GALK1
UBE2D1
GPR156
AKR1C3
RPS3A
PAK1
MAP4
GLCE
LPP
SBK3
DDR1
CLUL1
GHSR
CA8
NOTCH2
CHRM1
PMM1
RBPJL
MATN4
INO80D
RNF112
GATA2
CTSK
PLSCR2
ARID3B
TM4SF4
TAF10
TPP1
POLR2J2
C9orf40
ZSCAN16
ZNF322
BEND7
KRTAP26-1
GRIK1
MGAM2
HRNR
ZNF718
ZNF595
PLA1A
ABHD6
PRKAR1B
STXBP6
CRCP
SLC17A6
PTK2
LTBP2
NBPF1
GUK1
BET1
GPLD1
ALDH5A1
SELENOT
POTEH
COLCA2
ZBTB48
NDRG1
PLSCR4
OR8S1
TAB2
COX10
PXDC1
PSMB4
C9
MCTP1
CDCA7L
GRIK4
NUDT1
MRM2
NUMBL
GFM1
PRKAR2A
SUCNR1
TIRAP
SIDT1
GHR
PNPLA1
PKN2
GAP43
TFDP2
IL15RA
WAPL
SORCS3
PI16
RNF165
CGGBP1
SHOX2
RSRC1
ZNF778
ZFYVE26
NDUFB5
MRPL47
TRIM50
FKBP6
APC2
ZCCHC17
SNRNP40
ZNF12
ZNF654
VIPR1
COPS3
EGFLAM
DBNDD1
FKBP5
GRAMD1B
AHI1
SYNE2
IL1A
ZNF80
AUTS2
SMYD3
CD36
MAGEF1
H1-2
ELAC2
CLASP2
TUBA8
EXPH5
CD5
TIMM21
FBXO15
EPHB1
CCDC14
PDE4D
POLR2H
CLCN2
FRMPD2
CRISPLD2
PHF3
NPHP1
ELMO1
RAB3GAP2
CFHR2
ZNF641
MRPL40
HIRA
PON1
SP100
H3C3
RGPD6
MYC
SEMA3D
P2RY1
SNCG
MMRN2
C1QTNF6
PELI1
RGPD8
RGPD5
CDK5RAP3
MRPL55
ZMIZ1
PCGF5
PRDM7
RRP15
CTAG1B
CTAG1A
ACAD9
ZBTB9
SLC18A3
CHAT
SAMD9L
DHRS4L2
MRGPRF
XKR6
AFAP1
TM7SF2
CELF6
H2BC3
MOG
EMC3
AGT
GZMB
GAS8
PRR9
PEX10
OR2F1
MRGPRX3
TAAR1
PAQR5
PPIAL4H
MLIP
TESMIN
SPDYE4
MTARC1
PLAAT1
FMO3
CCL11
RTP1
AMY1C
AMY1B
AMY1A
DEFB112
OR52A5
OR2W3
PPIAL4C
PPIAL4A
PLD5
AGTR1
PRAMEF8
PRAMEF7
VSTM2A
ARL9
POTEB3
POTEB
OR52E8
OR52E6
LELP1
NPY1R
SSX4B
SSX4
OR6Y1
OR4D2
NYNRIN
NR5A2
NNMT
LOC389199
GYPA
BEND2
ADGRG4
CYRIB
INAVA
ADTRP
RAI1
GRPEL2
SPTBN4
SIVA1
PARP9
DTX3L
ZFAND2A
C21orf62
AGAP2
SRGAP2
PCYOX1L
FAM3B
VCX
GATA5
SYTL2
SLC8A2
NFKBIZ
BOD1
USF3
MADD
BRF1
PACS2
OR2T5
ATXN1
RBAK-RBAKDN
RBAK
SELL
STARD7
OR2T29
CLRN1
MYO15A
UGT3A1
SPECC1
DOK1
TPGS1
MADCAM1
LPIN1
OR2T2
FASTK
AGAP3
TMUB1
OR2T7
OGT
CLPTM1L
LOXL3
JAM2
ZNF823
LGALS12
CCDC54
TRDN
PARP15
JARID2
FSCN1
SNAP47
JMJD4
PDCD6
MELTF
RNF39
TRAF5
RIPOR1
VDR
ATG9B
ABCB8
IMPACT
SOCS7
GPR179
PAX7
BTN1A1
NKAIN1
LILRA3
TRAPPC5
ST6GAL1
RAB22A
RAB25
EFR3A
LARP1
CRIP3
DNAH14
PRPS1L1
GPRIN2
SLC22A7
ZCCHC14
LYST
ZNF148
ARHGEF17
PARD6B
RASGRP3
EEF1E1
