ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360007 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◣ SRX360007: LoVo

◢ HOXD1: STRING

PTPRN2
MAMDC2
COL23A1
LOC102724770
DGCR6
ISG15
AGRN
IL32
NOC4L
DDX51
KIF5C
DUX4
RGPD2
RGPD1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
NPAS4
XKR7
IQSEC3
ING3
INSM2
DEPP1
NRL
DCAF11
NKX1-1
HTR5A
LIN28A
FAM24A
CELSR3
TNFAIP2
GLRA1
L1CAM
CPLX2
RAB37
MTRNR2L1
PTH2R
KCNH7
SLC6A12
ZNF117
ERV3-1-ZNF117
ERV3-1
SH2D3C
SMIM17
EPHA10
ZC3H18
BARHL1
FRG2C
ZNF48
TBC1D10B
MYLPF
SCRT1
DGAT1
CHGB
RTBDN
MAST1
SCN1A
KRT39
OTX1
MAPK8IP2
RANBP3
NAA20
IL11RA
GALT
BOD1L2
EAPP
DLGAP3
FAM3A
RIN2
SMIM19
SLC20A2
KRTAP5-6
SNAP25
LHFPL5
CLPS
CCDC200
ITGB1BP1
CPSF3
STX16
OPA3
UNC80
SIGLEC10
MYT1
LRMDA
VGF
SCRT2
ICMT
HES3
ZNF670
HPCA
KCNH6
SST
GDAP1L1
SRRM3
KCNK12
ORMDL3
GSDMB
GRM1
ANK1
OGDHL
TECTB
MMP24
ZNF23
UBE2Q1
CHRNB2
CCDC92B
FOXJ2
SH3BGRL2
PLEKHM3
FRG2
SLC38A3
BPIFA3
NPPB
RIPPLY2
CYB5R4
TMEM230
PCNA
CDS2
NTSR2
LPIN1
MRPL44
CA4
INTS12
GSTCD
SLC7A6OS
PTPRN
PRMT7
STMN3
RTEL1
PPP3CA
TMEM242
SLC45A4
WDR74
STX5
NDUFAF5
ESF1
GCFC2
TM9SF1
IPO4
STAT1
CDK5RAP1
PSMF1
CEMIP
H4C12
H4C11
H2BC15
H2AC15
GTF3C3
C2orf66
SEC24A
SAR1B
METTL9
DNAJC6
NOMO3
NOMO2
ABCC6
MRPL39
SLC39A3
SLC12A5
SCGN
PIH1D1
EXT1
ALDH16A1
RBM28
USPL1
HMGB1
ACSS3
CHRM4
TMC7
AAR2
SCFD1
MTF2
RPS7
MED23
ENPP3
RANBP2
RAD54L2
VTN
SEBOX
SARM1
PDE6D
COPS7B
JPH4
DCP1A
MARCHF4
SEZ6
PTGDR2
NUF2
NME1-NME2
NME1
LEMD3
SP2
PGBD5
TRIP4
PCLAF
MFF
C14orf93
PRMT5
FAM227B
DTWD1
JUND
IQCN
PET117
KAT14
CDIP1
EBI3
CWC25
RAP1GAP
PAX5
MITD1
TMEM181
TIGD1
EIF4E2
DDX1
TSSK4
SLC35A3
PDE4C
HDAC2
MAP1LC3B
FBXO31
DTD2
PEX3
ADAT2
SF3A3
BHLHE40
DPY19L4
KLF11
CP
TGM1
RABGGTA
COMMD1
CCT4
STX18
IRF9
KANSL3
FER1L5
VWC2L
PTPRH
MOB4
SLC25A21
NSFL1C
CCN2
PDXDC1
HEATR5A
TSPAN10
PHF3
NPLOC4
HBQ1
HBA2
HBA1
USP30
KDM3A
CCDC88A
WTAP
SOD2
SPINK1
LRRC37A3
NOL7
DUS1L
FOXJ3
SNAP47
JMJD4
CCNC
RFC1
NPIPA3
NPIPA2
WBP2
UNC13D
USP14
PMS2
NOC3L
AIMP2
CPPED1
LRRC59
PRMT8
SLC30A6
CCNL1
NLGN4Y
FBLN1
CALM1
KATNA1
FURIN
PGRMC2
CCL16
ZNF841
NHLRC1
TRMT61B
POLR3E
SNRPB2
TANK
TACO1
SEZ6L2
GRIA2
EXOC3L4
ASPHD1
UGT1A1
ZFR2
MRPL58
ATCAY
PTPRS
SH3YL1
QTRT1
METTL21A
AP3S2
XRN2
RESP18
PLA2G10
COPS8
PKP4
CCDC148
CADM3
ACP1
ZPBP2
IKZF3
APOB
TMEM222
PLRG1
FGB
MRPL40
HSPE1-MOB4
HSPE1
HSPD1
HIRA
SNTG1
ID1
ALOX15B
CLVS1
ANKRD36
JPH3
CNPY3
TMEM186
PMM2
HOXD1
EXOC2
ACTL6B
RSPH3
MTIF2
WASHC2C
LAMP1
PRR13
PPFIA3
GOLM1
FRA10AC1
C19orf73
PIK3R3
HDAC4
TPH2
ZNFX1
NEUROD1
DRG2
TOMM34
STK4
STAT3
RTF2
NDUFAF1
GPR158
