ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976444 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◣ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PRKAB2
CHD1L
FBRS
NOS3
ZNF595
ARID3B
PGLYRP4
OPLAH
DNAJB2
P2RX6
SKIL
PPP6R1
ID2
FZD5
PRAME
SIRT1
COPS8
H4C4
H2BC6
NDUFAB1
STK11
MLLT11
CDC42SE1
JMJD1C
AXDND1
CANT1
MTIF2
GNB2
LYL1
AMD1
CDK19
CALCOCO2
SEPTIN5
GP1BB
SLC4A1
FDXACB1
C11orf1
STAM2
SPATA9
RHOBTB3
LPCAT3
FRG2C
SSH1
SERPIND1
SLC6A9
RFX1
FBXL13
ARMC10
C3orf86
CFLAR
MTRNR2L1
OLFM2
UAP1L1
SAPCD2
BTNL10
NR4A1
DIP2A
NPAS4
TANGO2
MIPOL1
ZNF148
LRRC61
SLC7A6
RNF103
SSBP2
THUMPD1
CLTC
DRAP1
C11orf68
EXOC2
RCOR3
TUBB
MDC1
SMCO1
DGAT2
NFE2
BRWD1
EPB41
HPN
BRPF1
RNFT1
RIPOR3
GBA
MOB1B
DUX4
FCER2
TMEM164
FBLN2
ID3
EPS15
SEC24C
HOXB8
MMP20
PTP4A3
ATAD2
TRIB3
CXCL2
LZTR1
DRC7
ERMN
ZBTB45
ZNF664-RFLNA
ZNF664
CCDC92
UBE3C
TRMT2A
RANBP1
BAMBI
MRPL40
HIRA
LEMD3
TUBA1C
USP9X
TMEM87B
TMEM222
N4BP3
H4C5
ID1
HNRNPUL1
KCNC3
MARCHF2
PRMT3
CCDC88A
GRHL3
ARL8B
MAF1
ZNF341
HDAC6
SFT2D2
FAM83A
LRRC37A3
ALAS2
KDM6B
TRIM69
SRF
VWDE
JRK
ZSCAN31
ZKSCAN3
SGK1
NUP107
PPP5D1
CALM3
ATP8B2
AQP10
KLF10
PYCR2
ASPSCR1
PLAAT4
LARS2
ZC2HC1C
ACYP1
WDR97
VDAC2
KDM7A
KMT5B
HTR5A
HNRNPR
GCGR
RBPJ
H2AZ2
TCP11L2
PTPRF
ZNF367
PRELID3A
CARD8
UCP3
TSPAN32
C11orf21
CARHSP1
MAPK1
TEX46
KDM1A
TAL1
SMARCD3
SPATC1L
IQUB
CDH15
SUMO3
SLC16A1
KLHL18
KIF9
PRKAB1
FRG2
UBE2F
C19orf25
BLOC1S6
HMX3
CALM2
NDUFA4
DDIT4
LOC100287896
LIPT2
RSAD2
TBC1D5
ZNF77
CLK3
MGAT5
CHCHD2
LRP12
ARHGEF1
BMPR2
P4HB
CLUL1
KIFAP3
SAMD11
STRIP1
MAN2A2
ZNF697
SMARCD2
DHX40
NR1D2
NKIRAS1
NAGLU
ACVR1
TLR5
LAPTM4B
SPIN1
IL1R1
PHF19
RNF220
ABCB10
ERAP1
ATG9B
ABCB8
USP3
C10orf95
BCR
ARPC1B
MIF4GD
CLPX
SLC45A3
UAP1
MACC1
UNC5B
SARAF
YPEL1
MAP7
FDPS
XKR7
GLIPR1L1
CAPS2
FOXN1
CALM1
TMEM120A
QRICH1
BCAP31
ABCD1
SLC20A1
LSM10
GSE1
MIS18BP1
TMEM72
CDK5RAP2
ZBED1
DHRSX
BSG
AP2A2
SLC43A3
TNFAIP8
ZNF451
KIAA1586
CCNI
INTU
IQSEC3
UBE2H
MRGPRE
MTRNR2L2
MSH3
DHFR
GSDMD
LHX3
RHEB
RNF166
CTU2
TMEM9
RALGDS
KMT2A
SLC44A1
BDH1
SKI
EP400
PLEKHF2
APOC4
APOC2
SPDYC
HUS1B
PPIP5K1
CKMT1B
RRP8
ILK
ADNP
ZC3H6
ATP5F1E
RWDD1
NUDT19
PTPRM
PPP1R3E
GUCA1B
ZAP70
ILKAP
ANK1
GAL3ST4
SLC39A13
DCK
NBPF1
CDKN2AIPNL
TUFM
SH2B1
LZTS1
CRKL
DVL3
