ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026263 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◣ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
NPY4R
NPY4R2
ZNF76
RBBP8NL
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
CHI3L1
GPR84
C20orf204
KCNE3
NEK2
PKDCC
CYP2R1
OR10V1
HK1
CEBPG
COL23A1
ACVR1B
HES1
CTSK
SALL4
COG1
RARB
TOMM40L
APOA2
FCER1G
KRT8
TMEM262
GFOD2
CD300LF
EML1
HOXB3
HOXB4
AKAP9
WDR74
STX5
NFAT5
JOSD1
HOXA3
SLCO2B1
RGPD2
RGPD1
ZNF341
NAV2
SERINC3
PKIG
MRPL44
CYTH3
MACC1
KRTAP3-2
KRTAP3-1
DUX4
PTCD1
CPSF4
STX16
ZNF503
ALG10B
ZNRF3
TSPAN3
TPK1
CD244
CREB3L1
XPR1
AP1M1
AJUBA
USH1C
OTOG
MRPL21
IGHMBP2
AFAP1
SULT2B1
APOLD1
EPB41L1
PMEPA1
LCT
GLYATL1
ARHGEF12
STARD10
ART1
MARCHF8
BAMBI
ZNF169
ZBTB45
SLC27A5
CDK5RAP3
PRR15L
PRELID3B
SLC12A3
CA4
HEXB
GNPAT
C1orf131
MYEOV
ISX
COL4A2
COL4A1
IL9
FAM111A
LECT2
PDGFRB
CDX1
STAT3
RHEBL1
KMT2D
STAT1
ADARB1
RGS19
OPRL1
LKAAEAR1
MEP1A
ID1
HEG1
BMF
HKDC1
PHRF1
SMIM3
PTPRN2
LRP2
GRAMD1A
LRIG3
TATDN3
NSL1
C1orf100
ANKRD40CL
RDX
S100A2
MALRD1
TDRD7
ALG10
CCT5
ATPSCKMT
MMP8
PDZRN3
CAPRIN2
KDM2B
GATA6
SLC2A8
ZMIZ1
HOXC6
HOXC5
DCAF6
ATF3
CDR2
NAALAD2
TAGLN2
FKBP1A
STX18
ZBTB38
MKRN2OS
MKRN2
RFFL
ADGRG7
CASC3
SLA
MGAM
NDUFS7
FRG2
WWC2
CHST7
ETFB
RALB
NUF2
ITLN2
B3GNT6
MOB4
TSPAN32
C11orf21
SPATS2L
LDHAL6A
TNFAIP8
NCOA5
KRAS
ANO6
C2orf88
ZFP62
BMPR1B
DDX23
LGALS3
HOXB5
ATXN1
TACR2
H4C11
H4C12
H2BC15
H2AC15
MORC1
EPCAM
ADNP
MATR3
ATE1
WWC1
UBB
DPP4
NTF3
H3C15
H3C14
H2AC19
H2AC18
CDK5RAP1
OSBPL1A
H4C15
H4C14
TUT1
MTA2
OR10AD1
PTPN6
C12orf57
BCL2L1
TOP3B
LIFR
COL5A2
TFPT
PRPF31
INTS5
GANAB
DDX59
MICAL2
MAGEA11
ADAP1
SKIL
GSTP1
AMACR
WASHC2A
CTSB
EIF3D
KAT6A
MRPS31
CCDC90B
REG4
EPHB2
RNPEP
TOB1
TMEM230
PCNA
VILL
ANKRD1
MAMDC2
FGG
SPOCK2
RAB3C
BANF2
GSG1
MRPS23
SPATA2
OR9Q2
LAMB3
POLDIP3
BCAS4
PRSS23
USP54
SLC33A1
IL1R1
ALS2
IL37
HERPUD1
PERCC1
ANKDD1B
AP3S2
PRSS41
CAPN2
TACO1
USP30
S100A10
TULP4
CFLAR
SLC7A5
HSPB3
PPP1R2
QSOX1
TMC7
DRD4
NOTCH2
PLEKHG3
GSTO1
RHOH
LAPTM4B
MTRNR2L1
YAP1
GTPBP4
CALM2
TRIP4
PCLAF
SLC41A3
ALKBH3
C4BPB
ATP5F1E
NXPH2
OSGIN1
GIP
SMG7
SNTB1
PHLDB2
UBE2V2
SBK3
TXNDC2
GTPBP6
FEM1A
PRR5
TSPAN13
ADAT1
GBA
PHF12
GARS1
BTNL8
NQO2
MUC3A
SLC7A6
ZNF226
ZC3H6
VPS9D1
ENTPD4
SIX1
ALDH5A1
TBL1X
SEBOX
