ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475368 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◢ SRX10475367: Hep G2

◣ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
INSM2
FRG2C
IQSEC3
MTRNR2L1
LIN28A
DUX4
MTRNR2L2
MSH3
DHFR
FAM24A
NKX1-1
CELSR3
HTR5A
KCNH7
LOC102724770
DGCR6
FRG2
L1CAM
GLRA1
RAB37
MTRNR2L8
ZC3H18
RANBP3
TMEM242
CHGB
EPHA10
CPLX2
SMIM17
SNAP25
BARHL1
AFAP1
LEMD3
DLGAP3
SLC7A6OS
PRMT7
EAPP
RTBDN
MAST1
KDM3A
PIK3R3
CNOT3
GDAP1L1
ZNF23
MAPK8IP2
RGS19
OPRL1
LKAAEAR1
KATNA1
ODC1
KCNK12
SLC39A3
HDAC2
GCFC2
SAYSD1
CCDC200
TRIM44
SLC12A5
NOC3L
E2F6
RFC1
CADM3
AATF
BPIFA3
RNF130
MAMDC2
CTDSPL
COL23A1
SNRPB2
H4C12
H4C11
H2BC15
H2AC15
MMP24
SST
CDIP1
SIGLEC10
DEFB132
STK25
PTPRS
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MYT1
MTHFD2
EVI5
VRK2
N6AMT1
UNC80
ICMT
HES3
AIP
HBQ1
HBA2
HBA1
RNASEH2C
KAT5
CHRM4
SPOP
MED31
C17orf100
LHFPL5
CLPS
TMEM129
TACC3
SLBP
DHDDS
WDR36
CCDC92B
RBM28
CDK5RAP3
PMVK
NDUFS3
KBTBD4
FAM180B
FAM118A
ABCA3
CEMIP
KLF11
IPMK
CISD1
PPFIA3
C19orf73
DIABLO
ANK1
MSL2
FAM227B
DTWD1
SCGN
NME6
CEP295
MTF2
RIPPLY2
CYB5R4
STAT3
PPP2R2C
TMEM106B
ITPRID2
LARP1
TBC1D13
CPQ
ANKRD36
RNF103-CHMP3
RMND5A
LINGO1
HMGA1
MLN
HECTD1
TK2
CKLF-CMTM1
CKLF
VSIG2
ESAM
MLH3
UTP11
FHL3
NDUFAF5
ESF1
DHRS4L2
LRIF1
MARCHF4
TCFL5
ANKRD36C
TRIP4
PCLAF
LACC1
CCDC122
FMNL3
UTS2R
MRPL44
TUBA1B
VWC2L
SLC25A21
VPS29
RAD9B
TOMM34
STK4
CCDC83
PNPT1
STMN3
RTEL1
LTV1
XRN2
MLXIP
THUMPD2
HEXD
TMEM230
PCNA
CDS2
AP3B2
VGF
ZFYVE27
EFCAB13
USP40
LCLAT1
DLL3
USP14
TIGD1
EIF4E2
UNK
H3-3B
RAP1GAP
PRRT2
PAGR1
MAZ
CERS6
NSUN5
PIGF
CRIPT
MRPL3
HINFP
MED23
GPR158
FAT4
ENPP3
UBE2Q1
CHRNB2
TBCB
RNASEH1
POLR2I
OVOL3
HES6
STX16
H2BC14
H2AC14
AP3S1
TASOR
SCFD1
HEATR5A
TSEN54
LLGL2
CASKIN2
PEDS1-UBE2V1
PEDS1
FANCL
SNRPB
RBM12
CPNE1
PLEKHM3
ANKRD36B
CNTRL
C5
HHATL
TRMT11
OR2T1
PHF3
NDUFAF1
NPPB
NTSR2
LPIN1
MRPL39
TBC1D19
SNTG1
NBEAL1
TM9SF1
IPO4
SRSF6
MRPL19
RPS6
TPP1
TAF10
RRP8
PDE6D
ILK
COPS7B
OGDHL
MIA2
RPL37A
RRP1B
HSF2BP
CC2D1A
C19orf57
METTL15
KIF18A
RPL31
TUBGCP3
PALB2
DCTN5
SLC25A10
MRPL12
DHX40
USP37
CNOT9
LAMTOR5
SEC23A
HDAC4
CNPY3
HPCA
CRYAA2
CRYAA
RBL1
SRP19
GEMIN2
PDE7A
PSMA1
PDE3B
POLR2J3
EPM2A
DTD2
MEIG1
DCLRE1C
ZNF780B
MPHOSPH6
MFF
C15orf61
ZNF843
ZC3H8
TTI1
RPRD1B
