ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
PITX2
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
ID2
LEFTY2
NPM3
FGF8
PRKAB2
CHD1L
CAV1
SNX18
STOX2
COPS8
PLAGL1
SKIL
ZNF148
ID1
LEFTY1
SLC6A15
AGO1
SMAD7
POU5F1
FBRS
MTRNR2L2
MSH3
DHFR
CNOT3
NEURL1B
BMPR2
SPACA6
GAS2L1
STAM2
BCL11A
NPFFR2
MDN1
CEMIP
ALDH7A1
WNT3
EOMES
MRI1
MTRNR2L8
FAM20C
SUPT6H
SDF2
ASIC1
OLFM2
KLF10
SMAD3
MUC3A
CHST11
ZSWIM4
PPP2R2A
FAM178B
POU2F3
ETS1
LARS2
BUD13
SETD1B
NPAS4
ZNF853
ZSWIM7
TTC19
DPPA4
NOCT
SREBF1
RNF32
LRRC37A3
KAT6A
NEDD4L
FOXJ3
GALNT9
MAP7
LDLRAD4
NOTCH3
DRAP1
C11orf68
LRP6
MTIF2
MLLT11
CDC42SE1
GAD1
CALD1
FAM184A
MTRNR2L1
MARCHF3
ADAMTS5
OCA2
CD8A
NUF2
GRIK2
ATP9B
MMP9
MARCHF5
CPEB3
HOXB13
CER1
RCBTB2
TAF13
CHD2
GTPBP6
JMJD1C
GAB1
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
ESRP1
GNL2
RPRM
CCDC88A
NOTCH2NLC
GNB2
MRPS36
LMLN2
ABLIM1
UTS2B
CCDC50
BAMBI
PTGS2
CD101
NRL
PCK2
TBC1D5
UAP1
RET
ANKRD46
WT1
FRG2
SMAP1
HDGF
NSUN6
MIPOL1
E2F3
SNX14
PMAIP1
EML1
NTM
RAPH1
PCCA
AFF1
TFAP2A
PLPPR3
TBX22
BOD1L1
RGPD8
RGPD5
RGPD6
PNMA1
LRRC59
CGB3
LHB
WWC2
MAML3
ID3
TEAD4
OAZ1
PTPN18
WDFY1
NARF
GIT1
ANKRD13B
GRM1
CYBC1
PCDHAC1
ARL4A
ZNF609
DNAJC6
C3orf52
SLC20A1
SMIM8
ZFYVE16
KANSL1L
COPS7B
VANGL2
ERCC1
DGAT2
RAB23
BAZ2A
ATXN7L2
GPR180
ZNF521
P2RY2
SHISA8
NCOA3
FAM168A
HTR5A
IKZF5
ACADSB
HINT3
USP47
FEM1C
TRDMT1
NFIA
ASCC3
RCAN3
KIF2C
FBXL12
RANGAP1
ZC3H7B
LEMD3
LOC100287896
LIPT2
SRF
FAM162A
CCDC58
JDP2
MARCHF4
LSM14A
C4orf36
RNF213
OR1E3
XKR7
ROR2
SOWAHC
SEPTIN10
POLE3
C9orf43
KHK
USP15
AMOTL1
SLCO5A1
TSPAN12
PARL
EPN1
XPO5
POLH
OCIAD2
MTRNR2L9
GTF2H2C_2
GTF2H2
PPT1
REEP5
C1GALT1C1L
FAT1
GADD45G
LHX1
FDXACB1
C11orf1
SAR1B
MAST4
ZNF775
C9orf40
REST
SLC4A9
PMF1-BGLAP
PMF1
LPCAT3
PRC1
KDM5B
MTDH
LRP12
RRP8
ILK
MRPL39
SYNJ1
BMF
FAM227B
DTWD1
MFAP3L
TMEM121B
TLE1
BCL6
SMPD4
MZT2B
ANKRD18A
RNF103
IFT52
USP37
CNOT9
TULP4
IQSEC3
ERLEC1
ASB3
NRSN1
GGT7
ACSS2
E2F2
OR8B3
ARHGAP28
MCOLN1
IGF2BP3
TLCD5
ZNF839
MMP24OS
MMP24-AS1-EDEM2
LRAT
ZNF341
ZBTB45
FRA10AC1
TNPO1
TTC39B
NMRAL1
HMOX2
PICK1
CHST13
EIF2B2
NCOA5
PIGO
RFESD
MEX3B
BAIAP2L2
CCNH
BCAP31
ABCD1
CDKN2AIPNL
AGO3
AQP2
GLRA3
AVPR1B
RNF11
CRBN
PTBP2
BPTF
TMEM250
SHF
CEMIP2
LTF
MOB4
CDH15
HEXB
PXK
