ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475368 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◢ SRX10475367: Hep G2

◣ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
MTRNR2L2
CELSR3
HTR5A
L1CAM
GLRA1
RAB37
MTRNR2L8
RANBP3
CHGB
EPHA10
CPLX2
SNAP25
BARHL1
LEMD3
SLC7A6OS
PRMT7
KDM3A
PIK3R3
MAPK8IP2
KATNA1
ODC1
KCNK12
SLC39A3
HDAC2
GCFC2
SAYSD1
TRIM44
SLC12A5
NOC3L
E2F6
RFC1
AATF
RNF130
SNRPB2
H4C12
MMP24
SST
CDIP1
STK25
PTPRS
MTHFD2
EVI5
VRK2
N6AMT1
UNC80
HES3
AIP
HBQ1
KAT5
CHRM4
SPOP
MED31
C17orf100
LHFPL5
SLBP
DHDDS
WDR36
CCDC92B
RBM28
CDK5RAP3
PMVK
NDUFS3
KBTBD4
ABCA3
KLF11
CISD1
DIABLO
ANK1
MSL2
FAM227B
DTWD1
SCGN
NME6
CEP295
MTF2
CYB5R4
STAT3
TMEM106B
ITPRID2
LARP1
TBC1D13
CPQ
ANKRD36
RMND5A
HMGA1
HECTD1
CKLF-CMTM1
CKLF
MLH3
UTP11
NDUFAF5
ESF1
DHRS4L2
LRIF1
MARCHF4
TCFL5
ANKRD36C
TRIP4
LACC1
CCDC122
FMNL3
UTS2R
MRPL44
TUBA1B
VWC2L
SLC25A21
VPS29
RAD9B
TOMM34
CCDC83
PNPT1
STMN3
LTV1
XRN2
MLXIP
THUMPD2
PCNA
AP3B2
VGF
ZFYVE27
EFCAB13
USP40
LCLAT1
USP14
TIGD1
EIF4E2
H3-3B
CERS6
NSUN5
PIGF
CRIPT
MRPL3
HINFP
MED23
GPR158
FAT4
UBE2Q1
TBCB
RNASEH1
POLR2I
HES6
STX16
H4C11
AP3S1
TASOR
SCFD1
HEATR5A
TSEN54
CASKIN2
PEDS1-UBE2V1
PEDS1
FANCL
SNRPB
RBM12
CPNE1
PLEKHM3
ANKRD36B
CNTRL
C5
TRMT11
PHF3
NDUFAF1
NPPB
NTSR2
MRPL39
TBC1D19
NBEAL1
TM9SF1
SRSF6
MRPL19
RPS6
TAF10
COPS7B
OGDHL
MIA2
RPL37A
RRP1B
HSF2BP
CC2D1A
C19orf57
RPL31
TUBGCP3
PALB2
DCTN5
SLC25A10
DHX40
USP37
CNOT9
LAMTOR5
SEC23A
HDAC4
CNPY3
HPCA
RBL1
SRP19
GEMIN2
PDE7A
PSMA1
PDE3B
POLR2J3
EPM2A
DTD2
DCLRE1C
ZNF780B
MPHOSPH6
MFF
C15orf61
ZNF843
ZC3H8
TTI1
RPRD1B
RAD50
SMAD2
CDKN2C
PGRMC2
RANBP2
NBPF1
PMS2
AIMP2
ZCCHC7
NEURL2
CTSA
ZC3H15
CPPED1
COA1
DDX1
SVOP
ATP5F1E
POLR3E
KIF27
PTDSS1
MTERF3
MARCHF7
ZNFX1
NADK2
DPY19L4
TMEM186
PMM2
C5orf51
EBAG9
WASHC4
CRH
DHRS4L1
LMCD1
PRKDC
MCM4
ISM1
DCP1B
GRM1
MRPL17
LOC112694756
ZFR
SLC36A4
POLE4
FAM98B
KAAG1
DCDC2
DGAT2
SLC39A1
CREB3L4
SCLT1
RIOK2
PCF11
C4orf33
THUMPD3
NAT10
CFDP1
HBS1L
ASNSD1
ASDURF
AHR
C7orf25
FAAP20
H1-2
MRPL21
IGHMBP2
TPR
ODR4
NAV2
CALM2
COCH
WDR89
C10orf88
EIF2S2
CMTR2
FUS
RPIA
MORN2
DHX57
NOB1
SPAG4
VPS16
PCED1A
EMC2
H4C15
H4C14
DDX56
RBM7
C11orf71
HEXA
C5orf24
RSPH3
TRDMT1
PSMD14
ZNF248
UBE2D3
CISD2
SCAPER
PGGT1B
GALK2
TDRKH
SULT6B1
H3C2
