ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5090184 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◣ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L1
WDR74
DUX4
MYH11
DLL3
FRG2C
SPAAR
FBN1
TMEM210
LRRC26
MUC3A
KCTD1
FRG2
TUBA1A
TRIM2
CEBPD
MTRNR2L9
TMEM17
JAKMIP1
BCAT1
FGF18
EPN1
CCDC200
TMEM107
NR2C1
CEP295NL
EOMES
SNX16
HRK
C20orf204
ACE
SRSF7
EGR2
GJD3
RASSF5
FAM78B
TMEM130
MAD2L2
DRAXIN
JPT1
PTK7
ATOH8
EIF4A3
FUS
ARHGAP45
MICAL3
TACR1
SLITRK3
ALKAL2
RPS2
RNF151
MISP3
RGPD2
RGPD1
RPS6KA4
BFSP1
KSR2
SIRT4
TRAF7
NPPC
ZBTB4
SLC35G6
POLR2A
CASZ1
TCF7L2
ARSI
DYSF
ITGB3
PMF1-BGLAP
PMF1
FAM43B
RAB20
ARMH4
MAPKAPK5
MAPT
FAM110D
RPLP0
SLC24A4
ACOT6
MYLIP
ANKDD1A
WNT5A
OXCT2
SYNM
MRPS26
GNRH2
ARHGAP44
HEXIM1
DHH
PAX4
SLC27A2
H4C14
RBM20
FLT3
THEM6
RUBCNL
RIPK1
CHST11
SLC20A1
ZMYND10
RASSF1
MACIR
TRADD
HSF4
FBXL8
CSKMT
C11orf98
EEF2
POLR3F
DZANK1
ERICH5
IMPDH2
XXYLT1
HOXB2
EPCAM
SV2C
PDGFRA
NRCAM
FSCN1
ADARB1
POLDIP3
GRAMD1B
ACOT4
SPATA9
RHOBTB3
GALR3
TSN
OPRD1
SYT17
BTG1
KCNB2
EFCC1
CFAP92
SOCS3
SCD5
DOCK8
CIRBP
C1orf21
RPLP1
EIF4E3
PIK3CD
SRSF12
GPR27
FAM151B
MAP1B
RPS9
RPL3
NEURL1B
DOCK10
RPS12
NWD2
GTF2A1
CACTIN
PDE4A
STOX1
TUBGCP5
SLC16A14
OLFML2B
H4C12
MAT2A
FJX1
NEUROD2
TEX45
GALNT18
SLC25A27
INTS6
CYP39A1
TSPAN5
RPS27
RAB13
UBE2M
DDAH1
CALM1
BHLHE41
TMOD2
TFRC
RORB
LYSMD2
AMZ1
EMILIN2
SPINT1
H2AX
SLC9A1
CEBPB
TBXT
SUSD5
MEIS1
ST8SIA5
PTPRG
PTH2
PCDHGC3
NPW
GFY
GADD45B
BCAR3
PIP5K1B
KCTD12
LHX4
IQGAP2
UBE2S
MEF2C
KCNMA1
SVIL
NOTCH2NLC
NOTCH2
FGFR1
RTN2
PPM1N
SLCO4A1
MRC2
ICA1
HHAT
GAD1
GFOD1
TEX15
PRSS56
CHRND
HACD1
MATK
EDARADD
CD24
ABTB2
MBD6
DDIT3
TUBA1C
UBC
LCMT2
EEF1AKMT2
DZIP1
ADAL
HNRNPA2B1
CBX3
ARRDC2
IL15RA
HELT
DDX3X
NBPF1
HSP90AB1
RPL38
CALHM6
PSMA7
H4-16
H2AJ
FRMD6
HSP90AA1
MPPE1
CD74
REXO1
EIF4A1
SRSF3
GAS1
H1-2
ERO1B
ACOT1
H3C15
H3C14
H2AC19
H2AC18
KANK1
DGKH
NXF1
UNC5C
P2RY1
LRP11
FARSA
CCL28
CALR
HNRNPH1
RPS4X
SFRP5
H3-3B
PFKFB3
MMP28
KLHL35
CDCA7L
ACOT2
PRDX1
RPS20
PROS1
JAK1
PDGFD
RASL10A
NRARP
INSM1
FAM43A
RPS6
TFCP2L1
SRSF6
ARX
ZBTB37
GTF2B
CHN1
THOC3
SPTAN1
PDE4C
RASGRF1
JUNB
H2BC4
H2AC6
TMEM51
RPS26
SPATC1L
UBB
SHISA3
LRRFIP1
SKP1
RASD1
PTPN5
EIF4A2
ZCWPW1
MEPCE
SEMA6A
PHLDA3
KCTD15
KCNA6
HMGA1
LTBP1
RPS3
