ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932073 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◣ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
RARA
PDZK1
FKBP4
CASP7
VASN
MYOG
DGKZ
ADAMTSL5
RAPGEFL1
KCNK6
RPS6KL1
LMAN1L
RNF223
FREM2
SYT12
N4BP3
PARD6B
NFKBIA
TH
FOXK1
SNX24
TPD52L1
MAP3K14
OVOL2
C1QTNF1
CYP1B1
FAM102A
HAAO
TIPARP
SFXN2
ARL3
AMZ1
AKAP1
CCDC88C
TFF1
SGK3
CXXC5
C19orf33
CHPT1
EDF1
NAB2
PDGFA
ITPK1
CTBP1
ARMCX6
LY6E
FRG2C
HAPLN2
NBPF1
MANEAL
CAP2
RAB40C
MCF2L
GPRIN1
C1QTNF6
MIDEAS
CTAG2
SLC25A24
USP31
KDM4B
LRRFIP2
OLFML3
APOA1
PAK4
PTPA
CRAT
TTC39A
STK11
MSMB
KEAP1
MYB
CST6
ZNF185
LRRC56
HRAS
TMEM229B
PLEKHH1
SEPTIN9
UNKL
SLC25A45
B3GNT6
DUX4
AFF1
GRM4
LYPD6B
PLIN5
LRG1
ADAM8
RECQL4
LRRC14
CUEDC1
SCOC
KIF21A
RPS28
NDUFA7
UPF1
CCN5
KRT85
UHRF1
PDE4DIP
CABLES2
TJAP1
DOK7
ADGRG1
CRKL
LAMC1
TIFA
KIAA0319
IPPK
PKP3
SLC9A3R2
CHSY1
CELSR2
SLC25A36
ESR1
SPTBN4
BLVRB
ZFP36
PLEKHG2
B4GALT1
FBP1
CDK3
CLIC3
ELF1
ANXA9
TPD52L2
ABHD16B
ZBTB37
ACIN1
TMEM92
SGCA
CLASP2
SLC25A42
PSD4
SNAI1
CBWD5
CBWD3
CBWD6
ELAPOR1
C1orf194
CASTOR1
TBX2
VPS26C
DMRT2
ABAT
ACSS1
RGL3
MICOS10-NBL1
MICOS10
LRP5L
ASB2
VWA2
PLXNB1
RGS10
TTC6
FOXA1
FMN1
ARHGEF18
FOXK2
LATS1
MRGPRG
CCR6
FRG2
MACC1
TCIRG1
MGAT3
SLC25A19
GRIK3
MFSD10
NIPSNAP2
SBNO2
EDN1
HSPB8
SULT2B1
CDC34
C20orf203
SPOP
PDE4C
SLC26A1
IDUA
MAD1L1
C16orf74
IL2RB
TST
MPST
ANKRD2
FST
DSN1
ABCC11
TFAP2C
PRDX1
AKNA
ZBTB45
HDAC11
ZBTB46
TRH
TSKU
ARHGEF16
SYNE3
FUT4
PNKD
FABP3
CDC42EP1
SPATS2L
SCARB1
RERG
PRUNE1
MINDY1
TUBA3E
USF2
TSEN54
CASKIN2
DNPEP
CCNP
FOXO6
ARID5B
EFHD2
TP53I3
B3GALNT1
PERP
SVIL
PRSS27
DOT1L
MYLK2
CDR2L
MCRIP2
RHOD
RCOR3
NEFH
ZNF346
SYT8
MTA1
PDLIM2
CCDC200
RNPEPL1
ANKMY1
KAT6B
ATP6AP2
NT5DC3
SERPINA1
SERPINA6
ZNF710
UMODL1
CBFA2T3
ZBTB7A
IL24
BMP7
GPSM1
FBXW8
SLC25A47
FAM214A
NPIPB9
ZFYVE28
CFAP99
ZBTB7B
ROBO3
DHRS3
TUBA3D
IVD
LFNG
PXDC1
DNMT3A
UGT2B15
NPEPPS
SLC37A1
VEPH1
TNS1
DECR1
REM2
NR2F6
TBKBP1
C1orf162
EHF
TAX1BP1
LTBP1
SLC1A5
LAMB2
FECH
MTRNR2L1
PTH1R
GFAP
DDX10
DLG4
ACADVL
CYP4F11
AP1B1
INS-IGF2
INS
C9orf139
ABCA2
STMN3
RTEL1
OXT
CLCN4
SH2D3C
VCAN
HSPB1
PTGES
SLC22A5
GPC6
ITPRIPL1
NDRG1
PI4KB
NFE2L1
DHX37
BRI3BP
PLCD3
ACBD4
NPIPB6
NTMT1
C9orf50
TMEM210
LRRC26
TTC39C
SPRY4
SLC45A4
SEMA3B