CEP162
CEBPZOS
XKR9
LACTB2
MXD1
NUP54
BUD13
NXF1
LDHA
NOL7
LRP2BP
ANKRD37
GCA
PDHB
NOTCH2NLA
ZC3H6
NOL10
RAD9A
DCPS
ZNF280D
METTL3
ASCC1
ANAPC16
GPN1
CCDC121
MSRB3
HIRIP3
EFTUD2
CCDC103
CRBN
FANCD2
FN1
STT3B
COG7
TMEM268
POLG2
PFDN4
RBM45
MMADHC
TMX3
CCDC102B
DNAJC10
CKAP5
CDC27
DDX18
TBC1D9
PSME3
PRR3
GNL1
RASSF1
TRAPPC6B
RAE1
NR1H3
H2AZ2
ACP2
FBXO8
CEP44
OXA1L
TANK
IPO4
MTMR2
STK35
MTX2
NCOA3
GDI2
CDCA7
ABCB6
KBTBD3
AASDHPPT
SRSF1
UCP2
MRM3
GLOD4
TAMM41
ESCO1
RPS27A
CLHC1
TOB1
TTC12
UBA5
ACAD11
IMMP1L
ELP4
PDRG1
LCMT2
ADAL
YAE1
UBR2
RILPL1
KCNB1
RPS3A
CCDC90B
INSM2
DNAJC6
CCNL1
ENOSF1
IKZF3
GDAP1L1
SRRM3
PTPRN
WTAP
SOD2
GTF3C3
EIF3B
CHGA
GJA10
EXOSC6
NRSN1
CHRNB2
ABCC6
SCRT2
LDAH
WDR74
RABGGTA
PPP1R3C
SP5
AKAP10
TENT4A
SF3A3
ACTL6B
AAR2
PGBD5
SLC3A2
TCAIM
ALKBH2
LRRC59
FAM177A1
AARS2
ZNF286A
LUC7L
GID8
DIDO1
RNF187
NANP
CCDC107
NR1D1
TMEM181
SCAMP5
RMND1
DNAJC11
ARMT1
PTP4A2
SCAF11
INTS12
GSTCD
ENO1
C6orf136
SOS1
SMC3
SUGCT
MPLKIP
IFNAR1
MAP2K2
LRP6
NUP62
IL4I1
DCP1A
ATF5
SPTSSA
NAA20
BCL7C
THNSL1
MAPK8
EIF4A3
PC
NHLRC1
GRM2
CTR9
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
RRP15
PEX3
FGFBP3
ARL6IP1
ADAT2
NID1
TRIM67
GRIA2
ZNF501
IARS1
NUP160
CDC16
TOLLIP
NREP
ELOVL3
PIKFYVE
NUBP1
GOPC
ZNF84
ZFP1
URGCP
UBE2D4
SRP54
L2HGDH
DMAC2L
CUL5
SPHK1
SLC9B1
OSBPL8
HELB
GMCL1
CDK5RAP1
AKAP11
TRIM8
MAT2A
RETSAT
PMS1
PARD6A
ORMDL1
NPRL2
CYB561D2
ACD
ZKSCAN8
MIPOL1
HAAO
G2E3
FTCDNL1
CLVS1
C14orf119
ACIN1
KANSL3
CEP126
C12orf66
RSRC1
CBWD5
CBWD3
BPHL
ZSCAN9
DBI
C2orf76
ALCAM
MLLT1
LIMS1
TRMT6
RUNDC3A
MRPS35
MCM8
COPS6
PAQR4
APMAP
AGPS
PBLD
MEIS1
HNRNPH3
HEATR3
GOLGA8A
ZSWIM7
UFSP1
TTC19
TINF2
SUGP2
OXSM
NGLY1
MSH5
MRPL16
IMMT
ARMC6
ROMO1
NFS1
MOB4
CRNKL1
CFAP61
CDKN2AIPNL
AP3S2
ATR
ACAD9
ZNF219
MRI1
CD274
TTI2
NUDT4
COQ8A
ZNF2
RNF103
POGK
NET1
UBAP2L
C1orf43
NABP1
PIMREG
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
TMEM18
RAB3GAP2
LOC100287896
LIPT2
KHDRBS1
ASCC3
ANAPC10
ABCE1
HPS5
GTF2H1
ELOVL1
PSMD7
PHF1
JRKL
ITGB3BP
GMNN
EFCAB7
DHRS2
COMMD1
CCT4
CCDC82
C16orf46
WDR43
TTLL4
RABL2B
PAAF1
FBXO33
COA4
VTA1
THOC3
SOWAHC
SHQ1
SEPTIN10
SEC24A
PYGB
NMBR
CEBPZ
SPATA5
SC5D
RPP38
NUDT6
HNF4G
ESYT3
CTDP1
TAB1
IMPDH2
CNPPD1
ATG7
TOP3B
SLC38A1
HNRNPC
EEF1AKMT1
CCDC59
WASHC1
TTC26
