ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX096354 | LS-180
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◣ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

CCDC200
HOXB3
HOXB4
DUT
GLYATL1
OR10V1
UBR2
C20orf204
IZUMO3
CXCL9
ART3
DPP4
LRRC19
FABP7
TFAP2A
NFKBIZ
HOXB9
HOXB8
HOXB7
WDR74
STX5
SLC30A10
PLS1
HOXA3
HOXA4
HOXA6
HOXA5
CERK
AP1M1
C1orf100
ARL14
FCAMR
CDK5RAP3
PRR15L
PLAUR
DESI2
MGAM
MUC12
PHLPP2
SMIM3
ATP8B1
HOXC6
HOXC5
INTS9
HMBOX1
KIAA1217
SFRP2
FHL2
ACVR1B
ABCB1
DTHD1
TMEM107
FLNB
EPRS1
USH1C
OTOG
OR9Q2
REG4
HNF4G
PNLDC1
HOXC4
CHMP5
BAG1
QSOX1
WDR77
ATP5PB
QSER1
FKBP1A
RHBDD3
EWSR1
KMT2A
KRT8
IQGAP2
RAP1GAP2
RHOH
FGFBP1
NPY4R
HOXC8
UGT1A1
CEBPG
AP2S1
ARHGAP35
LAMTOR4
GPR84
DCAF8L1
ZNF91
PDE6A
VSX1
C1GALT1
CDC14A
TBPL1
NPY4R2
CABLES1
EPHB2
LGALS3
GALNT5
ZZEF1
CYB5D2
PRLR
TTC13
TSPAN3
HESX1
APPL1
GINS1
ABHD12
GATA6
LOC102723996
ICOSLG
CREB3L1
UGT2B10
SLC17A4
GUCY2C
STIL
MAVS
PPP1R14C
MICAL2
WASHC1
EAPP
CEACAM5
SPAM1
KIAA2012
SLC25A27
CYP39A1
WHRN
GPA33
DENND1B
SGCB
RARRES1
TRIM2
PRKCZ
CACNA1D
MLEC
GPR160
C17orf78
SPRED2
NWD1
RPUSD4
FAM118B
WBP4
ELF1
MATR3
ZNF169
MGAM2
CDK11A
TMEM87B
KLHL30
NRARP
CLRN3
FUT4
SPATA46
C1orf226
RNASE6
ROCK2
CDK11B
TXNDC8
NPIPB5
NPIPB4
NPIPB3
PKDCC
CDH17
WSB2
RPSAP58
ACAN
SLC2A8
CREB3L3
UGT1A6
SGIP1
RAB6D
SPOCK2
PDE4D
CELA3A
SEMA3C
ANO6
LRRC66
MEP1A
C3orf85
CMPK1
ZBTB45
SLC27A5
C3orf52
ZNF608
FCER1A
ZNRF3
SOAT1
HEXB
TGFBI
USP7
TATDN1
NDUFB9
CYP3A4
MPV17L2
IFI30
SULT2B1
TSPAN8
GEM
RAD54B
FSBP
CASP5
TARDBP
REG1B
IGFN1
SNX30
GOLIM4
SEMA6D
SLC7A13
SMAD5
STK11
PIGR
MYO18B
SRPK2
SLC4A9
SLC6A7
PRSS12
SURF4
APOLD1
ADGRF4
RDX
RGMB
H3C7
H2BC9
ARHGAP17
ZSWIM7
TTC19
ZBTB17
TBL1X
SRGAP2
FAM72A
TNFSF15
ZNF563
TMEM54
ARHGEF10L
MYOF
NXPE2
TSNAXIP1
RANBP10
RNF186
JAML
TACR2
P2RY1
CCDC7
ABLIM1
NEBL
MINDY3
CDR2
OTUD3
CEACAM16
NSMCE1
CMTM2
CMTM1
LAMB3
SIPA1L2
DUS4L-BCAP29
DUS4L
COG5
SLC35A3
THUMPD3
DEK
MORC1
TAPT1
PHYKPL
YAP1
NEU1
AKR1C3
IGFL4
ETV5
TEX19
UTS2R
NPIPB13
NPIPB12
VPS13A
NOS2
RNF183
JMY
PRSS3
PLAAT2
ZBTB38
PIK3R1
DUX4
RNF114
NBPF1
LRRC69
GDA
HHLA2
PMEPA1
ARHGAP45
LRRC31
IL33
MBNL2
ZSWIM5
PTCHD1
GCG
ANO4
PITX3
GBF1
MCTS1
KCNK1
TMEM45B
HOXA9
HOXA7
TAF12
FBXO31
IQGAP1
LDLRAD4
MAP3K14
RNF145
CALB1
RAMP1
SPINK4
TMIGD1
PHF19
PDGFRB
CDX1
PARP16
DNAJC25-GNG10