MNAT1
CHN2
SLC1A1
CPVL
TNFRSF12A
CLDN6
NAV2
LOC728392
TCEAL8
UGT1A3
RTN4
ERMP1
RNF6
TMEM215
SLC44A1
DCP1A
CXCR5
NCOR2
RWDD1
ACSL3
KLHL18
KIF9
EXD1
CHP1
SCOC
LRCH1
CPNE4
PCBP1
MRGPRG
GRID2
CTNNB1
DDIT4
GARS1
TBPL1
CASP3
EXOC2
USP42
UBE2D2
MYO6
TPI1
WBP1L
CBWD5
CBWD3
ZNF395
ERI1
SPSB2
ZNF197
COL26A1
CCNL1
STX16
CAMSAP2
TMEM132A
PDE1C
GRM2
LAYN
BCR
KIAA1841
POLR3E
SPATA18
MRPL2
KLC4
AK3
SOCS2
OXTR
BRIX1
PPIH
MANEA
USP53
FGF1
FOSL2
OPRM1
ROR1
RPGR
PDE4B
ARHGAP26
FXR1
ERBIN
TCF7L1
CECR2
TUBB
MDC1
ZCWPW2
AZI2
FNBP1L
SMIM10L1
PRH1-TAS2R14
ZDHHC23
NUDT2
RFX4
GLIPR1L1
CAPS2
HSP90AB1
VPS28
CERCAM
XYLB
OAZ3
ELMO1
SEC22A
HTR1E
BICD1
NPIPB9
NTSR2
HMGN2
ZNHIT3
NFE2L3
LAMC2
KLF17
ZNF641
NDRG2
HECTD1
GTF2H2C
AAR2
ARHGEF40
OSBP2
GDF7
MRPL38
PIK3R3
VCAN
UBA1
GABRG3
ITGB1
TMEM170A
HEXIM2
SLC24A1
INTS14
MRM3
GLOD4
AKAP12
NGFR
TFAP2D
KBTBD2
ZNF354A
PDE8A
HDAC2
GADD45B
ST6GAL1
C12orf73
EYA3
NMNAT2
CFAP161
NPIPB6
DESI2
NCBP3
ATP23
B3GLCT
MAP2K1
FABP6
HEY2
CDC42EP3
EIF4G1
LIG4
ABHD13
CPLX2
BHLHE40
EFHD1
HERPUD2
PRDX1
ELK4
KATNA1
HABP4
DNAJC10
MSRB2
IFNGR1
FAM120B
ZFHX3
MEIG1
ZNF385A
ULK2
TTC9
DLL1
NANOG
MAPK15
CCPG1
C15orf65
KSR1
ZNF654
CGGBP1
GNAI2
WNT5A
KIFC3
NUDCD3
FCHO2
PHIP
PRMT5
NIT2
PRMT9
UCHL1
ATAD2
MLLT6
VDAC1
PLEKHM3
GGH
SOX12
AMFR
CBWD6
CCDC107
NXPE3
FYN
NLGN1
NAALAD2
PDE8B
KCNH5
ZNF165
MCM7
AP4M1
SEC62
METTL2A
AKAP9
TMX3
CCDC102B
FGF19
OR6J1
C12orf42
DHRS13
PET117
KAT14
USP22
LIMK2
CHIC2
MED23
RIPK4
CYP2R1
C16orf92
TUT7
SDHA
CCDC127
MTARC2
CDK6
PRDM8
DHRS3
ARL6IP1
THAP4
ATG4B
GNAS
IQCH
AAGAB
BTC
EPCAM
UBE2B
CDKL3
SLC35E2B
RUSC2
RMDN2
NOTCH2
TRIM9
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZC3H6
MTF2
HIVEP2
GTF3C3
L1TD1
SETD7
MDFIC
CYP26B1
CLTC
XRRA1
SPCS2
BAIAP2
TGFA
PRKAA1
ZNF860
OSBPL10
EXOC6B
PRUNE2
FAM151B
MKX
ZNF419
ANKK1
CCNI
LRRC37B
RUBCN
FYTTD1
DMRTA1
AMPH
GPC6
SLC39A6
CDC37L1
SLC34A3
RNF224
CYSRT1
SALL2
GATAD2B
UCHL5
RO60
INKA1
CDHR4
MBOAT2
TEKT3
TMEM242
ZNF48
PHTF1
RTKN2
ANKRD12
TOR2A
PPARGC1A
FAM222B
PROSER1
NHLRC3
SYN2
PABPC5
TBL1XR1
ATP5MPL
STX18
TEFM
NRSN2
FAM177A1
COL23A1
PLCH1
RIMBP2
TRIAP1
GNAL
RBM15B
PDE4DIP
MMP2
PLK3
DSTYK
TPD52
SKA3
MRPL57
PARK7
DNAJC3
FGFBP3
RPTOR
KLHL23
HES1
RAD54L2
DCP1B
IL20
TMEM267
PHACTR2
NDUFS3