RAD50
SMAD2
FAF1
CDKN2C
PGRMC2
TAF12
RANBP2
NBPF1
PMS2
AIMP2
ZCCHC7
STAT1
ZSWIM1
SPATA25
NEURL2
CTSA
ZC3H15
CPPED1
COA1
DDX1
USP30
SVOP
ATP5F1E
POLR3E
KIF27
PTDSS1
MTERF3
MARCHF7
ZNFX1
NADK2
DPY19L4
TMEM186
PMM2
C5orf51
EBAG9
WASHC4
CRH
DHRS4L1
LMCD1
PIK3IP1
PRKDC
MCM4
EIPR1
ISM1
DCP1B
GRM1
MRPL17
LOC112694756
C14orf93
ZFR
SLC36A4
ACSF3
POLE4
FAM98B
KAAG1
DCDC2
DGAT2
SLC39A1
CRTC2
CREB3L4
SCLT1
RIOK2
PCF11
C4orf33
THUMPD3
NAT10
CFDP1
SHOX2
HBS1L
ASNSD1
ASDURF
AHR
C7orf25
FAAP20
H1-2
MRPL21
IGHMBP2
TPR
ODR4
NAV2
CALM2
COCH
WDR89
C10orf88
EIF2S2
CMTR2
FUS
RPIA
MORN2
DHX57
WWP2
NOB1
SPAG4
VPS16
PCED1A
SPAAR
HRCT1
EMC2
H4C15
H4C14
H3C15
H3C14
TMED4
DDX56
RBM7
C11orf71
HEXA
H2AC19
H2AC18
C5orf24
NOMO2
RSPH3
TRDMT1
PROCR
PSMD14
ZNF248
UBE2D3
CISD2
ASS1
SCAPER
PGGT1B
GALK2
H4C2
H3C2
H2AC4
TDRKH
SULT6B1
CEP162
CEBPZOS
XKR9
LACTB2
MXD1
NUP54
BUD13
NXF1
LDHA
NOL7
LRP2BP
ANKRD37
GCA
PDHB
NOTCH2NLA
ZC3H6
NOL10
RAD9A
PPP1CA
DCPS
ZNF280D
METTL3
ASCC1
ANAPC16
GPN1
CCDC121
MSRB3
HIRIP3
FAM187A
EFTUD2
CCDC103
CRBN
FANCD2
FN1
STT3B
COG7
TMEM268
POLG2
PFDN4
DDX5
RBM45
PDE11A
PBX3
MMADHC
TMX3
CCDC102B
DNAJC10
CKAP5
CDC27
DDX18
TBC1D9
ZMYND10
RASSF1
PSME3
BECN1
PRR3
GNL1
TRAPPC6B
PNN
TUSC2
RAE1
MTRNR2L3
LTN1
NR1H3
H2AZ2
ACP2
FBXO8
CEP44
OXA1L
TANK
MTMR2
STK35
MTX2
NCOA3
GDI2
CDCA7
ABCB6
KBTBD3
AASDHPPT
SRSF1
UCP2
NOMO3
HID1
CDR2L
NOMO1
MRM3
GLOD4
TAMM41
ESCO1
RPS27A
CLHC1
TOB1
TTC12
UBA5
ACAD11
IMMP1L
ELP4
PDRG1
LCMT2
CHID1
AP2A2
ADAL
YAE1
UBR2
RILPL1
KCNB1
RPS3A
CCDC90B
DNAJC6
CCNL1
ENOSF1
ZPBP2
IKZF3
SSTR5
SRRM3
PTPRN
FN3K
WTAP
SOD2
GTF3C3
C2orf66
EIF3B
CHGA
GJA10
EXOSC6
CA4
NRSN1
ABCC6
SCRT2
NEUROD1
LTB4R2
LTB4R
CIDEB
LDAH
CDK5R2
WDR74
STX5
TGM1
RABGGTA
SPNS2
PPP1R3C
SP5
PTMA
AKAP10
TENT4A
SF3A3
ACTL6B
AAR2
PGBD5
SLC3A2
UNG
TCAIM
ALKBH2
SLC7A7
PPY
MRPL52
LRRC59
FAM177A1
AARS2
CYP21A2
ZNF286A
TSSK4
GET4
LUC7L
FAM234A
GID8
DIDO1
SIT1
RNF187
NANP
CCDC107
ARHGEF39
NR1D1
TMEM181
SCAMP5
RMND1
DNAJC11
ARMT1
PTP4A2
SCAF11
INTS12
GSTCD
ENO1
C6orf136
SOS1
SMC3
SUGCT
MPLKIP
IFNAR1
PCDH8
MAP2K2
LRP6
NUP62
IL4I1
DCP1A
ATF5
RIPK3
ADCY4
SPTSSA
NAA20
CTF1
BCL7C
THNSL1
MAPK8
EIF4A3
SCGB1D2
PC
NHLRC1
GRM2
C1QL2
CTR9
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
RRP15
PEX3
MUC3A
FGFBP3
BHLHE40
ARL6IP1
ADAT2
NID1
