ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499855 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◣ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
NKX1-1
XKR7
HTR5A
FAM24A
IQSEC3
MTRNR2L1
HDX
TAS1R3
INSM2
FRG2C
RTBDN
RAB37
ENOSF1
SMIM17
DUX4
LIN28A
SNAP25
CPLX2
EPHA10
FRG2
ATL3
KCNH7
MAPK8IP2
CELSR3
GLRA1
GIT1
ANKRD13B
L1CAM
VPS29
RAD9B
LHFPL4
NEFH
SST
BARHL1
DLGAP3
ZFR2
OSGIN1
HPCA
PRLHR
NTSR2
LEMD3
MARCHF4
COL23A1
CPNE9
CELF6
DHX40
OPRM1
PPY
ST8SIA3
CYB5R4
ZFYVE27
NEUROD4
SNTG1
WDR36
RANBP3
TRIM44
SLC12A5
ANK1
SP5
SHISAL2A
CEP295
PRKAB2
CHD1L
SLC39A3
GPR26
EVI5
CYP2R1
UPB1
RESP18
CDK5R2
NPPB
RHBDD1
PTP4A2
HES6
SRRM3
FBXL16
STOX2
PTPRS
ZNF75A
TIGD7
ASIC3
KCNH6
ABCA3
PDE4C
CHRM4
SCGN
HHIPL1
CCDC85C
KCNH4
HCRT
STK25
PCNA
COPS8
ZNHIT3
ZCCHC7
RTN2
PPM1N
TMEM179
ZNF354C
GPR78
HES3
KCNK12
GRIA2
KCNC1
CEMIP
UNC80
DYRK4
LCLAT1
CADPS
CYP1B1
GTPBP6
WDR74
ASCL2
PRMT8
ZNF416
ZIK1
SIGLEC10
ZNF280D
NOC3L
ALK
NMNAT2
CPQ
SCRT1
LAMP1
E2F6
HS3ST2
CCDC92B
CTDSPL
CBY3
IKZF3
ZPBP2
USP30
KDM3A
SVOP
TNXB
GPR6
SLC35F4
NRXN1
CHGB
GCK
CDC16
CHRNB2
MYL7
ARFGAP3
GRM2
KCNB1
FZD9
PCSK1
RFC1
CRYAA2
CRYAA
BMP4
TEX45
OGDHL
PUS3
DDX25
H4C3
H1-6
MANEAL
NEUROD1
XKR4
SLC7A14
TMEM268
SOX30
LINGO1
ZCWPW1
MEPCE
CACNG3
PRUNE2
MARCHF11
TACSTD2
TSEN54
CASKIN2
USP14
SKA3
MRPL57
B3GALNT1
VGF
DIABLO
UCN
CD8A
ODC1
PKDREJ
ANKHD1-EIF4EBP3
ANKHD1
CACNA1B
VSTM2B
FCMR
SLC34A2
UGT8
VWC2L
GABRG2
KLHL35
PMEPA1
NEK3
ANKLE2
ITPRIPL2
ACTL6B
NEXMIF
CARTPT
TMEM185B
GJA10
ACTA1
PTPRN
TRIM59
UTP11
SFRP4
EPDR1
DLL3
LMLN2
COPS7A
GET4
SRP19
CD163L1
TPH2
RASL10A
RAX
STMN3
RTEL1
CPD
H4C9
RNF130
CABP7
TLL1
HNRNPR
TEX30
NPDC1
CDIP1
GUCY1A2
TMEM107
MAPK8
SEZ6L
HBQ1
HBA1
GFI1
RAB11FIP4
LHFPL5
MFAP3L
MYT1
FAM221A
PLCH2
EFHD1
ZBTB32
MLLT11
CDC42SE1
TUBB3
EPN1
CRH
PCP2
STXBP2
CACNG2
EIF5A2
FAM163B
SMC1B
RIBC2
TUBGCP3
EIF2B3
SYT5
ADCY4
CALM1
RNF32
KLF9
LACC1
CCDC122
NCAN
NKX2-4
RRP1B
HSF2BP
TASOR
TDRD5
ZNF564
GDAP1L1
MCM6
GABRD
SLC6A5
GRM6
FBRS
RAP1GAP
DRD2
H4C11
BICDL1
E2F3
KCNS1
CD37
PRLH
MIPOL1
H2BC8
H2AC8
MSH5
CLIC1
LRIT2
PGRMC2
OXT
STAG3
GPC2
ZNF664-RFLNA
ZNF664
CCDC92
EGR4
TK2
CKLF-CMTM1
CKLF
H3C6
C10orf88
CPNE4
SWSAP1
ZNF239
PPP1R3C
DCHS2
GPR158
HDAC2
AIP
TREM2
LHFPL3
SPHK1
ATP6V1B2