KBTBD4
FILIP1L
SPEF2
ADAMTS3
SFRP2
IQCF2
FAM153B
RBPJ
NLE1
SPAST
ANKRD50
SLC30A5
TAF12
CCDC71L
DNAJC19
CYP2U1
SLC44A2
NOTCH2NLA
METTL9
DYRK3
C8orf37
SLC35A3
FAM98B
MTMR6
SPOP
UROD
HECTD3
LLPH
AFF4
EBAG9
ASAP3
TMEM263
SUMF2
EEF1AKMT1
EXD2
CALB1
EPHA1
FAM221A
SOWAHA
DUX4
NKX1-1
NFKBIA
STMN3
MAP3K4
KTN1
RTEL1
ADNP
SIK2
SNAPC5
FAM107A
BORCS6
HNRNPR
TIPARP
PURA
BLMH
AMN1
GALNT15
HCN1
KDM6B
CALM2
KANSL3
FER1L5
AFG3L2
TMEM37
ATAD2B
STEAP3
NAA40
HTR7
PAK1
CCDC69
CRYBG1
GNG3
BSCL2
FUT1
FGF21
CDKN2A
CNTN4
SST
SEPSECS
DDHD1
ARIH1
SLC2A9
NAT8L
KRT82
KCNQ3
RBMS1
PAWR
MND1
FUT8
PPP1R13L
POLR1G
TGIF1
NR1H3
ACP2
AMOTL2
KCNH1
MUC12
LYRM1
DCUN1D3
C15orf40
DLX6
CTSL
FKBP5
HIPK1
ARMC12
INTS12
GSTCD
GAREM1
RCOR2
CRYAA
CRYAA2
VDAC2
CCN2
RNF166
CTU2
AIFM3
SERPING1
RCL1
ARID2
METTL2B
NOTCH2NLB
LONP2
ABCC11
SNTG1
PAFAH1B2
PLAAT1
SEMA6A
PLCL2
FAM83B
MRPL40
HIRA
SSBP2
TSKU
SYDE2
STK17A
TPK1
SEC11A
VPS18
GEMIN4
TJP3
B3GALT1
TPTEP2-CSNK1E
BEST4
THOC2
AS3MT
VGLL3
GAD2
CCKBR
MEF2A
HNRNPA2B1
CBX3
SLC35E1
EIF3A
CHST15
BAZ2B
TTC14
MAP2
POT1
FBXO10
KCNN2
HS3ST2
MRTFA
FOXN3
STK32C
LRRC27
AP3B1
CACHD1
CNTNAP3
CALM1
UBN2
PKN2
HNRNPD
IL11
UAP1L1
NCKAP1
MAT2A
CABIN1
CCDC59
ZBTB2
TAP1
PSMB9
SPAG1
MPHOSPH8
ARL5A
TCF12
ELF2
PTPN4
TTC23L
FERMT2
ZNF846
TRMT6
MCM8
ZDHHC1
ASB13
RBM47
ADRA1B
ADAMTS18
RBP1
TMTC4
GCLM
TCTE3
ERMARD
ACOT7
LSM5
AVL9
FOSL1
TTLL7
PDLIM5
BHLHE41
SYT14
CARNMT1
DHRS4
DHRS4L2
HES6
PSMF1
IPO13
NSUN7
DTD2
SNX25
ATXN2L
ARHGEF1
RRM1
RANBP2
FBXO22
SMPDL3A
RB1
NUAK1
MECOM
TFPI
USP3
PCID2
CUL4A
HBS1L
FRMPD1
STXBP5L
CD99L2
CKAP2
FZD1
LDHA
VPS36
KANSL1
RWDD2A
PGM3
RAB11FIP3
MAP4K5
ATL1
MB21D2
OR2T1
SNTG2
AGPS
POLD4
USP30
C8orf88
TATDN2
THRB
SPRYD7
LDLRAD1
GPHN
IFRD2
KIF21A
HECTD2
SPATC1L
ACOXL
FBP1
CORO2A
BARD1
IL17RA
RBIS
TCF4
IKZF3
ZPBP2
COMMD8
TRAPPC11
RWDD4
MMUT
CENPQ
FGF9
SLC35G4
JAM2
SOX14
ELAVL2
OTUD7B
KCTD18
SUGCT
MPLKIP
ZSCAN22
ORC5
LOC101928764
LIMS1
GBA
SSH2
EFCAB5
PIK3C2B
PATZ1
PRLHR
ZCCHC18
LOC107986453
TLCD4-RWDD3
TLCD4
SRSF7
YARS1
S100PBP
PIGH
DUSP6
PSIP1
OTUD4
FAM174B
WTAP
SOD2
NUP153
COG2
SDE2
EFCAB14
UQCRC1
SRSF5
ZNF280C
SUPV3L1
KATNIP
GTF3C1
GALNT3
DENND4B
FGD4
IPP
ZNF594
MKS1
ATR
LNPEP
NCR3LG1
KRBA2
ASAH1
FEZ2
PRSS16
TIMP4
NOS3
FGFR4
URB2
TAF5L
SIDT2
GPR88