PSMF1
MVD
CTNNB1
CD320
ZNF202
RPL15
NKIRAS1
C2orf73
ARPP19
RPL5
PCNX4
OSGEP
EPB41L4B
DCAF10
APEX1
SERF1B
SERF1A
RNMT
PGP
PCID2
MMAA
MIS18BP1
GATAD2A
FAM210A
CUL4A
THUMPD1
SLC7A5
RNF146
PRPSAP1
PET117
MRPL27
MARCHF8
KAT14
EME1
TSG101
STX18
STARD7
NOP2
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
ZNF425
ZNF398
WDR48
UCKL1
SLC25A36
SEC61G
SDCBP
SCN11A
POLR1H
GOLGA5
FBXO4
EEF1AKMT2
EAPP
DDX19B
CWC25
ATXN2L
RRN3
PPT1
NPM1
KIZ
KIAA1958
DUSP28
DCUN1D5
CHFR
C9orf147
ANKMY1
ANKEF1
WDR41
TOMM5
STIP1
PPME1
NSRP1
NHEJ1
GAS2L3
CPNE4
C2CD3
TTPAL
TRA2B
SLC37A4
PTPRA
PPP4R3B
HSD17B12
EIF4G2
CD302
TMEM179B
TEX14
RAMAC
RAD51C
PHOSPHO2
DHRS4
CHEK1
CCDC173
AHI1
TMEM101
TBC1D15
MOCS2
BMS1
ACAP2
USP47
TNPO1
REXO2
KDM1A
HNRNPF
GINS1
DUS1L
THAP5
SPAG16
SNRPD1
SF3B6
RIF1
PBRM1
GNL3
FAM228B
DNAJB9
CENPA
C4B_2
C4B
AKTIP
ZER1
TTC30B
SMIM26
SLC35F5
NFU1
MLH1
G6PC3
EPM2AIP1
DUS2
DDX28
CZIB
CCDC34
TOB2
TBC1D32
SLC25A28
SF3B5
PSMD12
L3HYPDH
JKAMP
ICE2
CIAO3
CEP192
ASNS
ZCCHC9
TMEM116
STAU1
SF3A2
SEH1L
RPS7
RPLP1
PLEKHJ1
MAGOHB
LMAN1
KLHL9
HUS1
H4C3
FBXO48
EXD1
ERP29
DDX27
CHP1
APLF
SMPDL3A
SFI1
SERINC3
POLM
NCL
MGA
CBWD6
CAT
ZBED8
THTPA
MBIP
GPR6
FAAH
PPP1R3D
PPM1D
OSGEPL1
NCK1
FAM217B
CBWD2
ANO10
ABHD5
ZBED9
TGFBRAP1
SGF29
PRMT2
PLAA
IFT74
FAM149B1
ECD
CSE1L
UBE2E3
SLC25A13
SEC31A
RALGAPA1
PRKAR1A
NDUFA12
KRR1
KNOP1
IFT88
CHORDC1
PLS1
LRRC61
KANSL1L
JAM3
IDH3B
GOSR1
DBP
C18orf25
ATP5MC2
ACTR3C
WDR35
PUM2
FRG1
TMA16
SDHAF3
SCAND1
RIOK1
MDP1
CAGE1
ANAPC1
ACYP2
ZNF451
TRAF6
RAG1
PPAT
PEBP1
PAICS
NAGK
FUT10
CCDC43
VPS52
TTC17
TRAK2
TOP1
TBRG4
STRADB
STK4
RPS18
PRPF38B
FEM1B
FAN1
FAM162A
CCDC66
CCDC58
ATXN7L3B
ARHGAP5
TMEM230
SKA3
RPS3
RCCD1
PNN
PABPN1
MTIF2
MRPL57
LYPLAL1
H2AX
ERCC6
BTF3
ZNF337
ZNF214
UGGT2
TTC9C
TEFM
SRSF2
SMG1
RPUSD4
NLRP14
MRPL40
MFSD11
METTL6
IRF9
HNRNPUL2
HIRA
FAM118B
ERCC3
EAF1
DSN1
CBFA2T2
BLOC1S6
ZNF706
ZNF292
SNAI1
RPL10A
POLR1B
ABHD12
UGP2
TRAPPC12
TEX10
SMARCAL1
RPS15
MSTO1
TUBD1
RPS6KB1
PSMC4
PSMB5
PRORP
PPP2R3C
NBN
MRPS7
MRPS5
H2BC17
H2AC17
GGA3
ARL14EP
SRPRB
SDR39U1
PRMT5
PIP4K2B
MYO5C
MSANTD2
DUSP7
DPY30
B3GAT3
RGPD8
RGPD6
RGPD5
RBM18
OLA1
NUDCD2
MRRF
HMMR
HM13
GOSR2
FAM133B
RIN1
PPP2R3B
KCTD5
FAM174A
DNAJA2
COQ5
TRMT61B
TOMM22
TMEM169
SPTLC1
RAB10
PECR
MYH7B
MITD1