ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932074 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◣ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

CASP7
GREB1
RARA
PARD6B
PDZK1
MYOG
FKBP4
ADAMTSL5
RPS6KL1
N4BP3
KCNK6
VASN
MCF2L
RNF223
TH
FOXK1
RAPGEFL1
C1QTNF1
LMAN1L
SNX24
FREM2
EDF1
SYT12
CTBP1
MANEAL
HAAO
TFF1
MAP3K14
SLC25A24
DGKZ
OVOL2
TPD52L1
B3GNT6
AKAP1
DUX4
FRG2C
CHPT1
CCDC88C
C19orf33
SGK3
NAB2
CYP1B1
HAPLN2
C1QTNF6
SFXN2
ARL3
CXXC5
PDGFA
TIPARP
CTAG2
KDM4B
MYB
LRRFIP2
CABLES2
PTPA
CRAT
GPRIN1
LAMC1
ZNF185
TMEM229B
PLEKHH1
FRG2
STK11
AMZ1
USP31
SLC25A36
CAP2
MSMB
NBPF1
ITPK1
LY6E
KRT85
SLC9A3R2
CRKL
APOA1
UPF1
NFKBIA
MTRNR2L1
ARMCX6
FAM102A
PDE4DIP
ESR1
CLIC3
CELSR2
MIDEAS
SLC25A45
SPTBN4
BLVRB
DOK7
TTC39A
RGS10
KEAP1
TFAP2C
LYPD6B
AFF1
SCOC
VPS26C
OLFML3
IPPK
FBP1
UMODL1
CST6
TMEM92
CCN5
PLIN5
LRG1
RAB40C
DMRT2
TBX2
LRRC56
HRAS
SEPTIN9
KIF21A
ADAM8
UNKL
KIAA0319
SPOP
DECR1
TIFA
CUEDC1
PAK4
PKP3
FST
SLC25A42
CBWD5
CBWD3
CHSY1
UHRF1
C1orf162
FMN1
VWA2
ELF1
SPATC1L
CBWD6
CCR6
WDR74
ARHGEF18
ZBTB37
ABAT
FOXK2
MAD1L1
CCDC200
ABCC11
SPATS2L
ACSS1
TJAP1
MTRNR2L2
MSH3
DHFR
GRIK3
DHX37
BRI3BP
SBNO2
MICOS10-NBL1
MICOS10
EHF
SLC25A47
TTC6
FOXA1
MACC1
PDE4C
ZFP36
PLEKHG2
DNPEP
SNAI1
GRM4
COLEC12
CLASP2
ADGRG1
MTRNR2L8
B4GALT1
UGT2B15
LRP5L
TRH
TCIRG1
RECQL4
LRRC14
PSD4
SERPINA1
ANXA9
RCOR3
LATS1
CDK3
PRDX1
KAT6B
ACACB
BMP7
RPS28
NDUFA7
FUT4
TUBA1A
C16orf74
SGCA
MFSD10
TPD52L2
ABHD16B
NPEPPS
YPEL2
RERG
ASB2
AGR3
TMED8
SAMD15
SVIL
SYNE3
HDAC11
COL23A1
MRGPRG
ANKRD2
ACIN1
MAMDC2
GPSM1
CBFA2T3
IKBKG
ELAPOR1
C1orf194
SULT2B1
SLC26A1
IDUA
DSN1
PTGES
ZBTB46
RGL3
ATP6AP2
TSKU
VCAN
EFHD2
SYT8
IL2RB
GPC6
GFAP
SP2
SLC22A5
MGAT3
SEMA3B
VEPH1
ZNF346
EDN1
MUC3A
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
DHRS3
B3GALNT1
PMF1-BGLAP
PMF1
NT5DC3
PPP2R2C
MUC1
TP53I3
SERPINA6
PNKD
FAM214A
SVEP1
NRP1
IL24
LIMS1
TBKBP1
PRUNE1
MINDY1
CFAP206
UBALD1
PERP
NXNL2
SLC25A19
ARID5B
HSPB8
LRRC58
NPIPB9
ZBTB45
CDC34
PRSS27
LOC102723996
ICOSLG
PXDC1
CASTOR1
MAT1A
ADARB1
TFAP2A
G6PD
PLXNB1
AKNA
TUBA3D
NDRG1
TMEM210
LRRC26
CYP4F2
RGPD2
RGPD1
MTRNR2L9
SPAAR
WNT16
SCGB3A1
MAGI3
REM2
LONRF2
TUBA3E
COX7A2L
PGLYRP2
MCRIP2
GZF1
C20orf203
ZFYVE28
NEFH
CFAP99
DNMT3A
EIF5AL1
TST
MPST
SHANK2