TYMSOS
TYMS
GPBP1
LAMA5
VTN
SARM1
NRCAM
NAGLU
GAB1
INTS9
HMBOX1
WSB2
NFE2L2
ATP8B1
HEXIM2
EAPP
MTRNR2L8
ZC3H10
ESYT1
RPL41
CLTB
EPRS1
DCP1A
KPNB1
IKZF3
PNLDC1
PHYKPL
CEBPA
PPP1R14A
REG3A
OGT
ZBTB7B
LENEP
TOB2
GTF2H2C
GTF2H2
CLDN9
CLDN6
INAVA
STK32C
LRRC27
P4HA1
LRP6
NDUFAF5
ESF1
SLC25A44
SP2
SYNRG
COL21A1
SLC2A9
USPL1
HMGB1
INTS12
GSTCD
KANSL3
FER1L5
ZNRF1
WDR59
DPY19L4
PHIP
CRBN
ZC3H15
TTI2
PDZK1
CD160
NNMT
OTUD7B
ZKSCAN2
TMPRSS4
SMIM35
SLC4A8
TSSC4
BBS1
GTF2H2C_2
GALNT6
ADPGK
FCRLA
PRRT2
MAZ
TSFM
ARHGAP45
SNX5
MGME1
DOCK6
NUDC
NR0B2
TGFBR2
BIN1
FBXL17
BTNL9
TBX4
SELENOH
ASXL1
AFG1L
H2BC14
H2AC14
XPA
UBE2Z
CLDN18
FABP7
PRSS33
TM9SF4
MARCHF7
PCID2
CUL4A
GFRAL
CLNS1A
MIA3
NDUFV1
SLC19A3
CCDC88A
ANKFN1
IRF2BP1
MCM7
AP4M1
EIF4H
RTN1
CIAO3
SP5
BANP
MPZL3
LRMDA
ELF3
LYPD6B
CCAR2
C8orf58
HNF4A
SLC20A2
SMIM19
CCNDBP1
PEX3
ADAT2
RAD51AP1
GZF1
C12orf4
PTEN
KLLN
JAML
GPATCH1
PDE6A
CYCS
CKAP5
CHMP3
GTF2IRD2
ZNF335
PLCB1
INTS4
ACOX2
OGA
SIRT1
RAB18
TMEM248
SUPT5H
RPS16
TSN
FGD3
PMS1
ORMDL1
UBR2
TMEM60
PHTF2
FAM91A1
IST1
MRPS33
BCAS1
PTPN4
CALM1
COX16
ZW10
CLDN25
KMT5B
ERMN
SCGB1A1
SELENOW
C6orf226
KRT18
BCAP29
SRSF6
TMEM229B
PLEKHH1
GTF2IRD2B
FRG2C
LOC102724770
DGCR6
HOXA4
ABCB1
HOXA6
HOXA5
DUT
RHBDD3
EWSR1
HOXB9
ABR
LRRC4
NFKBIZ
HOXB8
HOXB7
ARL14
CXCL9
ART3
DESI2
AGMO
TOR1B
PLAUR
WBP4
ELF1
PITX3
GBF1
HOXC4
CCDC200
RIN2
SF3B4
MTMR11
RGMB
SLC30A10
GUCY2C
TRIM2
SFRP2
EEF1A1
HOXC8
PRLR
CEACAM5
CERK
LRRC19
C1GALT1
POU5F1B
PHYHIPL
IGSF23
SOX2
LRRC69
KIAA2012
PRICKLE1
GPR160
GINS1
SPATA46
C1orf226
PLS1
PLRG1
THUMPD3
CDH17
MEIS1
FOLH1B
KLF4
UGT1A1
HNF4G
TMEM107
ABHD12
SI
ST3GAL2
FCSK
C17orf78
TFAP2A
FGB
RNASE6
DEPDC7
ARHGAP32
FAM72C
SRGAP2B
FAM72D
LUC7L3
PCED1B
AMIGO2
TATDN1
NDUFB9
FAM20A
SYBU
CNGA1
FCAMR
MTCL1
PAPSS1
PKP2
FBXO31
FHL2
PLEKHM3
PHLPP2
CAST
PI3
PAM
SLC20A1
DNAJC25-GNG10
DNAJC25
RAMP1
NAA20
CEACAM16
PIGR
SLC6A7
SLC12A2
IL34
GOLIM4
YWHAZ
CACNA1D
NAPEPLD
SMAD5
POTEJ
CFC1
ZNF91
DUSP18
NIPAL1
IZUMO3
LOC102723996
ICOSLG
ALDH3A2
SPAM1
LAMA3
SMIM10L1
PRH1-TAS2R14
COX5A
PIK3R1
SERPINB1
RTN4
C3orf52
STIL
GYS2
CLRN3
AP2S1
TMEM106C
H3C7
H2BC9
CDC14A
TGIF1
SLC25A27
CYP39A1
TTC13
PRKG2
DCAF8L1
TMEM45B
TBPL1
CHST5
PTCHD1
SRGAP2
FAM72A
ZNF608
TSPAN8
LRRC66
KMT2E
QSER1
MGAT4A
TMIGD1
RGS2
ADD3
