ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX23330420 | MDA-MB-231
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◣ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

FRG2C
SPATC1L
SP2
DNM2
LEMD2
HNRNPL
OSBP
NLK
PABPN1
DUX4
RFX1
EVI5L
GATAD2A
FRG2
ZFP37
ZNF687
FBH1
ANKRD16
RABL6
CRK
CIC
TOM1L2
DRC3
LRIG2
BCKDK
PCIF1
MTRNR2L2
MSH3
DHFR
NDRG2
ARHGEF40
WIZ
TRIM45
UNC5B
TOMM40
PRKACA
MUC1
UBE2L3
NUDT4B
NUDT4
H1-7
GPAM
SH2D4B
ZNF654
CGGBP1
ADPGK
ANKHD1-EIF4EBP3
ANKHD1
SLC2A11
SLC25A42
NUDT3
DNAJB5
KHSRP
WDR97
MAF1
SLC25A25
NAIF1
TMEM150A
KDM4B
TANGO6
SEC63
FANK1
GAGE2B
GAGE7
GAGE5
GAGE4
GAGE12I
AXL
SRPRB
RASA4B
CRTAP
RAB11B
COL23A1
CIAO3
NOTCH2NLC
NOTCH2
NBPF1
TCF3
TRIP10
GPR108
SIMC1
OGDH
TTC5
PACSIN2
TRAF2
ZMYM2
MAGI3
PIN4
COLEC11
ARHGEF35
MRTFA
MIOS
SNX12
PSPC1
RNASE10
KANSL1
ARHGEF5
ZC3H6
NOTCH2NLB
NOTCH2NLA
TMEM60
PHTF2
KMT2A
AMDHD1
PPP2R5A
BRAF
SAMD11
NXT1
MYH10
HOOK1
PRELID3B
NOP14
HLA-F
GRK4
UBE2E2
TTC21B
UGT1A3
MIER2
ANKRD54
MFAP3L
STK11
RBM26
KAT6B
TPMT
KDM1B
PDE4DIP
FAM199X
TULP4
JPT2
LRRC74A
HDGF
UQCRH
LRRC41
POLR2J
ZFYVE21
XRCC3
SMYD2
H2AZ2
FARP2
BLOC1S4
ARHGAP19
CCDC200
TMSB15A
XPNPEP1
CHD1L
ABCB10
PCSK6
ANGEL1
AK2
STRIP1
CBR3
GALNT11
TCEAL2
HDGFL2
KIAA0319
UBE2R2
TLN1
SLC40A1
SLC35D1
JOSD1
GTPBP1
GLUD2
DNAH14
CREB3
PLAG1
CHCHD7
TM2D3
PRKAA2
ETV3
DCUN1D4
BHLHB9
LPIN1
WTAP
USP33
SOD2
PLPPR5
CRELD1
GTF2A1L
CHGB
CCZ1B
ANKRD39
C16orf74
JAK1
TBC1D5
EPB41
C22orf39
KCNS3
USP17L20
USP17L11
USP17L21
USP17L12
USP17L18
EIF1
RC3H1
PUM1
LYPLA1
PPP2R3A
APPL2
SPIDR
SMIM10L2B
NR2C2
TMCC3
PDXDC1
NFATC2IP
CLVS2
C1QBP
TBC1D10B
MYLPF
PHF3
OPRD1
FBXO31
PCDH9
MUC12
MAP1LC3B
GCLM
GAGE6
GAGE12G
GAGE12F
GAGE12E
GAGE12D
GAGE12C
GAGE12B
ARHGAP39
ARHGAP29
SBF2
DPY19L4
AKAP1
YWHAH
TRIM39-RPP21
TRIM39
H2AB3
H2AB2
H2AB1
FTH1
F8A3
F8A2
F8A1
F8
CDC25A
CCDC160
ATL2
RBM17
ZZZ3
ZNF329
ZNF326
VPS37B
VGLL3
TSKS
RFX6
PI4K2A
LPAR3
AP2A1
AKAP14
RAB40C
PLXNB2
POLR2J3
TMX2
MED19
CNNM3
POFUT1
PLAGL2
ZNF584
UBN2
TXLNA
TARS3
SMAD2
RASGRF2
LRRC8B
HDDC2
BEX1
AGK
SERPINB6
PARD3B
LRRC8A
KYAT1
CTTNBP2
COQ7
SULT1A1
PIP5K1B
PDGFD
HFM1
G3BP1
RDH16
MACO1
LHPP
KCTD18
DNAH9
ID2
DENND1B
WNT2B
HYAL1
FAM76A
ATRIP
HDAC4
TCTEX1D1
IFITM2
IFITM1
HTATSF1
DEK
CANX
ADA
ZCCHC3
UAP1
TFPI
SAP30L
RCC1L
C1QTNF12
TMTC1
SUV39H2