FBXO28
LYZL1
JADE2
TWSG1
UACA
PRSS35
NBPF7
AGR3
THSD4
SLC35G4
GDAP1L1
VWC2
SPATA12
SEMA4A
RRAGC
LIPA
SLC26A8
NOMO1
WRAP53
TP53
LIG3
SGPL1
SLC16A8
CYP1A2
GOLGA6C
RPTN
RBM24
NOVA1
H1-7
ADGRL4
PPP1R3B
EPB41L2
SPDYE13
C11orf24
SPDYE9
SPDYE8
SPDYE15
SPDYE11
WNK4
TXNDC12
BTF3L4
MAN1C1
MARCHF3
VANGL1
MAP3K13
GRAP
SDK1
IL7R
MBD3L2B
GXYLT2
TMA7
CCDC51
BDH1
KLHDC10
TOPBP1
TF
ZNF107
TMPRSS13
DNAJC5
CCDC152
COA3
CNTD1
ATRIP
LOC107984974
MBD3L5
OR4K2
SMIM23
ZSCAN18
NOBOX
ZNF705G
ECE1
CTXND2
COPB1
MPRIP
HELZ
STYXL1
MDH2
SMDT1
PHETA2
NAGA
NT5C2
GTF2IRD2
AEBP1
GTF2IRD2B
PILRB
PGBD2
MINPP1
SF3B1
RABIF
GTF2H2
MTHFSD
FOXC2
CTAGE15
TSPAN11
OPRD1
C6
DUSP18
OR2T6
TMEM229B
BAIAP2
ESYT2
BTN3A3
GSDME
H2BC4
H2AC6
SPDYE21
SORL1
ZNF286A
PPP1R10
MRPS18B
ATAT1
STXBP4
COX11
TWNK
MRPL43
LZTS2
CDC42BPA
PLEKHH1
PRSS3
BBS7
PHKG1
KCNQ3
ARHGEF16
TRPV4
PGF
FBLN1
TOPAZ1
ARHGEF10L
CORO2B
CCDC88C
GAB2
ALDH3A2
EPB41L1
UBA5
ACAD11
C2orf78
PRTFDC1
MTRNR2L9
RETREG1
ERV3-1-ZNF117
ERV3-1
SEMA3E
DPP10
PAQR9
C7
SLC30A10
HAVCR1
LAMP3
CSNK1G2
HMGA1
RIPK1
PARL
STAP2
IGSF11
BTBD6
TTLL5
ERG28
MET
TEX55
PPIAL4G
TBC1D28
SLC22A4
C7orf61
NMRK2
OR51V1
KBTBD12
GRK7
FAM186B
TMEM243
USP25
SPRYD4
SLC38A9
CLN6
CARD11
RAB1B
PDIA5
FAM156A
CCDC116
AP2M1
CDR2L
CDC5L
TARBP1
HID1
REEP6
FANK1
SDF2L1
KLC2
C12orf66
XAF1
ATXN3
RBM39
EIF2AK2
CHRDL2
MGAT5B
LRRC15
OR2B11
FADS6
OR6C3
LARGE1
RNF213
GSTP1
NPIPB3
RASAL2
PISD
CAPRIN2
ADAM17
PARP6
RAPGEF5
PPFIA4
FAM221A
RSC1A1
KRTAP27-1
KRTAP23-1
VIT
DRICH1
NEURL1
C16orf54
DRC3
TREML2
GBX1
VDAC1
CCER2
DKK4
CD1E
NEK9
GABRB3
OR10J5
TPTE
CT45A9
CT45A8
CT45A7
CT45A6
CT45A5
CT45A2
ITIH5
PPP1R12B
GPR141
RNF139
TCF4
CBFA2T3
FOXO3
B3GALNT2
CCL3L3
CCL3L1
QSER1
CCDC146
SLCO4C1
SAC3D1
SHISA8
LRRC59
SOS1
PAPLN
PTGIR
SEMA4B
ATP6V0E2
LY86
KCTD1
MYO1D
RAX2
TAB1
C4B_2
C4B
KCNK2
FNIP2
FHIT
MRPL3
CD81
INCA1
POC5
ZNF75A
TIGD7
ZC3H12A
ANK1
BTBD9
BTG2
LAD1
ST3GAL1
ZDHHC11
DENND1B
SLC35A1
N6AMT1
TNIK
TARBP2
NPFF
MAP3K12
ZNF564
FGD4
GNG8
C8orf49
PLXNA4
LCE3E
HBEGF
PADI1
SFXN1
ERCC6
TTC16
PTRH1