ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
NPY4R
NPY4R2
RBBP8NL
HOXB4
HOXB3
OR10V1
ABR
ZNF76
CYP2R1
CEBPG
PKDCC
COG1
C20orf204
PLRG1
FGB
ACVR1B
SPOCK2
RALB
TSPAN3
HOXA3
ISX
GATA6
CREB3L1
HES1
KCNE3
PCED1B
AMIGO2
CD300LF
ANKRD40CL
STX16
C1orf100
GRAMD1A
ID1
PRR15L
CDK5RAP3
HSPE1-MOB4
HSPE1
HSPD1
JOSD1
RDX
ZNF143
MGAM
WSB2
GPR84
MYEOV
NEK2
KRTAP3-2
KRTAP3-1
USH1C
OTOG
IGSF23
PPP1R14A
RARB
PRSS41
TACR2
HKDC1
CA4
CD244
HK1
RNPEP
KRT8
LRRC69
LRRC59
MAGEA11
NTF3
TOMM40L
APOA2
FCER1G
ITLN2
TNFAIP8
PLAUR
NT5DC4
PMEPA1
SMIM3
PDGFRB
CDX1
STARD10
CHST7
CDK5RAP1
MAPK10
EML1
TCF20
PRICKLE1
GSTP1
HOXC6
HOXC5
ATXN1
CHI3L1
GNPAT
C1orf131
DCAF6
EPRS1
ZBTB38
TMEM106C
ARHGEF12
TBX4
SLC2A8
SLC6A7
RTN1
SULT2B1
FKBP1A
INTS9
HMBOX1
PI3
RGS9BP
ANKRD27
MORC1
GUCY2C
PADI2
TDRD7
ZBTB45
SLC27A5
ZMIZ1
TMEM262
ZNF501
MRPL44
USP54
STX1A
MALRD1
MICAL2
PIGR
SCT
IRF7
CDHR5
GPR171
SLC45A4
HOXC4
HOXC8
CEACAM5
NAV2
PLEKHG3
PIK3AP1
RHOH
MEP1A
SLCO2B1
KRAS
CERK
PTCD1
CPSF4
EPAS1
FGG
PLEKHM3
CCDC90B
STAT3
JAML
PRLR
KRTAP9-1
KRTAP4-2
KRTAP4-1
ZNF117
ERV3-1-ZNF117
ERV3-1
GLYATL1
CASC3
ATF3
RGS2
NUF2
ADAP1
TOR1B
OR9Q2
REG3A
COL21A1
ATP10B
THUMPD3
ADNP
FAM111A
ZNF226
UBR2
CXCL2
ABCB1
RBM47
TUT1
MTA2
KCTD5
C1GALT1
MUC3A
WWC2
METTL15
KIF18A
SYBU
DNASE1
RIN2
SPATA46
C1orf226
HOXC10
HAND1
HOXC11
WFDC9
WFDC10A
BCAS1
POMT2
GSTZ1
PTCHD1
GFOD2
PNLDC1
STAT1
TATDN3
NSL1
TEFM
APOLD1
ASB2
PSMB5
LECT2
PIK3C2A
EPHB2
DEPP1
GTPBP6
NNMT
NCOA5
FBXO31
IL34
MAP1LC3B
SFRP2
ZSCAN9
TMEM109
PRPF19
LCT
LRP2
ZNF169
HERPUD1
PAK1
PFKP
ALG10
ZNF512B
ZGPAT
SAMD10
ARFRP1
ZNRF3
AKR1E2
OR6V1
RFLNA
PLXNC1
MRPS23
DUSP18
SPOP
GPA33
MYRF
MRPS16
DNAJC9
ARL14
GRAMD2B
NFAT5
AJUBA
PRELID3B
SYCP2
PPP1R3D
FAM217B
HOXB9
REG4
MIDEAS
BHLHE40
HNF4A
C3orf52
C2orf88
SLC35D2
ITPK1
MIA3
CEACAM16
CNNM3
TRIM2
NECTIN4
COL23A1
TMPRSS4
SMIM35
SLC12A3
EPCAM
SLA
ZNF552
NR5A2
GBA
SMTN
ACOX2
INTS4
TESK2
MMACHC
CCDC163
MOGS
MRPL53
AFF1
TMEM248
GINS1
ABHD12
CALM2
SPRED2
ELF3
MRPL21
IGHMBP2
RHEBL1
KMT2D
STAT6
SLC30A10
TOB1
PRSS33
GALNT11
SLC17A9
CEBPA
TFEC
B3GNT6
BBS1
TM9SF4
TATDN1
NDUFB9
YWHAB
WDFY1
THAP1
CFAP69
TRMT61B
ATE1
PAPSS1
BCL2L1
CHPT1
MACC1
PEX3
ADAT2
EDN3
TFPT
PRPF31
BANP
EIF4G3
CCT5
ATPSCKMT
WDR36
ERICH5
CTNNBL1
SLC20A1