NOS2
AFF1
GPA33
ARHGAP35
HOXC10
EIF4G3
HNMT
POU5F1
RAB6D
GCG
PTH
EPAS1
DTHD1
GALNT11
HAND1
MAP3K14
CABLES1
SOAT1
SLC1A1
KIAA1217
SPRED2
TNFSF15
GCNT4
NSMCE1
DEPP1
TRPC3
TMEM38B
ATP9A
PFKP
FGFBP1
FLNB
TSNAXIP1
RANBP10
RNF32
TMEM242
PDE4D
FUT4
MPV17L2
DENND1B
AKNAD1
GRAMD2B
TES
HEPH
WDR77
ATP5PB
LOC388282
KIFC3
WNT5A
LAMTOR4
CLDN12
HOXC9
OLFML2A
NR6A1
B3GNT5
MLEC
RHOBTB1
SIPA1L2
RNF114
TMCO3
DCUN1D2
TMEM170A
NBPF1
MS4A18
RNF145
SEH1L
UGT1A6
PLEKHG1
ITPK1
SLC45A4
TMEM141
TDRD1
FCMR
CCDC186
CCDC183
MYOF
LRRC18
ANK3
CCDC7
SIRT4
MAPK10
GALNT5
COBLL1
ATP10B
VIL1
UGT2B10
SLC26A2
SH3D19
MAVS
DNASE1
RBM47
CHMP5
BAG1
SERPIND1
MYRF
RPUSD4
FAM118B
GGT1
RBM25
FAR1
CFAP221
TGFBI
WHRN
MUC12
ST6GALNAC6
ST6GALNAC4
GSDMB
MGLL
ZNF563
IGFL4
GSN
PTP4A1
DHRS3
EHBP1
AKAP7
ZZEF1
CYB5D2
GATM
IQGAP2
VSX1
NR5A2
FNTA
CELA3A
HEPACAM2
DUS4L-BCAP29
DUS4L
COG5
MBNL1
PES1
GEM
FCER1A
HSD17B4
DOCK10
TFEC
NRARP
ARHGAP17
CDK11A
FAM53B
TOE1
MUTYH
JMY
CASP4
SCGB1D1
HACD2
GGH
ZNF3
COPS6
ETV5
MTUS1
KCNIP2
SURF4
PTPRF
ANXA4
ABLIM1
LNX1
SGK3
BTG1
SNX30
FABP1
ACTR3
HSD17B12
DEK
TMEM69
GPBP1L1
KIF16B
RNF43
PGP
E4F1
SLC17A4
INTS8
SEMA3C
RTN3
ATL3
ZSWIM7
TTC19
SELENON
ERLIN2
ROCK2
MPP6
PRKCZ
TMEM87B
ADGRE5
NXPE1
CPS1
STAM2
PPP1R12A
SPINK1
MGAM2
CXCL5
MALL
SAR1B
MYO18B
RNF183
PISD
SCT
IRF7
CDHR5
MRPS16
MRPS10
FAM177A1
SEC23A
MAP1LC3B
IFRD1
RGS9BP
ANKRD27
WDR89
USP7
IFI30
CLDN4
NHS
NNAT
HESX1
BLCAP
APPL1
RAP1GAP2
STK11
SMCHD1
SLC22A2
ERVMER34-1
TAF12
KIF5C
LGALS4
CCDC59
P2RY1
TARDBP
RAB5B
PMEL
MCTS1
CDK2
FAM107B
MROH7
TSPAN12
WASHC1
RHOBTB2
TXNRD1
HOXC11
TAS2R46
EPHX2
CHRNA2
KRTAP9-1
CGGBP1
PYROXD1
CXCL2
RAB14
POMT2
GSTZ1
LMO7
KLHL8
CMPK1
TEX19
NXPE2
CDX2
JMJD1C
TM4SF4
PPM1L
FOXN3
FKBP4
SFR1
COX20
PKIB
PIK3C2A
TLE3
SLC25A13
RBCK1
MLLT3
IQGAP1
C3orf85
SLC35A3
RARRES1
NEU1
NWD1
LIPH
PPIL3
NIF3L1
MBNL2
KRT19
CYP2W1
COX19
PPARG
MIDEAS
ADGRF4
CRYBA4
SRGAP2C
FAM72B
CDK11B
VPS13A
KRTAP4-2
KRTAP4-1
CDON
LYSMD3
RMDN2
EPC1
JAGN1
CIDEC
TMEM54
SCYL3
RIC8B
PAK1
PDXDC1
TXNDC8
TESK2
REG1B
MMACHC
CCDC163
PDE4DIP
ZHX3
KRT39
EPS8
WFDC9
WFDC10A
ARHGEF10L
TAOK3
DLX4
VAV3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HINT1
SLC38A1
RABEPK
CASP5
WDR36
UQCRB
MED11
INSIG2
HPDL
SRPK2
SOX30
C5orf52
NECTIN1
KLHL30
UTP3
TPD52
PSMD3
IKZF2
DDHD2