DOCK6
TRIM67
GRIA2
ZNF501
IARS1
QTRT1
NUP160
HS6ST1
CDC16
TOLLIP
RXRA
NREP
ELOVL3
PIKFYVE
NUBP1
GOPC
PDE4C
CABP7
BSPRY
ZNF84
ZFP1
URGCP
UBE2D4
SRP54
NPIPA3
NPIPA2
L2HGDH
DMAC2L
CUL5
AP5S1
SPHK1
SLC9B1
OSBPL8
HELB
GMCL1
CDK5RAP1
AKAP11
TRIM8
MAT2A
MAP2K3
TMEM115
RETSAT
PTPRH
PMS1
PARD6A
ORMDL1
NPRL2
CYB561D2
C16orf86
ACD
ZKSCAN8
MIPOL1
LMLN2
HAAO
G2E3
FTCDNL1
CLVS1
C14orf119
ACIN1
PAX5
KANSL3
FER1L5
CEP126
C12orf66
ANGPTL5
RSRC1
CBWD5
CBWD3
BPHL
ZSCAN9
DBI
C2orf76
ALCAM
MLLT1
LIMS1
ZNF3
TRMT6
RUNDC3A
MRPS35
MCM8
COPS6
PAQR4
MEIS3
KREMEN2
APMAP
AGPS
SLC18A3
PBLD
MEIS1
HNRNPH3
HEATR3
GOLGA8A
CHAT
ZSWIM7
UFSP1
TTC19
TINF2
THAP7
SUGP2
P2RX6
OXSM
NGLY1
MSH5
MRPL35
MRPL16
IMMT
GRM4
GMPR2
DDAH2
CLIC1
ARMC6
ACHE
ROMO1
NFS1
MOB4
CTNNA2
CRNKL1
CFAP61
CDKN2AIPNL
AP3S2
ATR
ACAD9
ZNF219
ZFP90
TMEM253
MRI1
CD274
TTI2
NUDT4
COQ8A
ZNF514
ZNF2
RNF103
POGK
NET1
UBAP2L
SOGA3
C1orf43
NABP1
CCDC57
PIMREG
MYBPHL
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
AIPL1
TMEM18
SIRT6
RAB3GAP2
LOC100287896
LIPT2
KHDRBS1
ASCC3
ANAPC10
ABCE1
PLIN5
LRG1
HPS5
GTF2H1
ELOVL1
CDC20
SYNGAP1
SLC19A1
PSMD7
PHF1
JRKL
ITGB3BP
GMNN
EFCAB7
DHRS2
CUTA
COMMD1
CCT4
CCDC82
C16orf46
WDR43
TTLL4
RABL2B
PAAF1
FBXO33
COA4
VTA1
THOC3
SOWAHC
SHQ1
SEPTIN10
SEC24A
PYGB
NMBR
CEBPZ
SULT4A1
SPATA5
SC5D
RPP38
NUDT6
HNF4G
ESYT3
CTDP1
CCDC116
ACBD7
TAB1
SLC23A3
RETREG2
NDUFAF3
IMPDH2
DALRD3
CNPPD1
ATG7
TOP3B
SLC38A1
HNRNPC
EEF1AKMT1
CCDC59
WASHC1
TTC26
PSMF1
MVD
CTNNB1
CD320
ZNF202
RPL15
NKIRAS1
HSD17B1
COASY
C2orf73
ARPP19
RPL5
PIP4P1
PCNX4
OSGEP
EPB41L4B
DCAF10
APEX1
SERF1B
SERF1A
RNMT
PGP
PCID2
MMAA
MLST8
MIS18BP1
GATAD2A
FAM210A
E4F1
CUL4A
BRICD5
THUMPD1
SLC7A5
RNF146
PRPSAP1
PET117
MRPL27
MARCHF8
LBP
KAT14
EME1
TSG101
STX18
STARD7
NOP2
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
ADSS1
ZNF425
ZNF398
WDR48
UCKL1
SLC25A36
SEC61G
SDCBP
SCN11A
PPP1R11
POLR1H
ID1
GOLGA5
FBXO4
EEF1AKMT2
DDX19B
CWC25
ATXN2L
ABRAXAS2
AARS1
RRN3
RNPEPL1
PPT1
NPM1
MYBL2
KIZ
KIAA1958
DUSP28
DCUN1D5
CHFR
C9orf147
ANKMY1
ANKEF1
WDR41
TOMM5
STIP1
PPME1
NSRP1
NHEJ1
GAS2L3
CPNE4
C2CD3
TTPAL
TRA2B
SLC37A4
PTPRA
PPP4R3B
PLA2G10
NFIX
HSD17B12
EIF4G2
CD302
TMEM223
TMEM179B
TEX14
RAMAC
RAD51C
PHOSPHO2
DHRS4
CHEK1
CCDC173
AHI1
TMEM101
TBC1D15
MOCS2
BMS1
ACAP2