SVEP1
NR2F2
OBSL1
INHA
ITGB2
ATXN1
PCTP
ZMYND11
DMPK
AMOTL2
COLEC12
SH3GLB2
MYZAP
GCOM1
ARHGEF10L
SLC37A3
TMEM95
KCTD11
B3GNT3
UBALD1
FOXN1
TDRD9
IKBKG
G6PD
CGN
NLRP6
AMBP
TNK2
ZBTB5
SCGB3A1
ZNF746
RNF144A
SLC29A1
BCL3
HK1
PDCD6IP
TUBA1A
PTPRH
TJP3
RCAN1
JARID2
SCAMP4
ADAT3
ABCB8
CYP4F2
SNX10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
STC2
SDC1
RAI14
TWF2
PRSS8
MUC3A
HSPA4
SULT1A4
SULT1A3
BOLA2
BOLA2-SMG1P6
LENG1
NXNL2
PPP2R2C
PGLYRP2
EIF5AL1
RASEF
MAGI3
OGG1
LRRC58
CYP1A1
VWA1
MTUS1
TMED8
SAMD15
CALML5
ERN1
YPEL2
COX7A2L
RORC
GRAMD1A
ELFN2
CFAP206
ZCWPW1
MEPCE
PPP1R35
PABPC1
TXNRD1
RNF170
HOOK3
EXT2
TBXA2R
PADI3
ABCD3
CYB561
SLC16A3
EMP2
WNT16
LASP1
PMEPA1
P2RX2
AGR3
FNIP2
KLHL14
OAZ3
TRIM16L
GLRX5
COL18A1
AHCYL1
SLC6A6
MEF2A
SHCBP1
RPL7L1
AMT
TFAP2A
AHCY
TRPM7
ESRP2
SHANK2
FSIP1
EPPK1
CLPSL1
BHLHE40
NAIP
SETD2
IMPA2
SEMA4G
PLEKHG5
CIB2
CSK
LCN8
LCN15
USP17L20
USP17L22
UBL4A
SLC10A3
GAA
ASPG
ZC2HC1C
ACYP1
S100P
GPR153
UBE2H
EOLA1
HSFX3
FAM234B
MAB21L4
HSH2D
MACROH2A1
SH3YL1
ACP1
RPS6KA2
CLDN2
DLC1
KLRC3
RGS3
MOCS1
NBPF12
ACACB
HSFX4
KRT13
GUCA2A
FRMD5
PATJ
RALGPS2
SEMA3F
MN1
POU2F3
COX5A
SPATC1L
WDR74
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
MAMDC2
SP2
TLE1
PMF1-BGLAP
PMF1
MUC1
NRP1
LIMS1
LOC102723996
ICOSLG
MAT1A
ADARB1
RGPD2
RGPD1
MTRNR2L9
SPAAR
LONRF2
GZF1
MTRNR2L10
EMILIN2
POLR3F
DZANK1
ADORA1
EPN1
DNM2
PCYT1A
IER5L
TMEM212
IL20
UNC45B
LEMD2
LIMS4
TRIM48
RFX1
NLK
DHRS2
HNRNPL
FGFBP2
BAMBI
JPH2
ELOVL2
OSBP
CRYAA2
CRYAA
C3
CDH18
CSF3
MARCHF10
RHOBTB1
EVI5L
MTRNR2L6
NBPF15
CALHM4
ME3
APOC3
FADD
TOM1L2
DRC3
HOMER2
EHD1
ANXA2
PRSS22
ARFGEF2
KLRF2
CIC
GATAD2A
RBM43
SSTR2
ZNF687
ZNF552
MAPKAPK5
PPP2R5E
PABPN1
PRDM4
LGR6
SHCBP1L
FARSB
RABL6
OPRL1
LKAAEAR1
TSPAN5
PCIF1
FBH1
ANKRD16
PAX9
TPBG
KAZN
ZSWIM6
CRK
ZNF385B
CDH11
PTP4A2
ARHGAP29
PTMA
ENTPD8
PALLD
POLDIP3
PAQR5
HUWE1
ABCA3
TMEM107
FUS
SPATA9
RHOBTB3
H3C15
H3C14
H2AC19
H2AC18
ZNFX1
RAB31
RPEL1
MIDN
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ADCY9
HSP90AB1
KHSRP
CNOT3
DNMBP
KLF10
MICAL3
USP17L15
UNC5B
RBBP5
USP17L11
USP17L21
USP17L12
BATF
PAX4
PKIB
ADD3
ANAPC7
NUP85
GJD3
TTC21B
TM7SF2
H2BC5
H1-4
INAVA
LHX4
SASH3
USP17L18
EXOSC5
BCKDHA
SRSF7
TCF21
CACNA1H
H4C14
TRAF7
RPS29
GPD1L
MEIS1
