ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188630 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◣ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RUNX3
DUX4
MAMDC2
BTNL9
MMP8
DRD4
COL23A1
FRG2C
MRPL3
CD86
GGT2
NRIP1
OR9A4
COTL1
H3-3A
BAGE5
BAGE4
BAGE3
BAGE
TBL1XR1
PHRF1
NCEH1
TCP11
GCLC
DTNBP1
SRGAP2C
SRGAP2B
TTC23
LRRC28
CNST
TFB2M
SPDYE2B
SPDYE2
NBPF15
FAM106C
KIF13A
RNF112
TEX12
IL18
NBPF1
FRMPD2
MARCHF11
PDE4DIP
B3GNT5
SENP8
MYO9A
GFM1
EPB41L2
SUGCT
MPLKIP
ZBTB38
SYT7
TRIM27
PRPSAP2
SPDYE1
GPX1
KDF1
CLPSL2
USP17L22
USP17L21
USP17L20
USP17L12
OR14K1
OR14A2
OR2B6
PKM
GUCA1C
SLC22A23
GCK
NBPF10
UQCC2
KIAA0319
POLR2J3
TMEM61
AFAP1
MEIS1
MECOM
GPR156
NFILZ
KCNIP4
ITIH2
TGFA
C21orf91
GABPA
ATP5PF
NEIL1
TAX1BP3
EMC6
ACYP2
PSME4
BAZ2A
ATP5F1B
DCHS1
PRAMEF11
PAK1IP1
C6orf52
ZNF318
RFESD
TMCC1
TREML2
COQ8A
MRPL39
MAPK13
CCDC33
TEX22
DLG1
GJA4
ESR2
KRTAP5-3
CBLIF
DSG3
DRC3
TOM1L2
ICA1
RALA
GRPEL1
RGPD2
RGPD1
ZNF780A
FOXL3
FCMR
SOX9
IFT46
ARCN1
ANKRD31
KCNK17
TNK1
SELL
NOS1
MYO15A
RSC1A1
ANP32A
KCNJ18
SPATS1
KCNE2
ERO1B
RNF44
CDHR2
EEF1E1
TNXB
HYAL4
ATP2C2
OR2T1
FERMT3
DEDD
PFDN2
NIT1
VWA3B
BTBD9
PRELID3A
HLA-E
PSMD2
EIF4G1
SLC6A3
GOLGA6L6
MYOC
PPP1R12B
AMN1
TBC1D5
SCAMP1
ZDHHC7
AGFG2
CTAGE8
CTAGE4
LRRC49
SHOX2
RSRC1
LARP6
HMG20B
CGA
CYP1A2
GIPC3
PARP9
DTX3L
POU5F1B
P2RY1
PTCRA
RASGRF2
MYOCD
H2AZ2
KRT1
LY9
ELK4
VMAC
NDUFA11
ZNF679
CACNB2
NFATC4
JAG2
SLC7A14
OR6F1
PNPLA1
ERCC6
PAX7
IQCF2
TPRA1
MBD3L4
MBD3L2
MLIP
POLR2H
CLCN2
SCAPER
OSR1
OR12D3
OR5V1
AADACL3
LRRC3C
TMEM117
PCGF5
PDE1C
TP63
RPA3
POP7
UACA
USP16
RWDD2B
TMEM71
STYXL1
MDH2
HHLA2
FGFBP3
ANO6
FAM241B
KIAA0513
NFKBIE
TMEM151B
EIF5A2
AGR3
FEZF2
ZNF718
ZNF595
HSF4
NFIX
TRADD
FBXL8
B3GNT9
POTEH
CPA5
CLDN17
GLCE
FEM1B
MLH3
OR10AC1
TRAPPC9
AGAP11
ADIRF
SNCG
MMRN2
SLC22A8
SEC62
FAM76A
PPIAL4H
PPIAL4G
NSRP1
SLC39A7
RXRB
RING1
HSD17B8
ABCD4
LMAN2L
SIPA1L1
TUBGCP6
HDAC10
CELF4
ROBO2
PTH1R
PTP4A3
C21orf62
SEC14L5
P2RY14
EPHA8
NCAM2
LGMN
STK38
CACFD1
CPA4
TMEM204
OR2T3
CCDC124
KPNB1
MFAP4
TRIM15
TRIM10
PLD6
ZBED2
C7orf65
AGR2
KRTAP6-1
KRTAP20-4
KRTAP20-1
LDHAL6A
GOLGA6B
RUVBL1
EEFSEC
TRIT1
PITPNM3
SELENOS
PLS1
CYP1A1
IMPG2
EGFLAM
AMPD3
RERE
CCDC102A
SLC2A8
ADGRG5
MIA
RAB4B
GCNT1
NAPA
P2RX5
FAM160A1
