ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477188 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◣ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
DEPP1
INSM2
NRL
DCAF11
NKX1-1
HTR5A
TNFAIP2
LIN28A
FAM24A
MTRNR2L2
MSH3
DHFR
CELSR3
L1CAM
MTRNR2L1
CPLX2
RAB37
SLC6A12
PTH2R
ZNF117
ERV3-1-ZNF117
ERV3-1
SH2D3C
GLRA1
DUX4
KCNH7
SMIM17
ZNF48
TBC1D10B
MYLPF
ZC3H18
FRG2C
MAPK8IP2
MTRNR2L8
IL11RA
GALT
KRT39
SCN1A
RTBDN
MAST1
RANBP3
OTX1
BARHL1
EAPP
CHGB
DLGAP3
NAA20
EPHA10
CCDC200
KRTAP5-6
SCRT1
DGAT1
ORMDL3
GSDMB
OPA3
HPCA
RIN2
CCDC92B
SLC45A4
BOD1L2
LHFPL5
CLPS
FBLN1
MYT1
SRRM3
SMIM19
SLC20A2
SIGLEC10
VGF
SNAP25
KCNH6
TECTB
MMP24
LRMDA
ICMT
HES3
ZNF23
INTS12
GSTCD
WDR74
STX5
ITGB1BP1
CPSF3
SLC7A6OS
PRMT7
FAM3A
FOXJ2
GRM1
STMN3
RTEL1
KCNK12
TMEM230
PCNA
CDS2
JUND
IQCN
UNC80
STAT1
PEX3
ADAT2
FRG2
SST
METTL9
BPIFA3
PLEKHM3
PTPRN
SCRT2
RIPPLY2
CYB5R4
NDUFAF5
ESF1
ZNF670
EBI3
CDK5RAP1
GDAP1L1
CCN2
UBE2Q1
CHRNB2
DNAJC6
GTF3C3
C2orf66
RANBP2
STX18
NOMO3
NOMO2
ABCC6
SPINK1
DUS1L
NTSR2
LPIN1
SLC39A3
KLF11
TMC7
PSMF1
STX16
DCP1A
VTN
SEBOX
SARM1
OGDHL
SP2
POLR3E
PPP3CA
TM9SF1
IPO4
C14orf93
DDX1
FURIN
JPH4
CWC25
TMEM181
CCNC
COPS8
MRPL44
TMEM242
SH3YL1
ACP1
NPPB
PIH1D1
ALDH16A1
MTF2
MOB4
MITD1
NOL7
H4C12
H4C11
H2BC15
H2AC15
TRMT61B
TOMM34
STK4
ANK1
CP
PDE6D
COPS7B
EXT1
USPL1
HMGB1
MARCHF4
SF3A3
TTI2
PDXDC1
CADM3
SEC24A
SAR1B
SLC35A3
DPY19L4
BHLHE40
MED23
ENPP3
USP30
TMEM186
PMM2
SVOP
PTGDR2
NME1-NME2
NME1
PRR13
CA4
IRF9
RAP1GAP
COMMD1
CCT4
CHRM4
NLGN4Y
NSFL1C
FAM227B
DTWD1
TMEM107
SCFD1
ACTL6B
TMEM41A
PHF3
VNN3
RAD54L2
TRIP4
PCLAF
SNAP47
JMJD4
MRPL58
GPR158
MRPS31
ACSS3
PRMT5
LRRC59
CEMIP
RBM28
USP14
NDUFS3
KBTBD4
FAM180B
CPVL
CHN2
RPS7
TACO1
SYNGAP1
PHF1
CUTA
TIGD1
EIF4E2
C1QL2
EXOC3L4
WDR36
AAR2
TSPAN10
NPLOC4
SYP
HBQ1
HBA2
HBA1
CCL20
SPNS2
SLC12A5
LRRC37A3
ZFR2
ATCAY
NPIPA3
NPIPA2
PMS2
AIMP2
HSPE1-MOB4
HSPE1
HSPD1
DRG2
SCIMP
MAMDC2
TGM1
RABGGTA
WTAP
SOD2
CCNL1
ANKRD36
KANSL3
FER1L5
ID1
HOXD1
RTF2
SH3BGRL2
MRPL40
HIRA
SLC30A6
SNRPB2
FLRT2
GCFC2
BCKDK
PGRMC2
PPP4R3B
HEATR5A
UGT1A1
TEFM
HDAC4
LEMD3
MFF
PTPRS
E2F3
TSSK4
FOXJ3
EXOSC6
KRCC1
CPNE4
MAP1LC3B
FBXO31
DTD2
SLC25A21
TMEM222
SHOX2
MRPL3
NUF2
KDM3A
CCDC88A
ZNF292
ZNF841
QTRT1
CCDC59
PET117
KAT14
NUDT1
MRM2