PCNT
C21orf58
UTP11
LRP6
GTDC1
ACP6
THAP11
NUTF2
CENPT
GYPB
SPINK4
PLEC
TBL1XR1
RIMBP3
BCL7B
TLK1
HERC1
TGFB1
CAT
USP32
BCKDK
LSM2
KSR1
ZBTB8OS
RBBP4
GNB4
CCDC88B
SLC25A21
MYL12B
RDX
SFSWAP
ORAI1
DNAJB12
SLC35E2B
PPIL2
NTMT1
CCNL1
VPS29
RAD9B
ADGRB3
BICD1
ADAM17
CTSL
HNRNPH1
POLR2J3
CTNNB1
CEBPG
HIBADH
KMT2E
ST3GAL2
OXR1
FAM102B
RNF11
DGCR8
GCLM
SLC16A3
MRPL38
EPB41L1
YTHDF2
KIAA0232
WIZ
GTF3C6
UFD1
CDC45
PIGQ
NHLRC4
USP31
RAI1
ZCCHC14
C22orf39
TRIM58
DGAT1
GTPBP6
ACVR2A
BTG2
PICALM
DDX39A
CMTR1
ZNF280D
MME
SQSTM1
VIM
QSER1
PLK3
RRP1B
HSF2BP
C12orf43
HM13
OBSL1
INHA
ATP7A
CPT1A
STK40
ACP5
ODF3L2
TBC1D14
PARL
KMT2C
DESI2
KRBA1
HERPUD2
NOTCH2NLA
SPRED2
HMBS
SNAP29
PI4KA
RSF1
AAMDC
ST6GAL1
SNX14
MEMO1
RTN4
PPP1R13L
POLR1G
HES1
PXT1
KCTD20
SLC35E2A
CIZ1
DNM1
ARL6IP1
UNKL
PRR5
MOB3A
IZUMO4
PTPDC1
FCHSD2
ECH1
RAP1A
WDFY1
SETD5
ZBTB7B
ZBTB40
ZNF217
RAB32
CCDC97
KLHL12
SMIM8
BIRC2
UBE2B
CDKL3
TCF12
RUSC2
TBPL1
PTPN1
MAP1LC3B2
ANKS6
TBC1D13
H4C11
VPS13D
GABPB2
GYPE
DAB2
C1orf105
GATA1
PPFIA4
SERPINB1
ARID1A
BOD1L1
FZD1
RTN4R
LIN9
TBX6
YPEL3
PLD3
C19orf47
SMAP1
SOCS2
SCN9A
GTF2H4
TIMP2
FAM156B
FAM156A
TTC3
PIGP
ADAR
CCDC116
CYP4V2
KIF2A
SLC7A5
H4C12
RNF32
POMZP3
RNF187
ARL5A
KDM3A
DLX2
H4C2
H3C2
H2AC4
GTPBP3
ANO8
NCKAP1
LCOR
ZER1
KIF13A
LRWD1
ALKBH4
GOLPH3
LIN28A
COMT
GAS2L1
TOP3B
NADK2
MED15
CDH23
UBE2K
CCDC7
GFI1B
TSC1
MGAT3
ZNF746
TRMT12
SYP
ARL2
MTX2
CBX1
PER3
VPS13C
TMEM95
KCTD11
B4GALT7
RNF130
SLC39A3
SAFB2
SAFB
GDI1
NR2F6
PPFIBP2
PUSL1
ACAP3
TMEM50B
CKMT1A
USP42
DNAJC11
UBE2E3
TMPPE
GLB1
RPP25
DPEP3
RPS18
B3GALT4
MAP3K4
SYT7
ZNF180
SNX12
PARP1
TEX45
SP3
PPOX
ZNF592
CBFA2T3
STX18
GATAD1
DOLPP1
SET
PXK
CYP21A2
ZFPM1
MCUR1
WDTC1
PDXK
FAM83G
ATXN7L2
RAN
MYCL
ACSF3
VWA1
FKBP8
IL1RL1
ZNF165
PIM3
FOXK2
EVA1B
RCL1
IST1
THEMIS2
KCNH2
PMEPA1
HSP90AB1
USP22
SKIV2L
NELFE
TRIM67
SCAF8
CMPK2
LRP5
KEAP1
ASIC4
GFRA4
C10orf71
MTF2
UBE2L3
XPOT
BICRA
RABGAP1L
PGP
BRICD5
NOTCH2NLC
TMEM60
PHTF2
SCAF11
SNAI1
AMOTL1
FKBP5
ARMC12
SUMO2
NPIPB6
PLS1
HSDL1
DNAAF1
OTUD7B
AGPAT2
NCOA3
OPN3
CHML
MACROH2A1
RAI14
ACHE
CYB5R4
ZFP62
ACSL1
SDE2
ZNF76
KRT8
CHSY1
TAGLN2
ADAM8
FABP6
TMEM43
CHCHD4
CMIP
BCAP29
SPACA6
FSTL3
H3-3A
ABCA3
EEF2K
RANBP9
MFSD12
REEP5
C6orf89
MRPL2
KLC4
CDKAL1