DNAJC25
SGK3
B3GALT2
SLCO1B7
GALNT11
LENG9
CDC42EP5
PRSS41
PPM1A
GNA14
LIPH
MADD
LRRC18
TNFAIP8
SLC1A1
DSC2
COG1
PLEKHG3
HEPH
JOSD1
CNGA1
NIPAL1
RGS2
HSP90B1
BMP3
ADGB
ERLIN2
MAMDC2
ADD3
TPD52
RABEPK
PPP6C
TJP2
MAB21L4
RIN2
BCL10
TES
KIF16B
UTP3
ZCCHC14
MROH7
MLF1
GJB5
GJB4
ATXN1
CHST7
TMCO3
DCUN1D2
PLBD1
TMEM31
TNFSF11
TMEM186
PMM2
ARHGAP32
EIF4G3
TM4SF4
FAM72C
PRR5L
NSRP1
COMMD9
CLDN12
H3-3B
GALK1
TEKT3
AFF1
SRGAP2C
FAM72B
CELA3B
GDF15
PTPRB
EIF3A
NAPEPLD
SH3D19
EBLN2
TMEM262
SMG7
NPL
HSD17B12
ENGASE
BTNL3
PIK3CA
SRGAP2B
FAM72D
AKNAD1
NNAT
BLCAP
PRDX6
ZKSCAN1
MALRD1
B3GNT5
PPP1R12A
SLC3A1
INAVA
PRDM4
DRD2
MS4A18
CALML4
TRAF5
ST3GAL2
FCSK
SIRT4
MIA3
SCGB1A1
KLK14
TRPC3
SERPIND1
EPC1
MUC20
CD8A
LAMA3
PTPRF
ARNTL
SH2D1B
SCGB1D1
PTPRR
FCMR
ACOX2
PES1
TAOK3
TCN2
MED13
MTRNR2L2
MSH3
DHFR
KRT20
CXCL12
PTCHD4
RTN4
COX16
GPRIN3
RP1L1
VOPP1
PPARG
PDCD6IP
TRIM31
CHST5
RBM25
GALNT1
EPAS1
LOC388282
KIFC3
COX20
CRYM
CYTIP
HPGD
LIMA1
FOXB2
DCP1A
DNASE1
PTK2B
ATP9A
C2orf88
SEC23A
DDHD2
HSD17B4
TMEM61
VANGL1
SLC26A2
SP3
TBC1D30
LILRA6
SLC11A2
SLC2A13
EXPH5
MEIS1
KRT39
WASHC3
SLC25A45
FRMD8
HKDC1
GSN
DHRS3
RAB14
UCK1
MIR1-1HG
MUC3A
TDRD1
CCDC186
CASP4
SLC12A7
LAMC2
ASPH
PDZD8
CDCA7
MTCL1
JAGN1
CIDEC
H3C15
H3C14
H2AC19
H2AC18
CORO1A
KIF26B
GSDMB
USP54
ATE1
USP6NL
TAS2R41
C1QTNF1
EPS8
RGPD6
RGPD8
RGPD5
SLC20A1
PFKP
MRPS10
CGGBP1
CBLB
C3orf38
TMEM212
HNMT
LGALS4
LIMK2
KIF2C
LRIG1
GCNT4
SLC45A4
SLC20A2
FURIN
MAPRE3
STARD3
PPP1R1B
ZADH2
TSHZ1
KLC1
FBXO32
TSPAN12
RNF24
STYXL2
ZBTB7C
RBM47
NGB
SLAMF9
LRRC10B
GSG1
FNBP4
SYTL2
NFE2L3
ZNF3
COPS6
CRYBA4
PDXK
MMP10
DMP1
EIF2AK2
SCAF11
ITGB5
KIAA1549L
PRSS33
ADGRE5
RASA1
B4GALT6
CNBP
GRAMD1A
SH3TC2
ZRANB3
R3HDM1
ZNF282
PAPSS1
MBNL1
APBB2
ETFBKMT
NEURL1B
VDAC2
HEXIM2
FABP1
CDCA8
C1orf109
FKBP9
EXT1
TGFBR3
ST6GALNAC6
ST6GALNAC4
UGT1A8
MAP3K13
CFAP45
TRMT112
PRDX5
ETFB
KLF5
MAPK8IP1
VSIG10L
C4orf36
RABGGTB
MSH4
EBAG9
SIT1
CCDC107
MBP
SOCS6
OR51A2
PPIL3
NIF3L1
DENND1A
IQCF1
ATP6V0D2
CPS1
SRI
PPP2CB
TACC2
HOXC10
DEPP1
HOXC9
ECT2
PIWIL1
RALB
CEBPA
SERPINB1
AKAP7
LNX1
CLOCK
BARX2
ADGRG1
CTXN3
DSG2
TM2D2
ADAM9
TGFBR2
GNAT3
INTS8
PTPN6
C12orf57
MYH4
OR10W1
SPDL1
DLG1
WASHC2A
TUBG2
ARHGAP39
ABR
LRRC4
POU2AF1
WEE2
DENND11
UGT2B17
MEF2C
C19orf33
ATP6V1FNB
BPNT2
VIPR1
MLLT3
INPP1
ATP2B4
SMC2