MAD1L1
XRN2
PLRG1
FGB
ALOX15B
PTPRH
PRKAB2
CHD1L
HS3ST2
LOC102724770
DGCR6
SEZ6
MTIF2
TSEN54
LLGL2
CASKIN2
SNRPC
HHATL
PTP4A2
GMEB2
NOSTRIN
RBL1
SLC44A1
RGMB
CCL16
AP3S2
GOLM1
PREPL
CAMKMT
UCHL5
RO60
ACSL4
JPH3
EXOC2
SOS1
TP53I3
SF3B6
FAM228B
PTMA
TBCD
CALM2
NUP153
MRPS23
CBWD2
FAN1
TOX4
RAB2B
PPFIA3
C19orf73
STRADA
MRPL53
MOGS
FGG
SCGN
HDAC2
CDIP1
PKP4
CCDC148
STK25
PHF14
POLR2J3
KIF5C
RGS3
CNPY3
GOT2
NFKBIA
SSBP1
ZBTB45
SLC27A5
THOC3
PLA2G10
NCOA5
SPRED2
SAAL1
THUMPD1
DNAJC24
DCDC1
UBAP2
RESP18
AIP
TRMT6
MCM8
HDDC2
PYGB
PELATON
BICDL1
ANAPC11
ALYREF
MPC1
SEZ6L2
ASPHD1
FST
TBC1D19
SMG8
BSPRY
GRM2
MDP1
CHMP4A
OPA1
PPP1R3C
HMGA1
VWC2L
TANK
MRM3
GLOD4
MMAA
RAB5IF
SLC38A3
SEPTIN9
INPP1
ZSWIM1
SPATA25
NEURL2
CTSA
RMND1
ARMT1
DHDDS
PPM1H
NOC4L
DDX51
ZNF165
OR1F12
SEC23A
ABCA3
PRXL2B
FRA10AC1
TSN
RRP1B
HSF2BP
LOC102724265
PMVK
CDKN2AIPNL
RPL27
IFI35
RSPH3
HECTD1
DUS2
DPEP2NB
DDX28
KIAA1586
INSIG2
ZNFX1
ZNF703
AATF
EXOSC2
XYLB
PPP1R11
POLR1H
MTHFD2
TRIM74
TRIM73
NDUFAF1
CNOT3
NXF1
HAAO
DNAJB3
NOP9
DHRS1
GRIA2
KCTD5
PPIL4
SKOR1
CDH1
BLOC1S5
PGBD5
CALM1
CSTF1
AURKA
DCAF10
SLC18A3
CHAT
PIGU
ZNF513
SNX17
EIF2B4
ENOSF1
CLK1
RNF130
CPS1
RBM12
CPNE1
TRMT2A
RANBP1
SCAMP1
RFT1
MAP2K2
LAMP1
ZGPAT
ARFRP1
FGA
TGFBR2
CBSL
CBS
PDE4C
PSMD3
ZNF219
TMEM253
TMEM106B
TOMM22
TMEM14B
HPCAL1
WBP2
UNC13D
STAT3
DMAP1
H3C12
H2BC17
H2AC17
LDAH
BIRC2
HS6ST1
CCL14
FAM98B
MAGOHB
SEC14L1
RFC1
ZPBP2
IKZF3
CPNE9
TTC30A
ACOX3
TRMT44
NDUFA12
KIZ
BCL2L11
PLA2G2A
SLC11A2
BRMS1L
NDUFC2-KCTD14
NDUFC2
DEXI
CLEC16A
HPS6
ARMH3
METTL21A
APOB
MIA2
LHPP
POLDIP3
PTPN4
MTHFD1L
SNX18
UQCRQ
LEAP2
GDF9
ACAD9
PRMT8
AKAIN1
GJA10
GOSR2
NSRP1
FN3K
SULT2B1
RAB17
TMEM179
CCDC65
FUS
TCP10L
ZC3H6
LCMT1
PECAM1
NEUROD1
MLN
SORL1
PDE1C
NUP54
USP42
TTC4
RBM45
PDE11A
TBC1D14
CETN3
MRPL39
WASHC2C
TRDMT1
FANCL
CRH
L2HGDH
DMAC2L
STOML2
PIGO
FAM214B
RRBP1
MRPL55
BANF2
SLC39A13
NHLRC1
TUBGCP3
CTNNB1
NET1
SIRT4
NDUFS7
RUSF1
ZNF425
ZNF398
SRCIN1
MDM2
SPAG9
ETFA
PUM2
G2E3
SNF8
PRCD
CYGB
SREK1
SNRPB
ATIC
RUVBL1
EEFSEC
TMEM101
KRR1
MNAT1
DNAJC25-GNG10
DNAJC25
ZNF843
TMED4
DDX56
FAM222A
SRP54
TDP2
ACOT13
ERLEC1
ASB3
TMEM248
H1-2
LYSMD3
ZNF747
PIK3R3
IDH3B
PCK2
TOP3B
LOC112694756
GZF1
ZNF296
GEMIN7
BUD13
RBFOX2
BCL6
RPS15A