NTRK2
FOSL2
BIN1
AMOTL2
NME6
EIF1
DNAJB4
HFM1
GOLGA5
DAB1
H4C11
DUSP1
PLPP3
KISS1R
GCNT4
DGAT1
TMEM229B
PLEKHH1
H4C15
GLS
SNORC
B2M
QDPR
DIPK1C
CLRN2
RABL2B
RIMBP3C
RIMBP3B
KDM4A
H2BC5
H1-4
H2BC8
H2AC8
NAAA
KIAA1549L
GLB1L3
ZNF720
DNAJC25-GNG10
DNAJC25
CYP24A1
CLASP2
CBR3
RIOX1
ATF4
ADRB2
TMEM259
CNN2
SIX1
ARHGAP42
RGS6
TRMO
GEMIN4
ZNF277
DOCK4
PHACTR2
SMTNL2
CAMK2N2
ZC3H10
RPL41
RPL7A
MED22
KLF1
DNASE2
C19orf48
H2BC21
H2AC21
H2AC20
PTPN6
C12orf57
SLC30A3
LAP3
H1-10
DLX1
APTX
LBH
TMSB4X
DNAJA1
EIF4G2
GNB4
CFAP73
SIX5
SIX4
CSRNP2
POLR3D
GJA3
FZD2
FGFBP3
ENDOD1
FAM53C
CDC25C
TMSB10
RNF207
RNF125
WNT11
H4C3
H1-6
TNFRSF1B
MT3
MIIP
CCNL1
PAH
OAF
ELOVL7
ASCL1
PPP1R10
MRPS18B
CALM2
SLC3A2
INPP1
CYP26A1
B3GAT2
SH3RF3
POR
LSR
HOXA7
HOXA3
SFRP4
PLXND1
HLA-DQA1
EPDR1
C6orf62
POLR2J
IER5
VAMP1
TPCN1
IQCD
GPX1
ATP6V1FNB
CBWD5
LDHA
ZNF853
NSMCE4A
KIAA1614
GPR157
TPBGL
FTL
AADAT
HEXB
RPL13A
PRRG4
RPL32
ENOX1
BBC3
SLC43A1
LENG9
BMP2
HIBADH
RPS27L
GDF1
CERS1
ZC3HAV1L
ADRB3
TMEM238
RPL28
SLC27A3
NXPH3
IRF8
SPSB4
HR
IER5L
CLIC6
SRSF5
RHOB
H4C2
H3C2
RELT
CLTA
GREB1
CASP7
PDZK1
RARA
MYOG
FKBP4
PARD6B
ADAMTSL5
VASN
FREM2
KCNK6
RNF223
RPS6KL1
LMAN1L
DGKZ
RAPGEFL1
N4BP3
OVOL2
TPD52L1
TFF1
TH
SGK3
SYT12
C1QTNF1
CYP1B1
HAAO
FOXK1
CHPT1
SNX24
CCDC88C
CAP2
SFXN2
ARL3
TIPARP
CTBP1
SLC25A24
MCF2L
AKAP1
C19orf33
KDM4B
MAP3K14
MANEAL
PTPA
CRAT
NFKBIA
NAB2
B3GNT6
EDF1
CTAG2
LY6E
ARMCX6
HAPLN2
C1QTNF6
USP31
PDGFA
ZNF185
ITPK1
CXXC5
MYB
MSMB
GPRIN1
FAM102A
STK11
APOA1
UPF1
PDE4DIP
LRRFIP2
ESR1
CABLES2
LAMC1
CLIC3
CELSR2
MIDEAS
SLC25A45
SPTBN4
BLVRB
DOK7
TTC39A
RGS10
KEAP1
TFAP2C
LYPD6B
AFF1
SCOC
VPS26C
OLFML3
IPPK
KRT85
CRKL
FBP1
UMODL1
CST6
TMEM92
CCN5
PLIN5
LRG1
RAB40C
DMRT2
TBX2
LRRC56
HRAS
SEPTIN9
KIF21A
ADAM8
UNKL
KIAA0319
SPOP
DECR1
TIFA
CUEDC1
PAK4
PKP3
FST
SLC25A36
SLC25A42
CBWD3
CHSY1
UHRF1
C1orf162
FMN1
VWA2
ELF1
CBWD6
CCR6
ARHGEF18
ABAT
FOXK2
MAD1L1
ABCC11
SPATS2L
ACSS1
TJAP1
GRIK3
DHX37
BRI3BP
SBNO2
MICOS10-NBL1
MICOS10
EHF
SLC25A47
TTC6
FOXA1
MACC1
ZFP36
PLEKHG2
DNPEP
SNAI1
GRM4
COLEC12
SLC9A3R2
ADGRG1
B4GALT1
UGT2B15
LRP5L
TRH
TCIRG1
RECQL4
LRRC14
PSD4
SERPINA1
ANXA9
RCOR3
LATS1
CDK3
KAT6B
ACACB
BMP7
RPS28
NDUFA7
FUT4
C16orf74
SGCA
MFSD10
TPD52L2
ABHD16B
NPEPPS
YPEL2
RERG
