ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499856 | iPS cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◣ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
NKX1-1
FAM24A
HDX
INSM2
MTRNR2L1
IQSEC3
HTR5A
FRG2C
RTBDN
LIN28A
XKR7
ENOSF1
GLRA1
CELSR3
DUX4
EPHA10
TAS1R3
CPLX2
ATL3
FRG2
KCNH7
RAB37
SMIM17
L1CAM
SNAP25
OSGIN1
ZFR2
MAPK8IP2
PPY
HPCA
PRLHR
BARHL1
LHFPL4
ZCCHC7
NTSR2
TRIM44
LEMD3
ZFYVE27
ABCA3
SHISAL2A
SP5
EVI5
COL23A1
SST
MTRNR2L2
MSH3
DHFR
VPS29
RAD9B
ZNF354C
UPB1
ZNHIT3
LAMP1
COPS8
DLGAP3
CYB5R4
GTPBP6
MARCHF4
HES6
WDR36
RFC1
STMN3
RTEL1
ACTL6B
GFI1
CPNE9
PRUNE2
OPRM1
CYP2R1
PTPRS
SLC39A3
EPN1
NPPB
NEUROD4
SWSAP1
LHFPL5
ZNF280D
CELF6
DHX40
UNC80
CEP295
GPR26
GCK
MYL7
STOX2
PMEPA1
PTP4A2
PCNA
CRYAA2
CRYAA
NEFH
PUS3
DDX25
PRMT8
SIGLEC10
PDE4C
TOMM5
ADAMTS15
FAM111A
DYRK4
SNTG1
RASSF10
ZSCAN30
ASCL2
TMEM185B
GABRG2
CDK5R2
GRM2
KHSRP
DCHS2
FBRS
XKR4
GJA10
KLHL35
DNAH14
RAP1GAP
RHBDD1
RAX
PTPRN
NEUROD1
NEK3
DLL3
ALK
SRRM3
NOC3L
CNTLN
CACNG3
HHIPL1
CCDC85C
SMC1B
RIBC2
SLC12A5
ADCY4
EIF2B3
RANBP3
PRKAB2
CHD1L
ACSS1
SCGN
TRIM59
HENMT1
UTP11
RNF130
HDAC2
FOXRED2
KCNK12
SLC7A14
UCN
CCDC92B
VGF
OGDHL
AP3B2
TLL1
KCNB1
CACNA1B
VSTM2B
SPDYA
ODC1
PDE1C
HS3ST2
SCG3
TDRD5
CHGB
HNF4G
TEX45
H4C11
EZR
ZNF416
ZIK1
NMNAT2
EGR4
SRP19
RTN2
PPM1N
PPP1R3D
FAM217B
TTYH2
KCNH4
HCRT
KDM3A
APOLD1
HEPN1
ITPRIPL2
PPP1R3C
E2F6
WDR74
GIT1
ANKRD13B
CEMIP
USP14
HBQ1
HBA1
ASIC3
LINGO1
SPAAR
DIABLO
CRH
GPR78
SRRM4
CPQ
H2BC12
H2AC12
TNFRSF9
IKZF3
ZPBP2
SEH1L
BICDL1
CBY3
PKDREJ
MANEAL
CDIP1
TK2
CKLF-CMTM1
CKLF
PAX5
CCNL1
PCSK1
SFRP4
EPDR1
BMP4
NEXMIF
ZNF75A
TIGD7
GLYATL1
ZBTB32
VIM
NADK2
NTM
RNF32
AIP
STEAP1B
ARFGAP3
CARTPT
PGRMC2
PRG3
GPR158
H4C9
RPH3A
CD163L1
RRP1B
HSF2BP
TBX10
TRIM26
CCDC88C
MARCHF11
GET4
DDX56
GLS2
C3orf14
MCM6
HHATL
CTXN2
DIO3
SIRT4
CHRNB2
RPP25
CHGA
MFAP3L
FZD4
TASOR
GPR6
TPH2
UGT8
TCHH
ZCWPW1
MEPCE
DNAJC6
PRDX1
ZNF292
GRM1
SRSF7
CCDC116
CDK5RAP3
RAMAC
FZD9
RESP18
H2BC5
H1-4
LMLN2
CCND2
SYT5
SLC35F4
NSG2
RPL14
ZNF664-RFLNA
ZNF664
CCDC92
PLLP
COPS7A
SOX30
UBE2Q1
B3GALNT1
ST8SIA3
STAG3
GPC2
FAM221A
TMEM107
TUBGCP3
ZNF131
ASNS
EIF5A2
CCT2
KCNC1
SPHK1
DNMT3A
ZNF501
VWC2L
BEST1
FAM185A
H4C12
SUGCT
MPLKIP
SLC6A11
GABRD
CD8A
H4C15
H4C14
