ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22955456 | HGC-27
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◣ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

DERL1
CDC14B
BCL9L
PKNOX2
AGTPBP1
LRATD2
TMEM259
CNN2
GSPT1
ZNF608
NEBL
RNF139
POGZ
CADM1
NWD1
MEOX1
TLE1
PALLD
LIN37
PROSER3
HSPB6
SELE
CDK15
PPFIBP2
ICAM2
ZNF839
PSIP1
ARHGEF17
ATAD2
COA6
KMT2A
GRHL3
MAMDC2
HSD17B12
LTBP1
BTRC
GXYLT2
DUX4
PGK1
STING1
SERTAD2
TDO2
OMD
CDH7
AMOT
ESRP2
PLA2G15
TMEM209
SSMEM1
NIBAN2
SLC44A1
MSX2
ZMYM4
TBCB
POLR2I
OVOL3
TATDN1
NDUFB9
LAMB2
SLC2A8
CCN5
IL1F10
NFKB2
SHOX2
RSRC1
HOXA3
CYP1B1
LNPEP
COASY
HSD17B1
MLX
GOLIM4
MT1F
MT1B
TRIP11
SEMA3D
PRKCI
AVPI1
HELLS
KIAA2012
ALPP
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
AGA
LFNG
KLRK1
DSTYK
MT4
MBNL3
SNTB2
EXD2
PPP1R3A
BPIFB4
GABPB1
MYBPC3
TENM2
KMT2E
TMEM17
LRIG2
PI15
NOL4L
HHLA2
LIMA1
B9D1
MAPK7
MFAP4
GSR
CLDN14
THUMPD3
TTC8
DENND2B
AKIP1
RSPH9
MAD2L1BP
GTPBP2
SLC16A4
ANKS6
BCL3
TRIM48
RARG
SCNN1A
LTBR
COPS4
ST6GALNAC3
MFF
CCND3
TAF8
FLRT2
PTPN13
NEFL
DSEL
FTL
VPS41
SHISA4
FAF2
PRPSAP1
PACSIN2
EFHD1
RPS8
RIMKLB
CRABP2
CPN2
PIGK
TMEM65
HRCT1
SPAAR
SEMA6D
SMDT1
PHETA2
NAGA
TMEM205
CCDC159
RAB3D
TCF7
ZNF181
TBC1D2
ECI1
YEATS4
LYZ
LMO7
PPA1
TYRP1
DSE
OLFML3
GPAA1
EXOSC4
BAMBI
MORF4L2
RXRA
TNRC6B
CCDC130
ATP2B4
B2M
PRG3
PRG2
LDLRAD4
SLC13A2
IMPDH1
H2AX
DPAGT1
HMBS
EMP3
CCDC114
COLEC12
THOC1
PCOLCE2
ARRDC4
TMEM229B
COX20
PLEKHH1
FAT1
TCF12
HECTD2
PCDHA6
PCDHA5
SFXN5
GTPBP3
ANO8
CCNI
HYLS1
ALDH2
USP30
PGPEP1L
B3GALT4
VPS52
RPS18
KIF2C
CST3
THBS3
MTX1
PITPNM2
CCDC200
BID
NUF2
SLC7A8
TUBB3
MC1R
DHX8
ACTB
ADCY7
ZNF529
LSM14B
GAPDH
PMF1-BGLAP
PMF1
WIF1
CYB5R2
USH1G
OTOP2
RPL29
SP7
SULF2
CDRT4
ENPP2
ZNF83
PUM2
SPACA9
AK8
KBTBD6
TMEM179
SYT12
STMN3
RTEL1
CDK5RAP1
GOLGA3
SUGCT
MPLKIP
CDC42EP4
ZBED9
NKIRAS1
HOOK2
NR1D2
MUC3A
HOXA2
OR10G3
ZNF398
CMTM2
DCT
H1-2
H3C3
COBLL1
PIKFYVE
CCDC88A
PPM1A
TIGAR
SERPINF1
SLC26A11
GTF2A2
ASPSCR1
WWC3
CERK
CAV1
ARHGAP19
TPR
ODR4
TMBIM4
CTDSPL2
MCC
WDR24
JMJD8
STUB1
MRPS22
DACH1
ARHGEF3
KCNJ4
KDELR3
NKD2
ARHGEF2
ARHGEF10L
FIGNL1
PDP2
ZZZ3
DCN
LRRC58
TRAF7
RAB26
SPAG9
PPT1
ADRB1
DAP
TENT4B
ENOSF1
NRP1
CSNK2A3
TUBA1C
AHRR
PHLPP1
MTBP
MRPL13
PBLD