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
THNSL1
NEK2
SUMF1
SMG1
AP3S1
ABHD12
NOC3L
USP40
NCL
FAM163B
ATF2
CPPED1
ELL
COPS7A
KNOP1
IQCK
POLR3G
MBLAC2
CLUAP1
C16orf90
KATNA1
GBP6
GORASP2
HNF4A
RPS6
COQ9
CIAPIN1
SPOP
DNMT3A
PCDH8
NOL10
ACTL10
CTDSPL
C20orf144
MIDEAS
SRSF2
MFSD11
HSP90AB1
MRPL21
IGHMBP2
FAM187A
EFTUD2
CCDC103
LONP2
ABCC11
EIF2D
FITM2
ZBTB4
SLC35G6
POLR2A
DHRS2
PPP5C
ZSCAN9
SLC35B2
NFKBIE
RPTOR
FBXL16
THAP4
ATG4B
NID1
BIRC6
SH2D6
CAPG
HAL
SULT1A1
SLX4IP
MKKS
CIBAR2
ARID3A
CABP7
WASHC1
TRIM67
ETV4
YTHDF1
PBOV1
IL1R1
EDC4
AARS2
EEF1AKMT2
ABRAXAS2
AP5S1
ERCC5
TTC26
EIF2B5
VTA1
NMBR
GTF2H2C_2
CHEK1
GTF2H2C
H3C4
FAM177A1
H4C5
H2BC7
H2AC7
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
CTBS
SLC51B
TBPL1
WASL
METTL15
KIF18A
BMS1
C16orf72
LGR5
PRORP
PPP2R3C
CIAO3
ZADH2
TSHZ1
ELK3
ADGRG6
TRIAP1
COX6A1
MYBL2
DEFB132
AGT
SARAF
KHK
EMILIN1
RPS15
ASF1A
PPP1R1B
CD164
CLVS1
SULT4A1
EFCAB13
WDR45B
SYN1
SCG3
CFP
TAMM41
DCP1B
MPHOSPH6
DNAJB13
GINS1
TTPAL
TTLL4
PPP1R3E
BCL2L2-PABPN1
BCL2L2
BIRC5
GMCL1
TRIM44
ERLIN1
UNC50
COA5
KIF16B
NAT10
CRLF3
ATAD5
HEXA
E2F6
ADNP
TUBB3
NSA2
MC1R
GFM2
TOB2
CNN3
CPT1A
RPS8
SYNJ2
PRDX1
ALG10B
GEMIN2
FAM207A
H2BC14
H2AC14
PTDSS1
MTERF3
RARS1
AKAP10
ENTPD6
ATG16L1
ADSS1
TRMU
TRIM33
UTP3
TMEM212
NFAT5
CRLS1
NOL11
CCNJ
INHBE
GLI1
RPL12
LRSAM1
ATP5MC2
NOCT
ANXA2
ARL14EP
RABL2B
ESYT3
MED15
ZNF451
C10orf88
TVP23B
TRIB3
ARFGAP3
SRFBP1
EEF2K
TGOLN2
TUBB2A
ATP2B2
ISOC1
RBPJ
PRKDC
MCM4
ARL6IP1
GRAMD1A
TBC1D13
WFDC3
DNTTIP1
TBC1D22A
UGGT1
TCIM
NRSN1
KIAA1841
HADHB
HADHA
SLC25A10
MRPL12
GPC6
RNF149
HUS1
ZSCAN25
RMDN3
GCHFR
C15orf62
LYZ
CYCS
ZNF460
PDHX
APIP
SLC39A4
PLA2G15
ESRP2
EPHX1
CPSF1
ROCK2
CDCA7
NDUFAF3
IMPDH2
DALRD3
OR6B2
NDUFA10
BAIAP2
SPATA2
THOC1
MRPL2
KLC4
CUL7
SUGP2
SMIM3
SALL4
ELK4
ARMC6
TOB1
H2BC5
H1-4
DIDO1
TMEM169
PECR
LSM12
G6PC3
MACC1
ATXN2L
HHEX
FSTL4
GSPT1
MAP3K4
FCRLA
CSF3R
SNTG1
ARHGAP18
C16orf46
GCLC
C2orf42
ZNF354B
IPO13
HBM
CHIC2
EVI5
ENO1
PLAG1
CHCHD7
TAB1
PIKFYVE
RFXANK
BORCS8
AIFM2
DPH7
USP36
IL1RN
HINT3
LTV1
RPL31
RRN3
WDR35
C6orf62
EPHX2
MMADHC
AHCY
TULP3
RHNO1
FOXM1
NARS1
NUDT15
ZNF22
APOL2
SCAMP5
FAM133B
FAM53C
CDC25C
SRSF6
SCNN1A
LTBR
MRPL16
ABCB6
PPIL3
NIF3L1
SEC22B
RNF144A
LAP3
H4C3
H1-6
AHSG
ACSL3
DDX18
OPRM1