RBM18
MRRF
KPNB1
INPP5F
KLF9
TLX2
GHSR
GDAP1L1
PRR3
GNL1
TNN
MOB4
ANKLE2
TAF7
CLDN11
TDRD10
SHE
WASHC2A
TRIM14
SLC9A2
ZNF148
POLE4
C10orf88
GRIA2
CD37
CXCL5
ACTA1
TACSTD2
TSEN54
CASKIN2
LRRC8B
DR1
RPL13A
SP8
ZNF485
ATIC
UBE2G2
ADNP
STK25
FCMR
CCDC169-SOHLH2
CCDC169
FAM184B
CCNI2
NHLRC1
POLDIP3
CYP1B1
ZNF239
AVPR1A
H4C6
NOP14
GRK4
CDC16
ERVMER34-1
SLC16A8
FJX1
PIP5KL1
CCNB1
MESP2
UBE2D3
CISD2
SKA3
MRPL57
MGA
SYCE2
VCL
ORC2
H2BC11
H2AC11
NDUFAF2
ERCC8
BCL7B
MTHFD2
TMED1
PPIA
H4C4
H2BC6
H1-2
PMVK
RAB4A
H4C7
H3C7
H2BC9
NRXN1
SLC6A4
H4C3
H1-6
RRN3
C3orf80
CLCN7
CHEK1
SNX14
EGR2
AGPAT5
CETN3
AKAIN1
JMJD1C
PANK2
EFCAB13
SIGMAR1
CALB1
MTIF2
L3HYPDH
JKAMP
ITFG2
RAD50
TEX30
IRAK3
CALM2
GCFC2
TMX3
CCDC102B
H4C2
H3C2
H2AC4
SMPDL3A
HNRNPR
CASC3
NOS3
ARL14EP
ZNF420
SYNJ1
CASD1
ERBIN
FANCA
ZFP30
MTF2
EBAG9
THUMPD3
ERCC6L2
C5
CNTRL
H2BC4
H2AC6
EXOSC3
RAB11FIP1
EEF1A1
ALDH3A1
CNBP
LUC7L
FRG1
SKIL
ARID3B
ID2
ERCC1
SIRT1
MLLT11
CDC42SE1
SMAD7
FDXACB1
C11orf1
TMEM95
KCTD11
OLFM2
STAM2
SERPINE1
RBPJ
DNAJB2
PPP6R1
RNF103
ANXA8L1
ID1
ID3
TRIB1
MTRNR2L8
PPP1R13L
POLR1G
LPCAT3
MIPOL1
GIP
GNB2
FZD5
BIRC7
LRP12
FSTL3
BMPR2
SMAD3
GSDMD
DHRS3
KLF10
F2
LAPTM4B
KDM6B
SLC7A5
HOXA3
CCDC88A
EXOC2
EP400
UAP1
NDUFAB1
ZNF341
LRRC37A3
ZNF595
ATAD2
MARCHF3
ANXA8
TMEM9
GLIPR1L1
CAPS2
UBE2F
RCL1
RCOR3
MRPL2
KLC4
CLDN14
TUBB
MDC1
ZBTB45
CLTC
PDLIM7
MTHFD1L
VDAC2
RNF213
SLC45A4
USP42
BCAR1
TAF9
RAD17
AK6
LIMS1
PLEC
POLR2J3
RHOQ
ATP6V1E2
TBC1D1
DRAP1
C11orf68
NTMT1
TGIF1
SLC7A6
COL7A1
BCAP31
ABCD1
BRWD1
TMEM222
MRPL38
MMP20
SPACA6
OPLAH
AIFM2
BRPF1
DUSP1
ACVR1
PLK3
CAT
LRP6
SREBF1
SPIN1
MDM2
LMNA
SLC44A1
PLEKHA7
LRRC61
FBXL13
ARMC10
RBFOX2
DGAT2
P2RX6
BAMBI
FCRLA
ADAM17
JRK
HPN
PGLYRP4
CFLAR
H2AZ2
TEX46
PLEKHF2
OTUD7B
RWDD1
E2F3
MFSD10
LURAP1L
RGS3
TBC1D14
PLOD2
GPT2
GZF1
GPC6
STK11
ARL6IP1
ST6GALNAC6
HERPUD2
KDM1A
FURIN
ITPK1
TNFRSF12A
CLDN6
SPATA9
RHOBTB3
ETFB
PHETA1
CCNL2
PIK3IP1
CTNNB1
NRL
SH2D6
MAN1A2
CANT1
USPL1
HMGB1
ZFAND2A
LARS2
TRAF7
SH3YL1
ACP1
ZC3H6
NDE1
MARF1
THOC6
HCFC1R1
BHLHE40
KANK1
PIM1
NFKBIA
AMD1
ARFGEF2
CCPG1
C15orf65
SMAP1
PSPN
ALKBH7
TAGLN2
NOTCH2NLC
PIK3R1
THAP11
NUTF2
MAP3K4
KRAS
CENPT
SERPINB1
CFL1
CDK5RAP2
TNIP1
TLE1
MACC1
SERPIND1
IER3
FLOT1
INHBE
WDFY1
TMEM268