CD37
FAM177B
DNAJC5B
CRTAM
SRM
PTK2
EHF
CLECL1
OLIG1
GLDN
SBF2
EMID1
ADM
BHLHA15
GSK3B
GPR68
DPF1
MYEOV
EGR2
ADO
PLEKHA1
CRK
ALOX5AP
HELZ2
PTAFR
ATP12A
PIK3CG
HNRNPLL
CRYBB1
LMNA
RYK
RUNX1
FMNL3
NOTCH2NLC
BTRC
NOTCH2NLB
NOTCH2NLA
CLMN
PLK1
CLCF1
ABHD12B
LOC102724770
DGCR6
GRHL3
SUCLG2
CD2BP2
TPCN2
IFFO2
SEPTIN2
HDLBP
PTPN6
C12orf57
CNR2
SYS1
TP53TG5
HYLS1
ASB2
IFNLR1
RIN1
BRMS1
UBE2G1
ITGAE
SYTL3
DYNLT1
ZNRF1
RAB3GAP1
DENND2D
SMIM11B
SMIM11A
C12orf42
DDHD1
DEF8
VPS37C
IL17RA
CD44
SNX9
CHST12
DTX2
NIBAN3
UPP1
LNPEP
KCNK7
WDR74
STX5
ARIH2
SLC2A5
CTTN
ACTA1
MCTP2
BCL3
GCNT2
VOPP1
FCER1G
TOMM40L
APOA2
BID
TTC28
TTC21A
GORASP1
SMYD4
RPA1
TMEM229B
LDLRAP1
SYNE1
RNF111
DAG1
FCGR3A
WDR81
CEACAM16
PPFIBP2
ALCAM
EPYC
SNAPC3
ARHGEF12
ITK
SPATA4
GPR35
PTH2
GFY
FAM71B
ADAP1
ARID5A
FRA10AC1
IFIT3
IGLL5
LCP2
FCER2
CD28
RFC2
TUBB3
GNPDA1
MC1R
TRAPPC5
LSP1
PMEPA1
CCR1
CCL3
IL19
IL10
CYP1B1
AIPL1
CTSZ
ZNRF3
SH2B3
KMT2E
NDUFS6
MRPL36
GNA13
HSH2D
FGF2
TSHR
MPEG1
TMCC3
BLK
RORA
HMCES
KLRD1
COA6
TPCN1
IQCD
GCDH
PIK3CA
RSPH9
CLN3
APOBR
IL20RA
MAD2L1BP
GTPBP2
TCF7
FCRL4
CYP51A1
VPS37B
PARP15
TNIP2
NCKAP1
SMIM3
AFF3
HES1
DMWD
TMEM109
SSTR3
LYL1
DCDC2
PANK1
DOCK10
CLIC3
CDKAL1
RASA1
PRPF19
FBXO17
AMZ1
TNFRSF10A
ZBP1
LDLRAD4
RAD52
WNT10B
WNT1
RIN3
ESR1
SELPLG
NT5C1A
PDGFB
ACSL6
RAB8A
SPR
BAIAP2
PSIP1
SPRED2
SERF2
FLT3LG
YARS1
S100PBP
CHI3L2
DMPK
MB
SNTB2
ZFYVE28
PLCB1
LMO2
CUEDC1
PLEKHG6
ELL3
CXCR3
JAML
MACC1
NOTCH2
DDX3Y
SERINC2
UTRN
TUBG2
SEMA6A
TMEM53
ARMH1
KCNN3
DGKD
SMG6
UBE2E1
RABGAP1L
LARGE1
TUBG1
RETREG3
TIGIT
BANK1
ITGB7
STK17B
CFAP54
WFS1
TNF
PIP4K2A
LTA
LRP5L
GSPT1
TTC30B
ADAM22
PLEKHG1
CD209
VPS36
CKAP2
FOXN3
RFTN1
SORBS1
CCL4
RBSN
LAMC1
SPON2
RPS3A
RASSF5
LIMS1
ARHGEF3
ZNF791
ZNF490
ASAP1
LZTFL1
MYH9
CAMK1
SH3BP1
PIKFYVE
TADA1
SLC39A13
TOM1
NFKBIZ
HSBP1L1
TTC39C
RFFL
MAP1LC3B2
KCNJ15
GRAMD2B
KLHDC4
C1orf127
RGS1
PARP1
RHEX
MED31
C17orf100
SLC20A1
CASP8AP2
SYCP2L
GCM2
CRACR2A
OXCT2
MAD1L1
PRR5
APOBEC3B
DMXL2
HEXA
CALHM3
JAG1
FCRLB
USPL1
HMGB1
SRC
RNASET2
NDFIP2
LAMP3
PSMC3IP
PDE2A
MFF
MIGA1
NOP14
GRK4
PDXK
ATP2C1
DBNDD1
CD96
PLSCR2
IGSF6
IL4
GPR132
PSMA6
NTRK2
BIRC3
UPF1
CRLS1
STBD1
ITGAX
SLC24A1
RNF170
HOOK3
ZNF541
ADGRG1
MIA3
APBB1
UHRF2
TOX2
DUSP6
MGAT5
ABCD2
FZR1