SMOX
IFITM3
DSE
ARAP3
TP53INP2
NFE2L1
LRCH4
FBXO24
ZNF275
RGS2
MTHFD1L
AKR1B1
ARFGEF2
DTNB
VHL
TMEM164
RRAGD
PIN1
MIER1
MAP7D3
KMT5B
GPR180
ELL
CPSF6
CPLX2
AUH
H3C15
H3C14
H2AC19
H2AC18
SDCCAG8
LEPR
CTNNBL1
CEP170
RGS6
SMARCD3
SLIT3
SIPA1L1
PRR5-ARHGAP8
PRR5
MRAS
MAP2K4
KCNA3
INO80D
FCHO2
CITED1
BEX2
ABCA5
VARS1
RALGAPA1
DAPK3
CNOT6
ADAM19
ST6GALNAC3
PKIB
FGF18
FAF1
TRIM24
STON2
SMURF1
SAMD5
PSEN2
PDE4B
MED26
GNG12
DPYD
DENND11
CFAP300
CCS
CCDC87
ADCK2
ZSWIM4
STRBP
POGLUT3
MAP7
CPOX
CDH24
B3GALNT2
RAB5B
YBX3
TSPAN10
TRMT44
TPK1
TMEM61
RTP3
RBX1
OR6J1
NPLOC4
MAST2
MAPK8IP3
LGR5
FAM168B
CSNK1E
ANXA5
ACOX3
NCOA7
METTL16
ARIH2
TMEM202
SPAG8
RGS7
PLEKHA1
NFIA
HINT2
GORASP2
FBXO5
DEGS1
C16orf72
AP3M2
ADAMTSL3
VAMP4
TXNDC5
SEPHS2
RGPD4
LRRC37A3
FHL1
ETNK1
DGCR8
SYNC
RABGEF1
LGR4
GDI1
FYN
FBXO30
FAM20B
FILIP1L
UNC5A
SLC35F4
SF1
PROK2
PDCD2
METAP1D
MAP10
LAPTM4B
GGA2
DHX30
CTNNAL1
CSRP2
CACHD1
ELK4
ZFAND2A
LRIG1
CT47A7
CT47A6
SLC6A6
GAGE2A
TIAM1
STK10
SMARCC1
SLC44A5
PRKACB
PRAMEF33
PRAMEF10
POLD2
PALM2AKAP2
MOV10
LYRM9
LOC150051
GRK6
DIAPH2
CYLD
CHRDL1
CDKL1
CALHM6
VCP
TPST2
OSTF1
ODC1
NMRK1
MCOLN3
DOCK7
CD276
KCNB2
ZSWIM7
TTC19
TARBP1
RBM15B
RAPH1
PEX7
PARP6
GRHL3
FAR1
F3
CT47A9
CT47A8
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
C2orf69
C15orf61
ANKZF1
RALGPS2
JARID2
KCTD1
EIF4E3
UBE2S
NOCT
ZNF860
TEX10
SLC12A9
SHD
PRIMA1
OSBPL10
LRP12
KCTD13
EPHB4
CTBS
PARD6B
TRAP1
TFDP2
SNX7
PRR16
NDST3
MAP3K21
LAMA5
ELF4
VPS4A
TEAD3
SULT1A2
ST3GAL3
SPRY1
SNRK
SLC9A8
RNF19B
RCN2
LMO4
FAM89A
FADS3
DACT1
CHST3
ADAM15
TMEM229B
PLEKHH1
MAPKAPK5
SESN1
FGFR1
TOM1
TMEM158
TMED2
SRRD
RAB11FIP2
PEX10
NREP
MPP6
MBNL3
IMMP2L
HPS4
EPHB6
CYREN
BMP2K
ADIPOR1
GLRX5
SERPINB9
PGBD5
FKBP5
EIF2AK3
DENND2D
BARHL2
SETD2
XPO5
UBTD2
STK17A
STAC
RMDN2
RIC1
POLH
KRCC1
CTF1
C2
BCL7C
HK1
GPD1L
ATXN7
MFSD14A
TLE4
SLIT2
RAB8A
PPM1H
LIG3
LHFPL2
ELL2
DENND6A
CCSAP
C7orf50
ASB1
TNFSF13
TMEM185A
TLCD5
SENP3
RNF135
RAB24
PRELID1
MKRN1
LMBR1
FAM8A1
CLTB
ARHGEF11
ACBD6
XPO4
STRN
SERINC2
ROBO2
RAB4A
PCGF5
NXF3
MAPK1
MAFF
CYTH2
CTNNB1
ANO10
ABHD5
SH3BGR
LCA5L
DIP2B
TICAM2
ZNF566
ZNF558
ZNF32
ZNF281
TRIM11
TPRG1L
TNIP2
SLC36A4
RHEB
PTPN20
PRDM11
MS4A1
MID2
LY75-CD302
LY75
KIF27
GLIPR2
ERAP1
ENDOV
CREG1
CEP350
ARHGEF12
APCDD1L
