ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475367 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◣ SRX10475367: Hep G2

◢ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
INSM2
HTR5A
MTRNR2L2
CPLX2
RAB37
CELSR3
CHGB
RANBP3
GLRA1
SNAP25
L1CAM
MTRNR2L8
BARHL1
EPHA10
SST
MAPK8IP2
LHFPL5
KDM3A
DNAJC6
CDIP1
HES3
LEMD3
PTPRS
N6AMT1
SLC7A6OS
PRMT7
CCDC92B
CCNL1
ENOSF1
GCFC2
IKZF3
RNF130
MARCHF4
SLC12A5
HES6
GDAP1L1
NPPB
VGF
CPQ
AATF
USP14
NTSR2
SRRM3
PIK3R3
EVI5
CYB5R4
HBQ1
PTPRN
POLR2J3
TRIM44
H4C12
PMS2
AIMP2
WTAP
SOD2
UNC80
KLF11
GTF3C3
CHRM4
SLC25A10
STX16
EIF3B
CEP295
RMND5A
EPM2A
CHGA
GJA10
GRM1
EXOSC6
OGDHL
CERS6
NSUN5
CISD1
LMCD1
DDX1
ANKRD36
STK25
NRSN1
HDAC4
CHRNB2
ABCC6
ZFYVE27
SCRT2
RAD50
DPY19L4
CNPY3
LDAH
WDR74
STMN3
RABGGTA
RFC1
HPCA
PPP1R3C
SLC39A3
TCFL5
TIGD1
EIF4E2
SP5
CMTR2
ANK1
AKAP10
HECTD1
PMVK
MFF
TENT4A
SF3A3
ACTL6B
AAR2
PGBD5
KATNA1
SLC3A2
TCAIM
ALKBH2
SCGN
CNTRL
C5
UBE2Q1
DTD2
SVOP
LRRC59
FAM177A1
AARS2
KAT5
DHX40
THUMPD3
HDAC2
NOC3L
LCLAT1
PLEKHM3
FMNL3
DIABLO
TM9SF1
ZNF286A
AIP
ANKRD36C
SLC25A21
LUC7L
FANCL
GID8
DIDO1
PSMA1
PDE3B
RNF187
NANP
CCDC107
NR1D1
TMEM181
SCAMP5
WDR36
USP37
CNOT9
RMND1
DNAJC11
ARMT1
RBM28
STAT3
SNRPB
PTP4A2
EFCAB13
EBAG9
SCAF11
INTS12
GSTCD
ENO1
C6orf136
E2F6
SOS1
SAYSD1
DCLRE1C
TMEM186
PMM2
SMC3
SUGCT
MPLKIP
IFNAR1
VPS29
RAD9B
MAP2K2
LRP6
SPOP
LDHA
NUP62
IL4I1
DCP1A
ATF5
SPTSSA
NAA20
BCL7C
SCFD1
THNSL1
MAPK8
EIF4A3
DHRS4L2
SPAG4
PC
NHLRC1
GRM2
HEATR5A
CTR9
POLE4
THUMPD2
ZCCHC7
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
RPL31
TRIP4
TMEM106B
TMX3
CCDC102B
ODC1
MTMR2
RRP15
PEX3
FGFBP3
ARL6IP1
ADAT2
NID1
SNRPB2
PGRMC2
C7orf25
NOL7
TOB1
TRIM67
GRIA2
CKLF-CMTM1
CKLF
C10orf88
ZNF501
IARS1
MSL2
NUP160
VRK2
CDC16
TOLLIP
NREP
ELOVL3
ABCA3
LRP2BP
ANKRD37
PIKFYVE
NUBP1
GOPC
RSPH3
MRPL44
FAM98B
FUS
ZNF84
ZFP1
URGCP
UBE2D4
SRP54
L2HGDH
DMAC2L
CUL5
SPHK1
SLC9B1
OSBPL8
HELB
GMCL1
CDK5RAP1
AKAP11
HBS1L
DNAJC10
TRIM8
MAT2A
LAMTOR5
RETSAT
PMS1
PARD6A
ORMDL1
NPRL2
CYB561D2
ACD
H4C15
H4C14
ZKSCAN8
MIPOL1
HAAO
G2E3
FTCDNL1
CLVS1
C14orf119
ACIN1
KANSL3
CEP126
C12orf66
MED31
C17orf100
UTP11
DDX56
RSRC1
CBWD5
CBWD3
BPHL
H3-3B
ZSCAN9
DBI
C2orf76
ALCAM
TOMM34
MLLT1
LIMS1
SLBP
FAAP20
NOL10
RBM45
TRMT6
RUNDC3A
MRPS35