SEC14L1
DOHH
DERL1
SNX20
NOD2
BMP5
CNIH1
GPR25
FASLG
BCL9L
PIGV
TSACC
CCT3
BTN3A2
TENT4B
PTPN3
THAP9
SEC31A
DNAAF1
ZNF705E
TMEM116
ERP29
CCND3
LAT2
SLC5A1
NRROS
SMIM34A
E2F7
SEPTIN9
EAPP
CFAP99
KLRG1
MCTP1
CCDC9
ZSWIM6
THEMIS2
CHD9
EFHB
PLD4
SMARCAL1
TANK
MNX1
LUC7L
FAM234A
GLDC
ACP5
ANXA4
ELOF1
BCL2L11
C12orf40
SUN1
AAK1
MGAT1
CAST
PTPN12
BHLHE40
ATP1A4
NOL4L
NCOA3
FABP5
SPTY2D1
LAMB4
STS
SLC37A3
ZNF302
ZMYM4
SLC3A2
GPR82
SYPL1
MGAT3
CD226
SDCCAG8
CEP170
CCIN
CDC42BPG
ADGRE3
RASSF2
DEFB108B
ST6GAL1
LAMC2
CYFIP2
ARID3B
PIMREG
RASGRF1
SLCO3A1
TJP1
GPR157
RBM47
PPM1M
ARHGAP31
ACSS1
TACC1
TARS3
SART3
ISCU
TMEM252
CMKLR1
LRRC47
SLFN12L
SIT1
ZBTB17
NPIPB6
ANXA6
PARVB
OGG1
CDCA7L
TMEM41B
ERI1
ATP1A1
LRP12
RPRD1A
SULT1E1
MUC13
STX10
IER2
NME7
BLZF1
IER3
FLOT1
MSGN1
JUND
KANSL1L
ALDH2
NOP53
GRIK4
NAA16
MTRF1
ESYT2
SPOP
NCF4
ATAD2B
CD82
WDR41
SUSD3
PKP2
NSUN6
ARL5B
TCTN1
ICAM1
CX3CL1
ASCL4
TAGAP
HNRNPA1L2
RAB38
MARCKS
CYB561A3
TMEM138
HECTD1
B4GALT1
ITCH
SMARCC1
FUCA1
DAZL
FRMPD4
SCGB1C2
SCGB1C1
AKNA
SRSF5
ST3GAL5
PNPLA5
IL17A
ASNS
KLK1
TRIM8
ABI1
SIRT1
SPINK2
VWC2
TIMM17A
LMOD1
CD55
ODF3
RNF125
PIK3R6
TNFRSF13B
FAM118A
STRADA
PSTPIP1
MEN1
ADD1
ECE1
ACTR3
ZNF341
EMP3
CCDC114
TC2N
ENPP5
FHAD1
CCDC113
CD38
POU2F3
SBF1
ZCCHC14
LIME1
JMY
SCAMP2
KIF2C
CEP68
SIGLEC5
MAP2K1
CLN5
PPP1R3B
PCMT1
XBP1
CLUAP1
IKZF3
COLEC10
GMEB2
TRIAP1
COX6A1
ICE2
DNAH10
SMAP2
BCO2
TNFRSF11B
GPR141
ADORA2A
SHQ1
CX3CR1
NLK
CREB1
RNF144A
LAIR1
CELF2
RAB11FIP1
TNIP3
CLNS1A
TMED7-TICAM2
TMED7
C3orf86
CLIC5
TRAF3IP3
CORO7-PAM16
CORO7
ZNF175
CD40
CYRIB
IL2RA
MYL2
CDH17
CD59
LRRC32
TSGA10
RARG
PLVAP
SUPT4H1
NSF
HGSNAT
FILIP1L
TNFRSF14
NPIPB9
LTBP2
IL6R
ITGA4
ZNF397
OST4
LOC102723996
ICOSLG
GNG7
PIGX
CEP19
ZNF770
ARHGAP27
EMILIN1
MYCBP2
CDH1
NPIPB8
NPIPB11
USP6NL
TPST2
PLAT
ETFB
AFF1
ZPBP2
RSBN1L
CLDN14
KHK
DUSP2
SPECC1
NUGGC
SMAD3
ANXA5
UCP3
LOC283710
RTL3
CD1A
WHAMM
FSD2
NKG7
MAPK1
GALM
CLDND2
EVL
NLRC3
PDP2
ARID5B
ABLIM1
TEPSIN
NDUFAF8
IGFL3
TAS2R50
GTF2A2
DPEP3
ELF2
RPS9
GGA2
RBM38
KIAA0930
RHOH
FOXO6
SLC4A4
GPR65
WBP2
AGK
PRODH
LOC102724788
ZFP3
ASTL
RAB36
SLC26A11
ARHGEF35
EZR
IL6ST
TNK2
RARA
CSK
VPS26B
TBC1D22A
NCAPD3
LGALS8
ECSCR
RGCC
FAM243B
FAM243A
SLC12A4
SLC37A1
RSPH1
TTLL12
ASAH2
ZYG11B