SLC12A2
NDE1
MARF1
UEVLD
DPEP1
TAF4
SYNPR
CHMP3
NSFL1C
DACH1
MMP1
ANKRD40CL
CAST
LOC389831
ACSF2
TEP1
PPARGC1A
GGH
CRYBG1
CLIC4
FBXO48
APLF
GDPD5
NOS1AP
CBFA2T2
RASSF8
MALL
MYO7B
IWS1
CYP4A11
TDGF1
PYGB
LRRN3
PRKAB2
CHD1L
PMVK
TM9SF3
DIAPH3
LMOD3
MUC13
SULT1C2
EIF3E
ITPK1
ZMPSTE24
RUBCNL
WWC1
SLC25A13
MED11
ELAPOR2
TESC
HDHD3
KLHL13
GUK1
FRMD3
MYO15B
CTTNBP2NL
PHLDA3
NOTCH1
RNF103
MTURN
FNTA
VAV3
MTHFD1L
TNIK
TMEM174
TMEM205
RAB3D
CCDC159
CXCL5
SCYL3
TRIB1
RAPGEF6
LARGE1
SGO2
PCCA
ABHD2
CYTH1
NXPE1
CPLX2
ARHGEF38
PLA2G6
LDLR
CCDC196
MLIP
YWHAZ
HINT1
INPP4B
PIF1
VWA2
ABAT
RBCK1
ARHGAP27
ADGRG7
TACC1
TMEM270
METTL27
SPINDOC
TENT5C
CPSF4L
FERMT1
PKP2
DUSP18
HACD2
CXCL2
AHCYL2
FAM131B
SLC13A1
PRAG1
RGS8
HEPHL1
ATL2
LAMB1
CCNJL
CYP3A5
NEURL3
ALDH3A2
MYBBP1A
GGT6
LRRC61
ACTR3C
MYRF
DOCK10
CACHD1
NFIL3
NCAPD2
MRPL51
GNPAT
C1orf131
COL21A1
TGIF1
SMCHD1
EPHX2
CHRNA2
BRMS1
B4GAT1
LPIN1
FAM114A1
TXNRD1
FOXN3
PPP1R3A
SLC9A3
SUSD1
DNAJC1
OR10H1
OTULINL
ANTXR2
NUMA1
LRTOMT
ICA1
SOX4
AMACR
NUDC
NR0B2
RNF31
PSME2
EMC9
WWC3
IRF2BP2
PSME1
ANXA11
ZNF226
MTUS1
AGFG1
SEMA5A
VPS52
RPS18
B3GALT4
RUNDC1
PTGES3L-AARSD1
PTGES3L
FBN2
PPIL1
C6orf89
HOOK1
RASGRF2
TRIM27
SPO11
H4C11
H4C12
H2BC15
H2AC15
TAS2R46
SULT1A1
FAM106A
NPIPB8
KCNQ1
LRIG3
FARSB
FAM135A
IBTK
LASP1
HSPG2
AHNAK2
TMEM170A
SHH
SYBU
PLEKHG1
ATP10B
MBIP
SLC14A2
UBE2J1
B3GALT5
ASAP2
DCAF6
FAM177A1
SPATA2
OIP5
NUSAP1
ZNF484
PHF8
HK2
TMEM265
PHKG2
BATF
DNAH8
PABPC4
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
NCOA7
MAP3K5
TTI2
FGF1
BTBD3
ARHGAP21
SQOR
CXCL8
HOXC11
TMEM200A
SAMD3
SHROOM1
CLNK
MGLL
STOM
SDF4
B3GALT6
TCIM
TPM4
LRP1
PCED1B
AMIGO2
FOXP1
EPN1
PIK3R2
GSKIP
ATG2B
WDR36
SMIM14
RAPGEF5
OR9Q1
OR6Q1
AHR
KRT36
KRT35
SLC7A6
LYSMD3
EIF3F
MLPH
SORL1
OTUB2
NPAS2
MRO
GSDMA
HSD3B1
C6orf132
SLC22A2
ELF3
SOX30
C5orf52
CA1
ME3
TMEM62
SMG1
CLTB
GSTK1
TIPIN
SCML4
CLGN
PAX8
PHACTR4
SYF2
MTFP1
EPHA6
ARHGDIB
DUSP6
MAPK3
GDPD3
MBD2
UHRF1
ANXA10
ACTR3
ZNF552
KRT16
BCAP29
CAMK2G
MTMR9
KCNIP3
VWA3B
KLRC2
IL20RB
IL34
TMEM106C
MACC1
PKIB
INSIG2
FOXJ3
MYADM
RPS6KA1
SH3BP4
FAM13B
TOR1B
TDRD7
SYNE3
DNMBP
FCGBP
BAHCC1
SVOPL
RHOB
TPMT
KDM1B
PDE5A
PADI3
RFLNA
GADD45A
ROS1
SMIM31
TNFRSF10A
FHL1
TMPRSS4
SMIM35
BMP2K
FRAT2
FRAT1
BCAT1
LOC102723360
SVIL
NPSR1
NDUFV3
CPA6
LOC102724951