HNRNPH3
LOXL1
ARL6IP1
NRDE2
STON1-GTF2A1L
HOXA11
STON1
KATNAL1
HOXB2
ELAVL3
ALAD
POLE3
C9orf43
LOC102724770
DGCR6
TTLL12
TFAM
SLX4IP
MKKS
PLEKHF1
TRABD
IFNG
PAPLN
EXOSC2
FAM8A1
PIM1
TNPO2
JUN
NAT10
CAMSAP2
MMS22L
PRTN3
ELANE
AP2A2
EDN2
FLCN
ICA1L
PCNP
RNF138
CORO2B
FLNB
PMS2
AIMP2
TRAF4
ZNF561
CALM2
DISP1
NPTX1
SERF2
SEPTIN9
MYL12A
MAP3K7CL
CCT8
SERINC4
HYPK
CARMIL1
WNT7B
KSR1
PDE4DIP
MEIG1
DCLRE1C
EAPP
MOB3A
IZUMO4
PBX3
VCAM1
SORBS3
KMT2B
ARID3B
ISL1
DRD4
MPC1
SCT
CDHR5
RUSF1
PARVG
ARRB1
MICOS13
HSD11B1L
RPL36
KDM3B
LRRC29
RPL38
TTYH2
IER3
FLOT1
PAM
LEF1
THAP9
SEC31A
EHD1
ILF3
KCNN1
POMZP3
NAGLU
WNT5A
SLC26A7
RMND5B
RCOR1
DCLRE1B
AP4B1
SIPA1L1
USP50
CSF1R
MPO
TRIB1
SLC7A11
NPTN
ZFYVE28
CFAP99
LGALSL
MATK
OR2T1
H3C4
H4C4
H2BC6
WWOX
UNC93B1
TFF3
ARHGDIB
ALDH3B1
MOV10L1
MLC1
MAN2B2
ERP27
TMEM97
NOTUM
FMN1
NSFL1C
PPP2R5A
RNF125
SCD
S100A9
GLI2
KDM3A
GCFC2
ZKSCAN2
SYBU
TMC8
TMC6
ABCB6
C17orf99
CS
H4C14
H3C15
H3C14
SVBP
ERMAP
N6AMT1
KCNA4
DEK
NFX1
RDX
GTF3C5
GSX2
SLC35D1
YAP1
ANGPTL4
SH3BP4
EXOC2
R3HDM4
POFUT2
UTP23
JRK
PSCA
WDR74
STX5
LRP5L
DYNC2H1
SKA2
PRR11
ESYT2
DYNC2I1
KANSL2
RAB30
NELFA
FZR1
DOHH
NME7
BLZF1
DSCC1
H2AC7
H4C5
H2BC7
GLRA1
SMARCC2
B3GLCT
WASHC5
NSMCE2
RUNX1T1
ABRAXAS1
KIAA1522
GSE1
FBXO32
RUNX3
EGFLAM
AMPD3
RERE
CCDC102A
ADGRG5
MIA
RAB4B
GCNT1
NAPA
P2RX5
FAM160A1
CD37
FAM177B
DNAJC5B
CRTAM
SRM
PTK2
EHF
CLECL1
OLIG1
GLDN
SBF2
EMID1
ADM
BHLHA15
GSK3B
GPR68
DPF1
MYEOV
EGR2
ADO
PLEKHA1
CRK
ALOX5AP
HELZ2
PTAFR
ATP12A
PIK3CG
HNRNPLL
CRYBB1
LMNA
RYK
RUNX1
FMNL3
CLMN
PLK1
CLCF1
ABHD12B
SUCLG2
CD2BP2
TPCN2
IFFO2
SEPTIN2
HDLBP
PTPN6
C12orf57
CNR2
SYS1
TP53TG5
ASB2
IFNLR1
RIN1
BRMS1
UBE2G1
ITGAE
SYTL3
DYNLT1
ZNRF1
RAB3GAP1
DENND2D
SMIM11B
SMIM11A
C12orf42
DDHD1
DEF8
VPS37C
IL17RA
CD44
SNX9
CHST12
DTX2
NIBAN3
UPP1
KCNK7
ARIH2
SLC2A5
CTTN
ACTA1
MCTP2
GCNT2
VOPP1
FCER1G
TOMM40L
APOA2
TTC28
TTC21A
GORASP1
SMYD4
RPA1
LDLRAP1
SYNE1
RNF111
DAG1
FCGR3A
WDR81
CEACAM16
ALCAM
EPYC
SNAPC3
ARHGEF12
ITK
SPATA4
GPR35
PTH2
GFY
FAM71B
ADAP1
ARID5A
FRA10AC1
IFIT3
IGLL5
LCP2
FCER2
CD28
RFC2
GNPDA1
TRAPPC5
LSP1
PMEPA1
CCR1
KIF13A
CCL3
IL19
IL10
AIPL1
CTSZ
ZNRF3
SH2B3
NDUFS6
MRPL36
GNA13
HSH2D
FGF2
TSHR
MPEG1
TMCC3
BLK
RORA
HMCES
KLRD1
LGMN
TPCN1
IQCD