MCM8
COPS6
CCDC83
MRPL39
KAAG1
DCDC2
PAQR4
APMAP
AGPS
TASOR
PBLD
MEIS1
HNRNPH3
HEATR3
GOLGA8A
NDUFAF5
ESF1
RBL1
RANBP2
ZSWIM7
UFSP1
TTC19
TINF2
SUGP2
OXSM
NGLY1
MSH5
MRPL16
IMMT
ARMC6
NBPF1
MRPL17
ROMO1
NFS1
MOB4
CRNKL1
CFAP61
CDKN2AIPNL
AP3S2
MTF2
ATR
ACAD9
H4C11
RAD9A
STT3B
ZNF219
MRI1
CD274
TTI2
NUDT4
COQ8A
OXA1L
ZNF2
RNF103
POGK
NET1
UBAP2L
C1orf43
NME6
NABP1
LACC1
CCDC122
LTV1
ESCO1
PIMREG
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
RBM12
CPNE1
LOC112694756
MORN2
DHX57
TMEM18
RAB3GAP2
LOC100287896
LIPT2
KHDRBS1
ASCC3
ANAPC10
ABCE1
TRDMT1
HPS5
GTF2H1
ELOVL1
PIGF
CRIPT
RPIA
PSMD7
PHF1
JRKL
ITGB3BP
GMNN
EFCAB7
DHRS2
COMMD1
CCT4
CCDC82
C16orf46
WDR43
TTLL4
RABL2B
PAAF1
FBXO33
COA4
XKR9
LACTB2
VTA1
THOC3
SOWAHC
SHQ1
SEPTIN10
SEC24A
PYGB
NMBR
CEBPZ
SCAPER
SPATA5
SC5D
RPP38
NUDT6
HNF4G
ESYT3
CTDP1
MRPL3
MXD1
RAE1
TAB1
IMPDH2
CNPPD1
ATG7
PCNA
TSEN54
CASKIN2
NEURL2
CTSA
DCPS
TOP3B
SLC38A1
HNRNPC
EEF1AKMT1
CCDC59
H1-2
WASHC1
TTC26
PSMF1
MVD
CTNNB1
CD320
ZNF202
RPL15
NKIRAS1
C2orf73
ARPP19
TUBA1B
VPS16
PCED1A
PSME3
RPL5
PCNX4
OSGEP
EPB41L4B
DCAF10
APEX1
CRBN
ABCB6
SERF1B
SERF1A
RNMT
PGP
PCID2
MMAA
MIS18BP1
GATAD2A
FAM210A
CUL4A
SRSF6
THUMPD1
SLC7A5
RNF146
PRPSAP1
PET117
MRPL27
MARCHF8
KAT14
EME1
TSG101
STX18
STARD7
NOP2
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
MRPL21
IGHMBP2
ZNF425
ZNF398
WDR48
UCKL1
SLC25A36
SEC61G
SDCBP
SCN11A
POLR1H
GOLGA5
FBXO4
EEF1AKMT2
EAPP
DDX19B
CWC25
ATXN2L
PTDSS1
MTERF3
MARCHF7
COG7
RRN3
PPT1
NPM1
KIZ
KIAA1958
DUSP28
DCUN1D5
CHFR
C9orf147
ANKMY1
ANKEF1
HINFP
TBC1D19
SRP19
FANCD2
WDR41
TOMM5
STIP1
PPME1
NSRP1
NHEJ1
GAS2L3
CPNE4
C2CD3
TTPAL
TRA2B
SLC37A4
PTPRA
PPP4R3B
HSD17B12
EIF4G2
CD302
SLC39A1
CREB3L4
TMEM179B
TEX14
RAMAC
RAD51C
PHOSPHO2
DHRS4
CHEK1
CCDC173
AHI1
TMEM101
TBC1D15
MOCS2
BMS1
ACAP2
MIA2
COCH
USP47
TNPO1
REXO2
KDM1A
HNRNPF
GINS1
DUS1L
USP40
RPL37A
TANK
THAP5
SPAG16
SNRPD1
SF3B6
RIF1
PBRM1
GNL3
FAM228B
DNAJB9
CENPA
C4B_2
C4B
AKTIP
ZER1
TTC30B
SMIM26
SLC35F5
NFU1
MLH1
G6PC3
EPM2AIP1
DUS2
DDX28
CZIB
CCDC34
PRKDC
MCM4
IPO4
TOB2
TBC1D32
SLC25A28
SF3B5
PSMD12
L3HYPDH
JKAMP
ICE2
CIAO3
CEP192
ASNS
C15orf61
ATP5F1E
NAT10
ZCCHC9
TMEM116
STAU1
SF3A2
SEH1L
RPS7
RPLP1
PLEKHJ1
MAGOHB
LMAN1
KLHL9
HUS1
H4C3
FBXO48
EXD1