VPS26C
TPM1
ADK
MAML3
KIF22
DOK4
AMN1
ZFYVE1
CPLX2
VDAC1
ATP5MPL
SEC14L1
ANO10
ABHD5
ZNF555
DHTKD1
UPF3A
GPR176
WASHC4
GSPT1
TPT1
TMEM14B
H4C8
MAP1S
ACACA
DPY19L4
CARNMT1
ELK4
C8orf88
HCFC2
GLT8D2
PPP1R37
ATG9A
ANKZF1
THAP7
MAPKAPK3
CISH
PGBD1
CBX4
REST
TCTEX1D4
BTBD19
GPT
FAM3C
MFSD3
TCERG1
SPIRE2
TMEM243
RTL10
GNB1L
RNF214
PCSK7
TLE2
ZNF22
PHTF1
METAP1
MIER1
AJUBA
SOX12
FAM199X
ANPEP
TPBGL
PRPSAP1
GNB1
RABGGTA
FGGY
NDUFS7
DHRS12
ETFA
PTMS
ZNF354A
PPIH
TIGAR
SIL1
CHIC2
RIPK1
PDIA4
MARCHF3
OCA2
TMED1
RYBP
PGRMC2
CSRNP1
NPIPB9
MTCH1
TGIF1
FGD4
SETD2
ZC3H7A
ATXN2
MYLIP
PDE8A
BROX
AIDA
CCDC124
AIG1
TXN2
SLFN14
GZF1
RAPH1
NUDCD3
CASP3
TRIM44
TSKU
TUBGCP3
ZNF398
ZNF425
ABCF3
SPG11
ETFB
CTF1
BCL7C
PHACTR2
AP5B1
NSD2
NKG7
CLDND2
TRIB1
MTHFD1L
FAM207A
GALNT11
ESCO1
CSGALNACT2
DAPK2
NKX1-1
WDR62
THAP8
SESN1
CEP57L1
WASL
IL4I1
NUP62
ATF5
SYDE2
KHSRP
TP53BP2
SPRED1
KIAA1522
CCP110
UBL7
DDI2
RNPS1
FZR1
CRIP1
TEDC1
MEF2A
LSM14A
MAP3K5
AQP1
KBTBD2
DCAF10
FAM76A
DGCR6L
KANSL1
ADGRG3
NFE2L2
DNAH14
ORC2
LPIN1
RP9
GGACT
WASHC1
SREBF1
RTBDN
ARAP3
TMEM117
TARBP1
FKBPL
ATF6B
NFAT5
PTBP3
TM7SF3
MED21
SESN2
PAQR7
NANOS3
CHST11
RRAGC
TCF25
XRRA1
SPCS2
RILP
WTAP
SOD2
LEPROTL1
CABIN1
SCARF1
XPO5
POLH
TRPM7
FAM120AOS
FAM120A
FAM110D
RAB7A
PSMA1
NOC2L
KLHL17
PDE3B
NDE1
MARF1
ESYT2
USP6NL
GCK
SNRNP35
APOL4
CCPG1
C15orf65
DYRK3
PDS5A
PTCH1
ZMIZ1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MFAP3L
OSER1
PRRC2A
AIF1
ERCC1
CD8A
ASIC1
SMURF2
PANK1
TMEM50A
CBX5
FBXO4
NUF2
BPTF
NLE1
ZMYND8
SREK1
USPL1
HMGB1
IKZF3
STAT1
RPS14
ZBED9
PTP4A2
KMT2D
KMT5A
MED14
DHRS13
FAM168B
RSAD1
TAB2
NKIRAS2
GNG8
CELF3
PTGIR
IER3
FLOT1
ATF3
SAMD4A
PXMP2
POLE
PDE4A
REEP2
CLTB
KAT6A
RIMBP3C
RIMBP3B
DPEP2
HEY1
SHANK1
CLEC11A
ZBTB44
MSANTD1
NARF
FAM89B
EHBP1L1
ZNRD2
HABP4
PAXBP1
ZBTB14
MATN1
RINL
TEFM
CMSS1
C6orf226
NCR3LG1
RCC2
HPCA
FAM210B
H4C3
H1-6
SRRM3
SERPINB9
ACAT1
SLC25A33
ARL4A
SUN2
PHF21A
PPP1R15A
PLEKHA4
ZNF521
UCP2
CDKN1A
INKA2
DDX20
C11orf24
STAP2
MPND
TEAD1
WDR55
NFYC
TRIM56
UROD
HECTD3
DSTYK
LTB
SS18
TM9SF3
LPGAT1
NRF1
VWA7
PHKA2
TNNI3
MAPT
RGS20
DUSP4
GAGE2C
GAGE2B
GAGE2A
TNIP1
ZNF48
GORASP2
METTL2A
SPNS1
ADAM15
SLC35F6
GMPR
PRC1
TOE1
MUTYH
IBA57
CASC3
SLC25A51
TOR1AIP2
TOR1AIP1