MTRNR2L10
LFNG
SLC1A5
SCARB1
TTC39C
EMILIN2
CDC42EP1
POLR3F
DZANK1
DOT1L
ADORA1
EPN1
USP17L20
RNF144A
TAX1BP1
TMEM95
KCTD11
DNM2
PCYT1A
IER5L
STMN3
RTEL1
CYP4F11
MYLK2
TMEM212
NR2F2
ARHGEF16
HK1
USP17L22
GRAMD1A
IL20
UNC45B
LEMD2
ROBO3
ERN1
LIMS4
TXNRD1
FBXW8
PTH1R
HSPA4
RPS6KA2
CDR2L
SPRY4
USF2
TRIM48
RFX1
ELFN2
TDRD9
FSIP1
OBSL1
INHA
CLCN4
ZNF710
TSEN54
CASKIN2
INS-IGF2
INS
AP1B1
SLC45A4
DDX10
NLK
CLDN2
RHOD
SLC37A3
AMBP
DHRS2
HNRNPL
ATXN1
FGFBP2
TNS1
BAMBI
RNF170
HOOK3
JPH2
DMPK
ELOVL2
LTBP1
RNPEPL1
OSBP
ANKMY1
CRYAA2
CRYAA
DLG4
FOXN1
FRMD5
RCAN1
C3
CDH18
EXT2
TBXA2R
CALML5
CSF3
PI4KB
MARCHF10
RHOBTB1
ACADVL
EVI5L
RALGPS2
MTRNR2L6
NR2F6
SDC1
SLC29A1
ZBTB7A
FABP3
BCL3
ABCB8
UBL4A
SLC10A3
NBPF15
OAZ3
PABPC1
RGS3
CALHM4
ME3
DLC1
ZMYND11
APOC3
NAIP
UBE2H
SNX10
KRT13
FADD
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
NBPF12
HOMER2
EHD1
ANXA2
PRSS22
ITPRIPL1
ARFGEF2
FNIP2
KLRF2
CIC
NTMT1
PDLIM2
GATAD2A
PMEPA1
ITGB2
RBM43
VWA1
SSTR2
PLCD3
ACBD4
ZNF687
TWF2
FOXO6
C9orf50
ZNF552
MAPKAPK5
MEF2A
PPP2R5E
PABPN1
PRDM4
ASPG
FAM234B
JARID2
LGR6
SHCBP1L
FARSB
C9orf139
ABCA2
SLC37A1
TRPM7
ARHGEF10L
ZBTB7B
RABL6
OPRL1
LKAAEAR1
ZNF746
TSPAN5
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
HSFX3
TPBG
KAZN
ZSWIM6
CRK
ZNF385B
CDH11
PTP4A2
AMOTL2
ARHGAP29
PTMA
B3GNT3
SETD2
ENTPD8
PALLD
POLDIP3
PAQR5
STC2
HSFX4
HUWE1
ABCA3
TMEM107
EPPK1
RASEF
SH3GLB2
PADI3
MTUS1
FUS
SPATA9
RHOBTB3
GLRX5
H3C15
H3C14
H2AC19
H2AC18
ZNFX1
PDCD6IP
CIB2
RAB31
ABCD3
RPEL1
TJP3
MIDN
SIRT4
ANKHD1-EIF4EBP3
ANKHD1
SH3YL1
ACP1
TKTL2
NFE2L1
FECH
ADCY9
NPIPB6
HSP90AB1
KHSRP
CNOT3
DNMBP
KLF10
MICAL3
USP17L15
UNC5B
S100P
RBBP5
USP17L11
USP17L21
USP17L12
BATF
PAX4
PKIB
CYB561
LENG1
ADD3
GPR153
ANAPC7
NUP85
GJD3
TTC21B
TM7SF2
H2BC5
H1-4
INAVA
LHX4
ESRP2
SLC16A3
TNK2
SASH3
USP17L18
KLRC3
EXOSC5
BCKDHA
SRSF7
TCF21
CACNA1H
H4C14
MAB21L4
TRAF7
RPS29
GPD1L
MOCS1
MEIS1
LAMB2
CSK
SH3BGR
LCA5L
SLC19A1
ACBD6
GTF2B
AZGP1
ANGEL1
ENKUR
DYSF
SLC25A25
NAIF1
ZBTB5
SMAD3
UBE2I
KCNK7
SART3
ISCU
C19orf48
ATP5MG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB5B
HRK
UFM1
TRIM2
IMPA2
B2M
PRSS8
PNO1
SF3B3
COG4
FBN1
ZNF91
AHCYL1
IRF2BPL
UBE2L3
MYH11
HSH2D
GAA
PHF13
AKT1
ZNF576
IRGQ
GOSR2
TOMM40
PSMD12
MRPS7
GGA3
SH2D3C
DDIT4
DCLK1
ZFP37