ERP29
DDX27
CHP1
APLF
SMPDL3A
SFI1
SERINC3
POLM
NCL
MGA
CBWD6
CAT
PHF3
WASHC4
ZBED8
THTPA
MBIP
GPR6
FAAH
XRN2
PEDS1-UBE2V1
PEDS1
CFDP1
PPP1R3D
PPM1D
OSGEPL1
NCK1
FAM217B
CBWD2
ANO10
ABHD5
RBM7
C11orf71
ZBED9
TGFBRAP1
SGF29
PRMT2
PLAA
IFT74
FAM149B1
ECD
CSE1L
CDCA7
IMMP1L
ELP4
UBE2E3
SLC25A13
SEC31A
RALGAPA1
PRKAR1A
NDUFA12
KRR1
KNOP1
IFT88
CHORDC1
ANKRD36B
MRPL19
CPPED1
TAMM41
PLS1
LRRC61
KANSL1L
JAM3
IDH3B
GOSR1
DBP
C18orf25
ATP5MC2
ACTR3C
DHDDS
TUBGCP3
WDR89
GPN1
CCDC121
WDR35
PUM2
FRG1
GCA
PRR3
GNL1
TMA16
SDHAF3
SCAND1
RIOK1
MDP1
CAGE1
ANAPC1
ACYP2
ZNF451
TRAF6
RAG1
PPAT
PEBP1
PAICS
NAGK
FUT10
CCDC43
VPS52
TTC17
TRAK2
TOP1
TBRG4
STRADB
STK4
RPS18
PRPF38B
FEM1B
FAN1
FAM162A
CCDC66
CCDC58
ATXN7L3B
ARHGAP5
ITPRID2
DDX18
TMEM230
SKA3
RPS3
RCCD1
PNN
PABPN1
MTIF2
MRPL57
LYPLAL1
H2AX
ERCC6
BTF3
ZC3H6
RASSF1
ZNF337
ZNF214
UGGT2
TTC9C
TEFM
SRSF2
SMG1
RPUSD4
NLRP14
MRPL40
MFSD11
METTL6
IRF9
HNRNPUL2
HIRA
FAM118B
ERCC3
EAF1
DSN1
CBFA2T2
BLOC1S6
ZNF706
ZNF292
SNAI1
RPL10A
POLR1B
ABHD12
UGP2
TRAPPC12
TEX10
SMARCAL1
RPS15
MSTO1
NCOA3
TUBD1
RPS6KB1
PSMC4
PSMB5
PRORP
PPP2R3C
NBN
MRPS7
MRPS5
H2BC17
H2AC17
GGA3
ARL14EP
CKAP5
TRAPPC6B
SRPRB
SDR39U1
PRMT5
PIP4K2B
MYO5C
MSANTD2
DUSP7
DPY30
B3GAT3
AP3S1
RGPD8
RGPD6
RGPD5
RBM18
OLA1
NUDCD2
MRRF
HMMR
HM13
GOSR2
FAM133B
RIN1
PPP2R3B
KCTD5
FAM174A
DNAJA2
COQ5
RPS6
TRMT61B
TOMM22
TMEM169
SPTLC1
RAB10
PECR
MYH7B
MITD1
IFT52
GSS
APTX
MRPL53
MMUT
KPNA5
CENPQ
BORCS5
BBS5
SLC35A3
RFC5
PRMT3
NUDT17
NFX1
MRPL1
LTBR
LATS1
EIF2D
ARL8B
AK2
POLR3E
SRSF1
SVBP
SLC35F2
PSTK
PCIF1
MTG1
LRCH3
H4C2
ERMAP
SRSF7
PFN4
H2BC14
H2AC14
CCDC88A
ATIC
STK17B
RNF141
PRDX1
KLF10
ATXN7L2
AMZ2
GEMIN2
TMEM248
SNRPE
PSAP
MAN1A1
SOS2
NUDT15
MKS1
IST1
HOMEZ
NOB1
THOC1
MYO1E
H2BC13
H2AC13
EIF3A
CPE
CDC73
CCT2
CASC3
C5orf63
ZNF23
YTHDC2
TSEN15
SLC35B3
SIRT4
RDH14
PPIH
PIGBOS1
PIGB
LZTFL1
GTPBP8
FERMT1
BNIP3L
ZNF212
TMEM126B
TMED5
GLE1
FBXL5
DLG2
CDH24
CCDC18
KBTBD3
AASDHPPT
RPS27A
CLHC1
ZNF343
H3C3
ETNK1
TAF12
MFAP3
FAM114A2
ACAT1
PCTP
B2M
GOLPH3
ACTR8
TARS3
NUP133
PSMD14
TTC4
HERC4
HDDC2
TMEM19
KBTBD7
CAVIN1
SURF6
ADGRG6
PLLP
CTSO
WASL
MRPL55
KCNK12
MMP24
MTHFD2
CDK5RAP3
NDUFS3
KBTBD4
FAM227B
DTWD1
LARP1
TBC1D13
HMGA1
MLH3
LRIF1
UTS2R
VWC2L
PNPT1
MLXIP
AP3B2
MED23
GPR158
FAT4