SH3BGR
LCA5L
SLC19A1
ACBD6
GTF2B
AZGP1
ANGEL1
ENKUR
DYSF
SLC25A25
NAIF1
SMAD3
UBE2I
KCNK7
SART3
ISCU
C19orf48
ATP5MG
RAB5B
HRK
UFM1
TRIM2
B2M
PNO1
SF3B3
COG4
FBN1
ZNF91
IRF2BPL
UBE2L3
MYH11
PHF13
AKT1
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
MRPS7
GGA3
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
H4C11
H4C12
C1orf198
NVL
DLL3
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
SULT1A1
EIF3E
RPS27
RAB13
KCTD1
ID1
SP1
SUN5
RP1
BPIFB2
PROP1
KRT36
KRT24
C20orf204
NR0B2
GADD45B
IL17RB
CHDH
APPL2
SLC7A2
SLC27A2
RABL2B
FBXO34
CACTIN
NCOA7
STAM
H4C15
HOGA1
GAGE2A
TANGO6
LARP1
H2AX
SCD
TOB1
TRAF2
SKP1
NME6
FAM187A
EFTUD2
CCDC103
MBD6
FGF18
DDIT3
C4orf19
TLE3
WDR97
MAF1
NDRG2
ARHGEF40
PPP1R10
MRPS18B
PKM
PHACTR2
SRSF2
MFSD11
H2BC12
H2AC12
NUDT4B
NUDT4
NUP214
MED12L
SHANK1
CLEC11A
HP1BP3
RUNDC3B
FIBCD1
ARRB1
PLGRKT
PDHX
APIP
SEC14L5
RPLP1
H2BC21
H2AC21
H2AC20
WNT4
HSPA9
EIF1
PROSER1
NHLRC3
ZBTB4
SLC35G6
SEC14L2
POLR2A
BTG1
UQCRH
LRRC41
UPF2
JUND
ARRDC2
LOXL4
RAD23A
RAB11B
MT2A
RABL2A
SESN1
SBSN
GAPDHS
MACIR
GAGE2B
TBC1D10B
MYLPF
FAM78B
FAM3C
SEC61B
RPS20
ADAMTS8
RPL27
BASP1
NOTCH2NLC
NOTCH2
CALM2
SRD5A1
RPS2
RNF151
NSUN2
CEBPD
VIT
OVOL1
AP3M1
ADK
CDH1
ASXL1
ACE
GEMIN4
UPK3A
TMEM17
TMEM238
RPL28
HADHB
HADHA
SOCS3
CYP3A43
RPLP0
PTPRN2
P2RX7
LRIG2
PLXNB2
JUN
GSTA4
JAKMIP1
IPO13
SLC46A3
SLC35B1
PHF3
NUDT9
TRIP10
GPR108
BCKDK
WNT7B
ERG
EEF2
TIAF1
SYNGR1
ASGR2
LETM1
IQGAP2
EOMES
BCAT1
ZC3H10
RPL41
POLR2J3
OR2T1
STAM2
JUNB
H2BC11
H2AC11
FILIP1L
GFOD1
SIMC1
REXO1
STIP1
S100A10
NFKBIL1
DDX39B
ATP6V1G2
WIZ
PSMB3
PCGF2
CSRNP1
BCAR3
MAT2A
TBCK
POFUT1
PLAGL2
MVB12B
AIMP1
CCR7
CCNO
TTC8
TRIM45
TMEM120A
FAM53C
CDC25C
MLPH
OXCT2
MS4A6E
OPRD1
TSPOAP1
PRKACA
BFSP1
SMC2
HEXIM1
DTNB
POLR3E
NME1
NDUFS7
TOR1AIP2
ID2
TCF7L2
LPIN1
LUC7L2
FMC1-LUC7L2
FMC1
DENND1B
DDB2
RNF149
PPFIBP2
CAPN13
PSMD1
MIPOL1
ZNF823
TJP1
H1-7
PKD2L2
USP53
TMEM60
PHTF2
GPAM
VDAC2
RCC1
SH2D4B
AK2
EIF4G2
ATXN7
IER3
FLOT1
H2BC8
H2AC8
DDX5
CEP95
CHST11
MAGOH
SUPV3L1
STRIP1
RBM17
PLEC
IMPDH2
GPR137
GNA12
TUBB4B
TP53I11
PIP5K1B
MEI4
FBXO31
PUM2
NR2C1
DCLK2
CEP295NL
ADPGK
SLC2A11
HNRNPH1
RAB7A
KCNB2
DICER1
EIF4A1
LYRM4
H4C2
H3C2
FRAT2
FARS2
RPS6
EIF4E3
NAT10
CIRBP
ARMH4
METTL16
RPS12
PLAGL1
JAK1
TRIM55
NFE2L2
STK40