PSMD7
CHGA
MEX3D
AK2
XKR9
LACTB2
TMEM121B
IRAK3
H1-2
ATP2A1
SMPD3
MTHFD2
FOXRED2
C3orf14
TBX10
RPH3A
GSX1
POLDIP3
ISM1
FAM111A
H4C12
JMJD1C
DUT
ADNP
BCL2L10
CERS6
APC2
NTM
H4C6
KCNJ9
EXD1
CHP1
PLLP
MRPS36
MMP24
GDAP1
H4C2
H3C2
H2AC4
KHSRP
PRKAR1B
CCDC71L
GALNT9
GABRB3
ARHGAP45
SCAMP5
ZNF566
PGBD2
GRM1
NME6
ANKRD34C
FAM184B
CTNNB1
RXFP3
SLC25A13
DNMT3A
HDAC4
H4C8
HNRNPH1
TBC1D30
FAM185A
RNF212
MKLN1
TMED1
SIRT4
DNER
GPR88
COA7
LMCD1
PMS2
AIMP2
CCDC126
EPM2A
AP3S2
DNAJC6
EGR2
STEAP1B
ZNF148
ZC3H6
SRSF7
RASSF10
GTF2H2C
GTF2H2C_2
H4C15
H4C14
H3C13
H2BC18
USPL1
HMGB1
GCFC2
SEZ6L2
ASPHD1
ZSWIM7
TTC19
PRCC
ARL17B
ARL17A
AKR1E2
GLS2
NOP14
GRK4
MLF1
SPDYA
SYNGR3
SIMC1
ICE2
PYURF
PIGY
HERC3
PDE1C
PAQR4
KREMEN2
CNTLN
TNFRSF9
CAPRIN1
SCG3
UBE2I
SLC16A8
DNAH14
PGBD5
LRRC8B
RPS6
CETN3
HEPN1
ASCL4
AGPS
TARS3
AP3B2
ACSS1
GTF3A
IPMK
CISD1
ZNF131
N4BP2
YIF1A
TMEM151A
PTDSS1
MTERF3
RBM18
MRRF
LAP3
KPNB1
THUMPD3
RAB4A
RPL31
TMEM186
PMM2
CCND2
THOC3
H2BC4
H2AC6
RPL27A
GORASP2
SLC6A11
PPP1R3D
FAM217B
ZDHHC17
SEH1L
U2SURP
AGBL3
TOMM5
TBC1D15
TCHH
KCNT2
FJX1
ORC2
CCL28
GDA
AVPR1A
PIK3R3
ACBD6
SYT14
ESYT3
CDCA7
PIP5KL1
TTI2
RPL21
TEFM
EIF1
EFCAB13
PPIA
SLITRK1
TRDMT1
CBR1
EPB41L5
RSU1
ZNF454
URGCP
CASC3
DCP1B
UBE2D4
LRRC58
PUM2
ANKRD36B
TMEM18
CHEK1
EPCAM
PRG3
GPR150
VENTX
FBXL13
ARMC10
PTPDC1
FZD4
FBXW4
CFDP1
GRIN1
TCTE3
ERMARD
CCNC
MPHOSPH6
NUDT15
EXOSC6
PCDH8
SP8
VSX1
RPP25
PSAT1
H2BC12
H2AC12
PM20D2
OR1E2
XK
MSL2
ZFP62
POLE4
BCAT2
CCDC146
TRPC7
SRSF10
NT5C
CTDP1
ZNF441
ANKRD18A
TOMM20
PTGER4
MGA
ARHGEF5
HENMT1
PSMG1
PLEKHN1
NOC2L
KLHL17
IREB2
H2BC5
H1-4
PBX3
RBM25
GRID2
ADRB1
ERRFI1
ZSCAN31
DDX1
USP4
DIO3
TXNDC15
MTF2
SECISBP2
LUC7L
SLC25A6
HNF4G
UBFD1
EARS2
PSMD3
MOB4
H2BC15
H2AC15
RBM43
H2AC16
H1-5
H3C11
NXPH2
H4C13
GMCL1
POLR3E
CYP2U1
GZF1
ATF4
RCOR3
PMS1
ORMDL1
SKIL
ARID3B
MTRNR2L2
MSH3
DHFR
ID2
ERCC1
SIRT1
MTIF2
SMAD7
FDXACB1
C11orf1
TMEM95
KCTD11
OLFM2
STAM2
SERPINE1
RBPJ
DNAJB2
PPP6R1
RNF103
ANXA8L1
ID1
ID3
TRIB1
MTRNR2L8
PPP1R13L
POLR1G
LPCAT3
GIP
GNB2
FZD5
BIRC7
LRP12
FSTL3
BMPR2
SMAD3
GSDMD
DHRS3
KLF10
NOS3
F2
LAPTM4B
KDM6B
SLC7A5
HOXA3
CCDC88A
EXOC2
EP400
UAP1
H4C4
NDUFAB1
ZNF341
LRRC37A3
ZNF595
ATAD2
MARCHF3
ANXA8
TMEM9
GLIPR1L1
CAPS2
UBE2F