H4C3
H1-6
ZNF654
CGGBP1
TSN
PCNX3
MAP3K11
SBSPON
SLC11A2
ITGB3
H4C11
SEMA4G
H4C12
C1orf198
PCTP
NVL
DLL3
CASZ1
BLCAP
ZNF335
ZRANB2
GHRH
EEF1A1
PPP2R3A
IVD
SULT1A1
EIF3E
RPS27
RAB13
KCTD1
ID1
SP1
SUN5
RP1
BPIFB2
PROP1
CGN
KRT36
KRT24
C20orf204
NR0B2
GADD45B
IL17RB
CHDH
APPL2
SLC7A2
SLC27A2
RABL2B
FBXO34
CACTIN
NCOA7
STAM
H4C15
HOGA1
GAGE2A
TANGO6
LARP1
H2AX
SCD
SULT1A4
SULT1A3
BOLA2
TOB1
TRAF2
SKP1
NME6
FAM187A
EFTUD2
CCDC103
MBD6
FGF18
DDIT3
C4orf19
TLE3
WDR97
MAF1
NDRG2
ARHGEF40
PPP1R10
MRPS18B
PKM
PHACTR2
SRSF2
MFSD11
AHCY
H2BC12
H2AC12
NUDT4B
NUDT4
NUP214
MED12L
SHANK1
CLEC11A
HP1BP3
RUNDC3B
FIBCD1
ARRB1
PLGRKT
SCAMP4
ADAT3
PDHX
APIP
SEC14L5
RPLP1
H2BC21
H2AC21
H2AC20
WNT4
HSPA9
EIF1
PROSER1
NHLRC3
ZBTB4
SLC35G6
SEC14L2
POLR2A
BTG1
UQCRH
LRRC41
UPF2
JUND
ARRDC2
CLPSL1
LOXL4
RAD23A
RAB11B
PTPRH
MT2A
RABL2A
SESN1
SBSN
GAPDHS
MACIR
GAGE2B
TBC1D10B
MYLPF
FAM78B
FAM3C
SEC61B
RPS20
P2RX2
ADAMTS8
SEMA3F
EMP2
RPL27
BASP1
NOTCH2NLC
NOTCH2
CALM2
SRD5A1
RPS2
RNF151
NSUN2
MACROH2A1
CEBPD
VIT
OVOL1
AP3M1
ADK
CDH1
ASXL1
ACE
GEMIN4
COL18A1
UPK3A
TMEM17
TMEM238
RPL28
RORC
HADHB
HADHA
SOCS3
CYP3A43
RPLP0
PTPRN2
P2RX7
LRIG2
PLXNB2
JUN
GSTA4
JAKMIP1
IPO13
SLC46A3
SLC35B1
MN1
BOLA2-SMG1P6
PHF3
NUDT9
TRIP10
GPR108
BCKDK
WNT7B
ERG
EEF2
TIAF1
SYNGR1
ASGR2
LETM1
IQGAP2
EOMES
BCAT1
ZC3H10
RPL41
POLR2J3
OR2T1
STAM2
JUNB
H2BC11
H2AC11
FILIP1L
LASP1
GFOD1
SIMC1
REXO1
STIP1
S100A10
NFKBIL1
DDX39B
ATP6V1G2
WIZ
PSMB3
PCGF2
KLHL14
CSRNP1
BCAR3
MAT2A
TBCK
POFUT1
PLAGL2
MVB12B
AIMP1
CCR7
CCNO
TTC8
TRIM45
TMEM120A
FAM53C
CDC25C
MLPH
TRIM16L
OXCT2
MS4A6E
OPRD1
TSPOAP1
PRKACA
BFSP1
SMC2
HEXIM1
DTNB
POLR3E
NME1
NDUFS7
TOR1AIP2
ID2
ZCWPW1
TCF7L2
MEPCE
LPIN1
ZC2HC1C
ACYP1
LUC7L2
FMC1-LUC7L2
FMC1
DENND1B
DDB2
RNF149
PPFIBP2
CAPN13
PSMD1
MIPOL1
ZNF823
TJP1
H1-7
PKD2L2
USP53
TMEM60
PHTF2
GPAM
VDAC2
RCC1
SH2D4B
AK2
EIF4G2
ATXN7
IER3
FLOT1
H2BC8
H2AC8
DDX5
CEP95
CHST11
MAGOH
COX5A
SUPV3L1
STRIP1
RBM17
PLEC
IMPDH2
GPR137
GNA12
TUBB4B
TP53I11
PIP5K1B
MEI4
FBXO31
PUM2
NR2C1
DCLK2
CEP295NL
ADPGK
SLC2A11
HNRNPH1
RAB7A
KCNB2
DICER1
EIF4A1
LYRM4
H4C2
H3C2
FRAT2
FARS2
RPS6
EIF4E3
NAT10
CIRBP
ARMH4
METTL16
RPS12
PLAGL1
JAK1
TRIM55
NFE2L2
STK40
PMAIP1
ALDH3B2
NEMP2
SNX16
KLF9
PPIF
NUDT3
DNAJB5
FAM199X
RANBP2
FAM151B
SYT15
ESYT2