GCDH
PIK3CA
CLN3
APOBR
IL20RA
FCRL4
CYP51A1
VPS37B
PARP15
TNIP2
NCKAP1
SMIM3
AFF3
HES1
DMWD
TMEM109
SSTR3
LYL1
DCDC2
PANK1
DOCK10
CLIC3
CDKAL1
RASA1
PRPF19
FBXO17
AMZ1
TNFRSF10A
ZBP1
RAD52
WNT10B
WNT1
RIN3
ESR1
SELPLG
NT5C1A
PDGFB
ACSL6
RAB8A
SPR
BAIAP2
SPRED2
FLT3LG
YARS1
S100PBP
CHI3L2
DMPK
MB
PLCB1
LMO2
CUEDC1
PLEKHG6
ELL3
CXCR3
JAML
MACC1
NOTCH2
DDX3Y
SERINC2
UTRN
TUBG2
SEMA6A
TMEM53
ARMH1
KCNN3
DGKD
SMG6
UBE2E1
RABGAP1L
LARGE1
TUBG1
RETREG3
TIGIT
BANK1
ITGB7
STK17B
CFAP54
WFS1
TNF
PIP4K2A
LTA
TTC30B
ADAM22
PLEKHG1
CD209
VPS36
CKAP2
FOXN3
RFTN1
SORBS1
CCL4
RBSN
LAMC1
SPON2
RPS3A
RASSF5
LIMS1
ZNF791
ZNF490
ASAP1
LZTFL1
MYH9
CAMK1
SH3BP1
TADA1
SLC39A13
TOM1
NFKBIZ
HSBP1L1
DLG1
TTC39C
RFFL
MAP1LC3B2
KCNJ15
GRAMD2B
KLHDC4
C1orf127
RGS1
PARP1
RHEX
MED31
C17orf100
SLC20A1
CASP8AP2
SYCP2L
GCM2
CRACR2A
OXCT2
MAD1L1
PRR5
APOBEC3B
DMXL2
HEXA
CALHM3
JAG1
FCRLB
USPL1
HMGB1
SRC
RNASET2
NDFIP2
LAMP3
PSMC3IP
PDE2A
MIGA1
NOP14
GRK4
PDXK
ATP2C1
DBNDD1
CD96
PLSCR2
IGSF6
IL4
GPR132
PSMA6
NTRK2
BIRC3
UPF1
CRLS1
STBD1
ITGAX
SLC24A1
RNF170
HOOK3
ZNF541
ADGRG1
MIA3
APBB1
UHRF2
TOX2
DUSP6
MGAT5
ABCD2
SEC14L1
SNX20
NOD2
BMP5
CNIH1
GPR25
FASLG
PIGV
TSACC
CCT3
BTN3A2
PTPN3
DNAAF1
ZNF705E
TMEM116
ERP29
LAT2
SLC5A1
NRROS
SMIM34A
PKM
E2F7
KLRG1
MCTP1
CCDC9
ZSWIM6
THEMIS2
CHD9
EFHB
PLD4
SMARCAL1
TANK
MNX1
LUC7L
FAM234A
GLDC
ACP5
ANXA4
ELOF1
BCL2L11
C12orf40
SUN1
AAK1
MGAT1
CAST
PTPN12
BHLHE40
ATP1A4
NCOA3
FABP5
SPTY2D1
LAMB4
STS
PPP1R12B
SLC37A3
ZNF302
SLC3A2
GPR82
SYPL1
MGAT3
CD226
SDCCAG8
CEP170
CCIN
CDC42BPG
ADGRE3
RASSF2
DEFB108B
ST6GAL1
LAMC2
CYFIP2
PIMREG
RASGRF1
SLCO3A1
P2RY14
TJP1
GPR157
RBM47
PPM1M
AMN1
ARHGAP31
ACSS1
TACC1
TARS3
SART3
ISCU
TMEM252
CMKLR1
LRRC47
SLFN12L
SIT1
ZBTB17
NPIPB6
ANXA6
PARVB
OGG1
CDCA7L
TMEM41B
ERI1
ATP1A1
LRP12
RPRD1A
SULT1E1
MUC13
FRG2C
STX10
IER2
MSGN1
JUND
KANSL1L
NOP53
GRIK4
NAA16
MTRF1
SPOP
NCF4
ATAD2B
CD82
WDR41
SUSD3
PKP2
NSUN6
ARL5B
TCTN1
ICAM1
CX3CL1
ASCL4
TAGAP
HNRNPA1L2
RAB38
MARCKS
PITPNM3
CYB561A3
TMEM138
HECTD1
B4GALT1
ITCH
SMARCC1
FUCA1
DAZL
FRMPD4
SCGB1C2
SCGB1C1
AKNA
SRSF5
ST3GAL5
PNPLA5
IL17A
ASNS
KLK1
TRIM8
ABI1
SIRT1
SPINK2
VWC2
TIMM17A
LMOD1
CD55
ODF3
PIK3R6
TNFRSF13B
FAM118A
STRADA
PSTPIP1
MEN1
ADD1
ECE1