RCL1
MRPL2
KLC4
CLDN14
TUBB
MDC1
ZBTB45
CLTC
PDLIM7
MTHFD1L
VDAC2
RNF213
SLC45A4
USP42
H2BC6
BCAR1
TAF9
RAD17
AK6
LIMS1
PLEC
CALM2
POLR2J3
RHOQ
ATP6V1E2
TBC1D1
DRAP1
C11orf68
NTMT1
TGIF1
SLC7A6
COL7A1
BCAP31
ABCD1
BRWD1
TMEM222
MRPL38
MMP20
SPACA6
OPLAH
AIFM2
BRPF1
DUSP1
ACVR1
PLK3
CAT
LRP6
SREBF1
SPIN1
MDM2
LMNA
SLC44A1
PLEKHA7
LRRC61
RBFOX2
DGAT2
P2RX6
BAMBI
FCRLA
ADAM17
JRK
HPN
PGLYRP4
CFLAR
H2AZ2
TEX46
PLEKHF2
OTUD7B
RWDD1
MFSD10
LURAP1L
RGS3
TBC1D14
PLOD2
GPT2
GPC6
NHLRC1
STK11
ARL6IP1
ST6GALNAC6
HERPUD2
KDM1A
FURIN
ITPK1
TNFRSF12A
CLDN6
SPATA9
RHOBTB3
ETFB
PHETA1
CCNL2
PIK3IP1
NRL
SH2D6
MAN1A2
CANT1
ZFAND2A
LARS2
TRAF7
SNX14
SH3YL1
ACP1
NDE1
MARF1
THOC6
HCFC1R1
BHLHE40
KANK1
PIM1
NFKBIA
AMD1
ARFGEF2
CCPG1
C15orf65
SMAP1
PSPN
ALKBH7
TAGLN2
NOTCH2NLC
PIK3R1
THAP11
NUTF2
MAP3K4
KRAS
CENPT
SERPINB1
CFL1
CDK5RAP2
TNIP1
TLE1
MACC1
SERPIND1
IER3
FLOT1
INHBE
WDFY1
NFE2
SLC39A7
RXRB
ANKS4B
NR1D2
NKIRAS1
EPB41
SKI
RNF19A
SQSTM1
ASIC1
ADAP1
LOC100287896
LIPT2
PUF60
TMC7
SPATA25
BCKDK
MET
LRP5L
ACACA
RNF144A
RNFT1
HPCAL1
CCL16
PRAME
HIBADH
CDK19
S100P
UBE2B
CDKL3
ZBTB38
CYP26A1
RFX1
NEU1
NR4A1
C3orf86
KDM7A
KANSL3
FER1L5
SYNPO
CTSL
NODAL
SLC39A13
SERPINB6
NDST1
SMIM11B
SMIM11A
ARL4A
ASB2
XRRA1
SPCS2
SLC20A1
TUBG1
RETREG3
FOXJ3
MRPL40
HIRA
EDARADD
ATXN7L2
CPT1A
SSBP2
MARCHF7
LZTR1
ZBTB4
SLC35G6
RARA
SEPTIN9
ZNF22
TRMT2A
RANBP1
SARAF
POLR2A
NEURL2
KMT2E
CTSA
GNL2
TUFM
SH2B1
NCOA3
SDC4
KBTBD2
FHL2
LMO7
SEPTIN5
NOTCH2NLA
ZC3H12A
TTC12
NR2F6
SLC6A9
FBF1
RALGDS
KTN1
BRIX1
RRP8
ILK
CDH15
THEM4
OBSL1
INHA
PPP1R3E
DGAT1
USP32
NTAN1
ARL6IP4
INAVA
CCN2
NDRG1
MTX2
EPS15
CCNI
TSPAN10
NPLOC4
ITGAV
MYL12B
GRHL3
SSH1
ADGRG1
FAM107B
MKNK2
MAPKAPK3
CISH
TACC1
HOXD12
RNF11
CCNL1
H6PD
TTC38
BDH1
MLLT6
C15orf39
ATP6V1G1
STX1A
TMTC4
NARF
ACSL3
ST3GAL2
ADK
SLC6A12
GCLM
ESRP2
WWC2
NDUFAF6
KIF13A
ZNF165
PCK2
NCS1
UAP1L1
NCOA5
ZNF367
ARL5A
OSBPL6
TSKU
ARL8B
EPHX1
DIP2A
NCKAP1
AXDND1
TBL1XR1
PRMT3
H4C5
THUMPD1
SLC25A45
OPRL1
LKAAEAR1
FRMD8
TRIB3
AKAP1
DPY19L4
ZP3
GP1BB
ANKRD46
CMIP
LYL1
SAMD11
H3-3A
ITGAE
DCK
SLC16A1
NUB1
FST
FASN
MAPK13
CLTB
KLHL18
KIF9
SCT
CDHR5
DNAJB3
APOC1
UBE3C
DHRS13
ZNF592
ZNF697
MAF1
SULT1A4
SULT1A3
NBN
SYNRG
LRP5
CPPED1
BAIAP2
IRF2BP2
DNAJB12