ASB2
AGR3
TMED8
SAMD15
SYNE3
HDAC11
COL23A1
MRGPRG
ANKRD2
ACIN1
MAMDC2
GPSM1
CBFA2T3
IKBKG
ELAPOR1
C1orf194
SULT2B1
SLC26A1
IDUA
DSN1
PTGES
ZBTB46
RGL3
ATP6AP2
TSKU
VCAN
EFHD2
SYT8
IL2RB
GPC6
GFAP
SP2
SLC22A5
MGAT3
SEMA3B
VEPH1
ZNF346
EDN1
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
DHRS3
B3GALNT1
NT5DC3
PPP2R2C
MUC1
TP53I3
SERPINA6
PNKD
FAM214A
SVEP1
NRP1
IL24
LIMS1
TBKBP1
PRUNE1
MINDY1
CFAP206
UBALD1
PERP
NXNL2
SLC25A19
ARID5B
HSPB8
LRRC58
NPIPB9
ZBTB45
CDC34
PRSS27
LOC102723996
ICOSLG
PXDC1
CASTOR1
MAT1A
TFAP2A
G6PD
PLXNB1
AKNA
TUBA3D
NDRG1
CYP4F2
WNT16
SCGB3A1
MAGI3
REM2
LONRF2
TUBA3E
COX7A2L
PGLYRP2
MCRIP2
GZF1
C20orf203
ZFYVE28
NEFH
CFAP99
DNMT3A
EIF5AL1
TST
MPST
SHANK2
MTRNR2L10
LFNG
SLC1A5
SCARB1
TTC39C
CDC42EP1
DOT1L
ADORA1
USP17L20
RNF144A
TAX1BP1
TMEM95
KCTD11
DNM2
PCYT1A
STMN3
RTEL1
CYP4F11
MYLK2
TMEM212
NR2F2
ARHGEF16
HK1
USP17L22
GRAMD1A
IL20
UNC45B
LEMD2
ROBO3
ERN1
LIMS4
TXNRD1
FBXW8
PTH1R
HSPA4
RPS6KA2
CDR2L
SPRY4
USF2
TRIM48
RFX1
ELFN2
TDRD9
FSIP1
OBSL1
INHA
CLCN4
ZNF710
TSEN54
CASKIN2
INS-IGF2
INS
AP1B1
SLC45A4
DDX10
NLK
CLDN2
RHOD
SLC37A3
AMBP
DHRS2
HNRNPL
ATXN1
FGFBP2
TNS1
BAMBI
RNF170
HOOK3
JPH2
DMPK
ELOVL2
RNPEPL1
OSBP
ANKMY1
CRYAA2
CRYAA
DLG4
FOXN1
FRMD5
RCAN1
C3
CDH18
EXT2
TBXA2R
CALML5
CSF3
PI4KB
MARCHF10
RHOBTB1
ACADVL
EVI5L
RALGPS2
MTRNR2L6
NR2F6
SDC1
SLC29A1
ZBTB7A
FABP3
BCL3
ABCB8
UBL4A
SLC10A3
NBPF15
OAZ3
PABPC1
RGS3
CALHM4
ME3
DLC1
ZMYND11
APOC3
NAIP
UBE2H
SNX10
KRT13
FADD
OXT
TOM1L2
HSPB1
DRC3
MTA1
SLC6A6
NBPF12
HOMER2
EHD1
ANXA2
PRSS22
ITPRIPL1
ARFGEF2
FNIP2
KLRF2
CIC
NTMT1
PDLIM2
GATAD2A
PMEPA1
ITGB2
RBM43
VWA1
SSTR2
PLCD3
ACBD4
ZNF687
TWF2
FOXO6
C9orf50
ZNF552
MEF2A
PPP2R5E
PABPN1
PRDM4
ASPG
FAM234B
JARID2
LGR6
SHCBP1L
FARSB
C9orf139
ABCA2
SLC37A1
TRPM7
ARHGEF10L
ZBTB7B
RABL6
OPRL1
LKAAEAR1
ZNF746
BHLHE40
RAI14
PCIF1
FBH1
ANKRD16
PAX9
EOLA1
HSFX3
TPBG
KAZN
ZSWIM6
CRK
ZNF385B
CDH11
PTP4A2
ARHGAP29
PTMA
B3GNT3
SETD2
ENTPD8
PALLD
PAQR5
STC2
HSFX4
HUWE1
ABCA3
EPPK1
RASEF
SH3GLB2
PADI3
MTUS1
GLRX5
ZNFX1
PDCD6IP
CIB2
RAB31
ABCD3
RPEL1
TJP3
MIDN
ANKHD1-EIF4EBP3
ANKHD1
SH3YL1
ACP1
TKTL2
NFE2L1
FECH
ADCY9
NPIPB6
KHSRP
CNOT3
DNMBP
KLF10
USP17L15
UNC5B
S100P
RBBP5
USP17L11
USP17L21
USP17L12
BATF
PKIB
CYB561
LENG1