NFE2
SLC39A7
RXRB
ANKS4B
NR1D2
NKIRAS1
CALM1
EPB41
SKI
RNF19A
SQSTM1
ASIC1
ADAP1
LOC100287896
LIPT2
PUF60
TMC7
SPATA25
BCKDK
MET
LRP5L
ERRFI1
ACACA
RNF144A
RNFT1
HPCAL1
CCL16
PRAME
HIBADH
CDK19
S100P
UBE2B
CDKL3
ZBTB38
CYP26A1
RFX1
NEU1
NR4A1
C3orf86
KDM7A
KANSL3
FER1L5
SYNPO
CTSL
NODAL
SLC39A13
SERPINB6
NDST1
SMIM11B
SMIM11A
ARL4A
ASB2
XRRA1
SPCS2
SLC20A1
TUBG1
RETREG3
FOXJ3
MRPL40
HIRA
EDARADD
ATXN7L2
CPT1A
SSBP2
MARCHF7
LZTR1
ZBTB4
SLC35G6
RARA
SEPTIN9
ZNF22
TRMT2A
RANBP1
SARAF
POLR2A
NEURL2
KMT2E
CTSA
AGPS
GNL2
TUFM
SH2B1
NCOA3
SDC4
KBTBD2
FHL2
LMO7
SEPTIN5
NOTCH2NLA
ZC3H12A
TTC12
NR2F6
SLC6A9
FBF1
RALGDS
KTN1
BRIX1
RRP8
ILK
CDH15
THEM4
OBSL1
INHA
PPP1R3E
DGAT1
USP32
NTAN1
ARL6IP4
INAVA
CCN2
NDRG1
ZSWIM7
TTC19
MTX2
EPS15
CCNI
TSPAN10
NPLOC4
ITGAV
MYL12B
GRHL3
SSH1
ADGRG1
FAM107B
MKNK2
MAPKAPK3
CISH
TACC1
HOXD12
RNF11
H6PD
TTC38
BDH1
MLLT6
C15orf39
ATP6V1G1
STX1A
TMTC4
NARF
ACSL3
TRDMT1
ST3GAL2
ADK
SLC6A12
GCLM
ESRP2
WWC2
NDUFAF6
KIF13A
ZNF165
PCK2
NCS1
UAP1L1
NCOA5
ZNF367
ARL5A
OSBPL6
TSKU
ARL8B
EPHX1
DIP2A
NCKAP1
AXDND1
TBL1XR1
PRMT3
H4C5
THUMPD1
SLC25A45
OPRL1
LKAAEAR1
FRMD8
TRIB3
AKAP1
DPY19L4
ZP3
GP1BB
ANKRD46
CMIP
LYL1
SAMD11
H3-3A
ITGAE
DCK
SLC16A1
NUB1
FST
FASN
MAPK13
CLTB
KLHL18
KIF9
SCT
CDHR5
DNAJB3
APOC1
UBE3C
DHRS13
ZNF592
ZNF697
MAF1
SULT1A4
SULT1A3
NBN
SYNRG
LRP5
CPPED1
BAIAP2
IRF2BP2
DNAJB12
NBPF1
EPB41L1
ERBB3
CARHSP1
HEY1
DRC7
TRIOBP
DDIT4
ZKSCAN2
CBFA2T2
KLHL5
SRF
NUF2
SERINC2
SPATA20
CDK3
RAPH1
IL1R1
BPTF
SSNA1
ANAPC2
BICD1
HES1
SMARCD2
BUD13
DNAJB1
USP9X
CALCOCO2
PHLDB2
ZNF101
ATP13A1
SEPHS2
ANKRD28
APBA2
PHF19
WEE1
RILP
DNAJB5
CDKN1A
ACSL1
PAQR8
NCOA4
KCTD18
AGAP3
ZNRF2
TEN1
ACOX1
POLD1
SF3A2
PLEKHJ1
ARHGEF28
ZNRF3
SLC49A3
PIK3R3
KMT2A
PTPDC1
SPATA1
GNG5
TMEM86A
DENND4B
GMEB2
PIM3
RGS19
RASAL2
CX3CL1
SEC31A
OSGIN2
UBE2K
MAML3
TANGO2
TBC1D13
AXL
DPP9
ZNFX1
DCAF11
IL13RA1
FGFR4
ATF3
WDR97
UBE2D2
FLOT2
DMTF1
PET117
KAT14
AHCY
TBC1D5
SMARCD3
FAM168B
IKZF5
ACADSB
NOL4L
TSPAN12
KIFC3
POLD4
ESCO1
RAB17
PPP1CB
WTAP
SOD2
PARL
KLHL12
SMURF2
PPP1R12B
NR1D1
IST1
GATAD2B
SECISBP2
CNNM3
PXT1
KCTD20
FRA10AC1
PKP4
CCDC148
TIGD2
GBA
LANCL2
TARS1
NKD1
SLC25A32
DCAF13
MIS18BP1
KLF4
SETD5
MRPL44
SYNJ2
CRLS1
SLX1B
SLX1A
FBXO4
BOLA2B
BOLA2