WWC1
DCP1A
CTSK
PDE6A
COX5A
CCNL1
SLCO4A1
ZNF530
POTEI
CFC1B
ALG10B
MT1F
MT1B
HIBADH
SCN1B
HPN
SMG7
ZNF3
COPS6
H4C12
H4C11
H2BC15
H2AC15
ANKDD1B
USP30
NPAS4
UQCC3
UBXN1
LBHD1
ZFYVE26
RAD51B
CDH18
NOS2
MARK2
PGP
E4F1
ADARB1
S100A2
RIC8B
TMEM126B
DLG2
TMEM60
PHTF2
BCAS4
KPNB1
RBBP5
GCNT4
FCRLA
DUX4
MGAT4A
HEPH
RAB3C
VSIR
SLC30A4
GSDMB
FAM107B
TPX2
IQSEC3
PTPRF
URGCP
URGCP-MRPS24
SLC25A44
RGPD2
RGPD1
LRRC4
KCNIP2
CAPN5
DDX23
CHST3
HEXB
TMEM69
GPBP1L1
SOX30
C5orf52
PRRT2
MAZ
ZNF341
PIGZ
TARBP2
NPFF
MAP3K12
HOXB5
CFAP221
ARHGAP32
MRPL3
IL1R1
UBB
ZNF513
SNX17
EIF2B4
CRLS1
RNF114
VILL
SNTB1
ACOT1
NSMCE1
EMP1
POTEJ
CFC1
DNAAF2
PITPNM1
CAPN2
SLC51B
CXCL5
VAV3
PRKAG2
COL12A1
TLCD1
RPL23A
RAB34
PROCA1
NEK8
KMT2E
PCK1
NDUFS7
SDHAF3
VIPAS39
AHSA1
GYS2
DCAF8L1
CHMP3
DAGLB
SEMA7A
ARHGEF18
MUS81
CFL1
NPIPB15
MRPS10
ANK3
ZNF248
CRYBA4
ALKBH3
MRPS14
SPAM1
BMF
PRPF18
PPIP5K2
GIN1
EIF3F
BAHCC1
CCND1
TTBK2
RRN3
RPS7
NCOA3
ARHGDIB
SAMD5
AKNAD1
EPS8
LDHAL6A
TSR3
GNPTG
SIPA1L2
KIF3B
LGALS4
ACIN1
DLX4
TOB2
KBTBD8
PPIAL4F
PPIAL4E
PPIAL4D
PGF
G3BP1
TMEM38B
TMEM141
CCDC183
DENND1A
ZNF721
PIGG
ZNF770
PLD3
C19orf47
AP3B1
HERPUD2
ZNF207
SLC18A1
C17orf75
CDR2
SIRT4
SLC33A1
LRIG3
CDX2
SEBOX
URAD
TUFT1
TMEM199
SQSTM1
POLDIP2
DTX4
NFKBIZ
COX16
BCL9
CFAP20
POLR2J2
PLEKHG6
NR1H3
DDI1
ACP2
HACD2
KIF5B
DYNLT3
CARD16
MYBL2
EPB41L1
MARCHF8
MAST2
MRTFA
JMJD1C
TNFAIP1
IFT20
RNF7
GTF2H2C
GTF2H2
MBL2
CXXC5
C1orf116
SLC12A2
S100A10
RNF32
CARD10
FRA10AC1
MPZL3
SREK1IP1
SCAND1
SC5D
CWC27
LMO7
ARHGAP27
PAX8
COG3
CHKA
PGAP3
INTS6
ERBB2
ATXN2L
PTH
TMCO3
DCUN1D2
CASP4
TACO1
UBAP2L
C1orf43
PDPR
MCF2L
TNFSF15
ARHGAP45
CCDC59
NUGGC
ELP3
FXYD2
ZSCAN32
ZNF174
NODAL
FABP1
KRT19
MANSC1
BORCS5
SNX19
KRT15
ANKRD33
KIAA2012
IRAG1
TBRG1
PIGU
CHST5
SH3D19
SAR1B
TFRC
COL5A2
HOXC9
IFRD1
MOB4
MMP15
H4C4
H3C4
H2BC6
TBL1X
ST6GALNAC6
ST6GALNAC4
ATP2B4
IRF2BP2
RAPGEFL1
PITX2
NDUFC2-KCTD14
NDUFC2
FUT2
AGT
FASTKD1
TAS2R19
SF3B2
GAL3ST3
TMC7
GSTO1
TMEM123
RNASE6
RAB6D
GATM
TSPAN32
C11orf21
SLC25A16
ART1
NR1D1
ARIH1
SRGAP1
SERPINB1
YAP1
GTPBP4
MYL6B
MYL6
EPC2
FAM20A
LUC7L3
ZHX3
CKAP5
RPL37
RANBP2
CTDP1
CARD6
LOC102723996
ICOSLG
INPP1
ZNF384
TTC13
NECTIN1
CLIC5
TMEM242
BUD13
HPS6
ARMH3
TEX46
SH3RF2
PRRC2C
KDM1A