SYT15
DUSP1
ACTR1B
TBC1D10C
RNF166
PRR7
PPP1CA
LOC102724488
DAG1
CTU2
NT5DC3
TMEM79
SMG5
DYNC2I1
ZNF318
URB2
UBA3
TBC1D4
TAF5L
SLC25A43
RORA
ROR2
PTS
PREX2
NEK7
MYCBP2
KIF5B
HPRT1
HESX1
GLRX3
FAM207A
DCBLD1
C11orf24
BTG3
ARL6IP5
APPL1
LATS1
ERN1
STK40
FAM151B
ZNF652
WSCD2
VPS36
VDAC3
VANGL1
UBE2L6
SULT1B1
SOX21
SMC1B
SFT2D3
RIBC2
PELI2
LHFPL6
GXYLT1
GAREM1
FBXL3
FAM162B
DIDO1
CKAP2
C12orf75
ASTN2
AKAP5
USP17L22
TRAM1
SNRNP25
SEH1L
POLR3K
PHC2
METTL9
MAP11
LRRC8D
GET4
FBXO9
CILK1
ATP6V1C2
TCEAL6
SLC25A15
PXK
PRKG1
PFN4
NKRF
NAA20
MAP4K5
HSPA4L
FAM228B
FAIM
BEX4
ATL1
CDC42EP1
PLAGL1
XRCC2
TAF7L
STARD7
SLITRK5
PRKD3
NPHS2
MFSD6
MANSC4
LPGAT1
LMO2
LCORL
KLHL42
KCTD3
IQSEC3
HHIP
GDF10
CNNM2
CMTM8
ASF1A
ARMCX4
PTP4A2
LETM1
HNRNPAB
TTC9C
SOWAHD
SGPP2
MAP3K2
MAN1A1
HNRNPUL2
HEBP2
GPC5
GOLGA7B
DACT3
CSNK1G2
PRSS23
ZBTB18
ZNF84
URGCP
UBE2D4
SIK2
SERP2
RCE1
MORC4
KIF3A
ITM2B
GAGE12H
CKAP4
CASR
ASNS
USP17L15
CLTA
TBC1D10A
SIPA1L2
RAB3IL1
RAB33A
QSOX1
PIAS2
NUP153
LAD1
KATNAL2
GAN
FNBP1L
ASAP1
ARHGAP36
ACTR3B
RAI14
IL17RB
CHDH
CHN1
SECISBP2
MKRN2OS
MKRN2
WDR45B
THSD7A
SLC45A3
SLAIN1
RAMP2
PLPP5
PHIP
OSTM1
MCUR1
MAP3K1
HLCS
ENGASE
CLIP4
CEP112
BOC
KHDRBS1
TMEM71
SLC2A1
PRKCZ
PHF20L1
OR10AC1
NEURL3
KLHL7
IBA57
CMTM7
CAMSAP2
C2CD4A
ARL2BP
DHX37
BRI3BP
TMEM171
SKIDA1
PRKD1
OMP
MAP3K9
LBR
HIP1
DTX4
COQ2
BEND4
BAALC
SEPTIN9
PNKD
KAZN
SP1
TJP1
FRMD6
UBFD1
EARS2
YWHAB
WDFY2
VWA8
VGLL4
TMEM170A
SYT14
SMAD1
SIRT5
RNF180
RAD54L2
PGRMC1
MORC2
MMP2
MATN3
KLHL22
KIF23
IQSEC1
GKAP1
EGLN1
DUSP23
DDHD2
CD59
ZSWIM5
TWF1
TMEM117
SLC27A4
RP9
PKD2
PACS2
MTRR
MBTPS1
LPAR1
KCTD7
GABRE
FASTKD3
CCN2
BRWD1
BRF1
SLC25A24
TWF2
TCF7L2
KCTD12
PATJ
WAPL
UTP4
USP38
TTC21A
TMEM64
SLC4A11
SLC16A6
RMND5B
RMC1
POLR1D
NOMO3
MAPK8
LNX2
KATNB1
HIVEP1
GORASP1
FLOT2
DHRS13
DERPC
CHTF8
CD58
C14orf28
B4GALT6
ARSG
ANKFY1
NEMP2
FJX1
SYNJ2
PPP4C
MAPKAP1
LMO7
IDH2
FIGN
DENND4B
LYPD6B
USP22
TTC36
SSX2IP
SMPDL3A
RB1
RAB32
PDZD2
MSANTD2
HNRNPM
GSTM4
FOXJ3
EVL
EP400
CRLS1
TMED8
SAMD15
ZC3HAV1L
UNC79
TMEM65
THAP4
THAP12
TDRD7
TAB2
SLC2A13
SFXN1
NOMO1
MPC1
MCL1
KLHDC2
HOXD8
GVQW3
EVI5
DNMT3B
DESI2
BTBD7
ATG4B
ACTB
ELFN2
TOB1
YTHDF2
SVBP
SPSB1
RTN4
REEP1
PTP4A1
PDZRN3
NOS1AP
NID1
KMT2C
GIPC2
FMNL3
ERMAP
DTNA
CEP68
CADM2
ADARB1
UBE2H
DISC1
YWHAQ