CPNE6
TSPAN8
POLD4
GULP1
PKP4
CCDC148
OGDHL
KBTBD7
AKAP9
ANXA4
ZFP62
SLC3A2
ZFHX3
SNRPC
SIN3A
PBLD
HNRNPH3
DGCR6L
MTRNR2L1
ZNRF1
WDR59
TMEM167B
KDM5B
INTS5
GANAB
SIX1
KRR1
DOCK6
LYPD6B
ZCCHC8
SCNN1A
LTBR
SUPT7L
SLC4A1AP
GSK3A
ADGRE5
ZFP36L1
ENPP3
RPS5
MTF2
ZSWIM1
SPATA25
NEURL2
MED23
CTSA
C11orf65
GPATCH1
TSSC4
CPHXL
LAMB3
ACHE
USPL1
HMGB1
SURF6
FAM227B
DTWD1
CALML4
TSEN15
ABT1
ZNF510
SP2
SMUG1
SMARCD1
RALGAPB
PPIAL4C
NOL4L
ASIC1
CPLX2
MBTPS2
NXPH2
SPIB
SMIM30
SCAF1
RRAS
PLIN2
TULP4
EHBP1
ADGRG1
FOCAD
WDR89
STK31
SLC7A5
TEAD4
SLC25A36
ITIH2
AAR2
CDC14A
RNF145
ABCC3
MRPS33
LIPE
FABP7
LIMA1
PDZK1
CD160
LTN1
ZNF91
RAB5B
PMEL
CDK2
INTS12
GSTCD
CLPB
DENND4A
ARFGAP1
TMEM107
MATR3
CTSB
PPIL1
C6orf89
DAGLA
ZFP36L2
SLC30A6
RNF44
PSENEN
PROSER3
NCBP3
MRPL2
LIN37
KLC4
HSPB6
DSTYK
CUL7
CDHR2
ANKRD13D
ATP8B1
SPINT1
WDR97
MTG1
MAF1
HAVCR1
FANCD2
CYC1
HSD17B4
LASP1
KIFBP
TRIB3
ZNF746
STT3A
PRKG1
PDE6D
NMNAT1
LZIC
COPS7B
CHCHD3
BLOC1S6
ARL8B
ZNF503
ARHGEF28
AGR2
MITD1
ZNF749
SV2A
POFUT1
PLAGL2
BOLA1
SELENON
AQP11
SDC4
LGALS3
IGFL4
RBM25
CLDN12
RTTN
TYMSOS
TYMS
DPY19L4
VTA1
SLC29A4
PGLYRP1
NMBR
HOOK2
EXD2
PHYKPL
MROH7
PTP4A1
FURIN
CCDC88A
TM4SF1
EFNA1
SLC50A1
GTF3C3
C2orf66
NAA20
GCG
TRPC3
OGT
UGT8
FGF1
SYMPK
FOXA3
WDPCP
MDH1
PRORP
PPP2R3C
NAGK
ATP9A
CEP126
ANGPTL5
ZNF789
ATP5MF-PTCD1
ATP5MF
UBE2V2
SLC46A1
PTDSS2
OTUD6B
ANO9
IDH1
TJP3
ASMTL
ADAMTS9
CRBN
PRDM11
PTEN
KLLN
SF3B5
RCE1
LHPP
HEPACAM2
OR10AD1
WDR91
NEK10
SELENOP
RPS3A
VPS50
PPP1R35
HTR3B
DIDO1
DEXI
CLEC16A
PLEKHG1
RTN3
ATL3
CDC42BPA
OPA1
CYCS
PDP2
NRBF2
FBXO46
DMAP1
BAX
VIL1
SLC25A13
FAM131B
PPIL3
NIF3L1
TTLL6
GTF2H2C_2
KLB
RAB5IF
PECAM1
FITM2
DESI2
SERPIND1
PDSS2
EPHA10
POLR2J3
GTF2IRD2B
PSAP
CDKN1B
NUDC
NR0B2
RPP25L
DCTN3
ARID3C
RHEB
PPIAL4H
PDXK
A2M
ZNF212
TYRO3
STMN3
RTEL1
HNF4G
ZNF337
ZBTB11
RPL24
MPIG6B
LY6G6F-LY6G6D
LY6G6F
LY6G6D
LY6G6C
AGPAT2
OPTN
CCDC3
ETV4
SPRING1
RNFT2
ARID4A
ZC3H15
NOSTRIN
ABCB9
OGFOD2
ARL6IP4
OIP5
NUSAP1
ZNF577
TMEM97
RAG2
IFTAP
CXCL9
ART3
GALNT5
FNIP2
ZW10
CLDN25
ZSWIM3
ACOT8
NR4A2
TTC36
TMEM25
PPP1R12C
PLA2G1B
CUBN
CREBL2
CAMKV
HOOK1
RSAD1
OVOL1
MTIF2
FGFR4
EIF1AD
CST6
CLTC
CHAD
BANF1
AP5B1
JAGN1
CIDEC
OTUD7B
TMED5
SPDYE14
SPDYE10P
SHANK2
SEMA4G
CCDC18
CASTOR2
QSOX1