EPM2A
BICDL1
TP53I3
SF3B6
SCIMP
FAM228B
AKAIN1
PSMD3
SHOX2
SEPTIN9
CHGA
TMEM107
GRM2
TSEN54
SNRPC
LLGL2
INPP1
FST
CASKIN2
ZNF165
RBL1
OR1F12
H4C3
H1-6
TEFM
SEC23A
PPP4R3B
LTV1
SRSF2
NDUFS3
MFSD11
KBTBD4
HHATL
FAM180B
SLC44A1
NDUFA12
FUS
FGG
PTP4A2
TMEM41A
TUBGCP3
NCOA5
CNOT3
ZNF703
TCP10L
NUS1
AIP
AATF
MDP1
CTNNB1
CHMP4A
POLDIP3
EVI5
HSP90AB1
SNRPB
PDE1C
PTMA
CPVL
CHN2
CCDC59
ZFYVE27
TSN
ABCA3
WDR36
PRKAB2
CHD1L
OPA1
CCL20
TOB1
HECTD1
ZSWIM1
SPATA25
NEURL2
MRPS31
HS3ST2
CTSA
TTI2
ODC1
NFAT5
NET1
GBP6
SOGA3
RPTOR
PREPL
CAMKMT
TBC1D19
ZNF219
TRMT6
TMEM253
SVOP
RNF130
MCM8
ATIC
TBCD
SMG8
RGMB
MRPL21
IGHMBP2
SYP
SPRED2
BCKDK
GORASP2
PRKDC
MCM4
MRM3
GOT2
GLOD4
DUS2
DPEP2NB
DDX28
MRPL3
STK25
NXF1
FAM187A
EFTUD2
CCDC103
SULT4A1
SPNS2
ZNF473
VRK3
CSTF1
AURKA
EXOSC6
TRAF6
RAG1
NUP54
FAN1
METTL15
KIF18A
ZNF451
PHF14
MRPL53
MOGS
CABP7
RRP1B
PRDX1
HSF2BP
HDDC2
SNRPD1
KIZ
FBXL16
AHSG
GMEB2
ATP6V1B2
LOC102724265
KIAA1958
DMAP1
DHRS4L2
C9orf147
ZBTB45
SLC27A5
SCAMP5
TMEM106B
ROCK2
HS6ST1
BRMS1L
PMVK
NDUFC2-KCTD14
NDUFC2
LONP2
H3C12
H2BC17
H2AC17
ACSL3
ABCC11
ZNF292
FAM222A
THUMPD1
EBAG9
DCAF10
CALM2
ACIN1
SIRT4
NUP153
NDUFS7
KIAA1586
PALB2
DCTN5
CPS1
EXOSC2
ALG10B
MARCHF8
POLR2J3
MLN
MIA2
E2F3
DDX18
USP42
PTPN4
MAT2A
GEMIN2
CMTR2
BSPRY
XKR9
LDAH
LACTB2
HNF4A
FABP1
CCL14
MMAA
GGA2
TRIB1
SRP54
RUVBL1
RPS6
RPL31
RFT1
EEFSEC
VTA1
NMBR
MRPS23
EIF2D
SORL1
MTHFD1L
MAP3K7CL
COQ9
CIAPIN1
CCT8
FAM207A
TMEM262
SPOP
GPCPD1
RMND1
POLR2C
HEXA
ARMT1
SPTSSA
NCOA3
GTF2H2C_2
FITM2
COG1
ZC3H6
SYNGAP1
PHF1
CUTA
TTC4
NOMO1
KCTD5
FAM133B
ZNF503
PPP1R3C
COMP
UCHL5
RO60
FAM53C
CDC25C
PPIL4
NFKBIA
HMGA1
PSMD7
ITGB3BP
FANCL
EFCAB7
BMS1
ZER1
TCTE3
ERMARD
DHDDS
CRH
ZGPAT
WASHC1
OPRM1
H2BC14
H2AC14
ARFRP1
WDR43
HM13
C1QL2
C16orf89
ALG1
TF
TAF12
EDC4
CPNE9
TRIM67
TMEM101
PYURF
PIGY
HERC3
FN1
STRADA
SLC18A3
NPIPB9
CHAT
CDK5R2
TMEM129
TACC3
SLBP
RBM45
PTDSS1
PDE11A
MTERF3
SOS1
SLC7A14
RPS15A
MUC5B
GINS1
ERN1
AURKAIP1
ZBTB4
SLC35G6
RBM12
POLR2A
CPNE1
RARS1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
FAM98B
THOP1
SGTA
RNF103-CHMP3
RMND5A
DNAH14
CHEK1
CDKN2AIPNL
PUM2
HAAO
ADGRG6
THUMPD2
N6AMT1
ZC3H7A
XYLB
FZD5
TOX4
TMEM167B
RAB2B
IDH3B
GTF2H2C
DHRS2
THAP4
PCK2
ATG4B
AP3B2
MAGOHB
INSIG2
EFCAB13
CERS6
TRDMT1
TOP3B
SLC37A4
LOC112694756
C16orf72
TRIAP1
TOMM22
MRI1
LMLN2
ENO1
ELL
E2F6
COX6A1
C19orf53
C14orf119
ANO10
ABHD5
TOMM5
SLC25A10
RRN3
PIGU
MRPL12
EEF1AKMT4-ECE2
EEF1AKMT4
DNMT3A
CTNND2
ALG3
ZFP1
RTTN
RAB5IF
WDR35
TMEM14B
MAP2K2
ZNF337
H2BC5
H1-4
WDR45B
TMEM179
H3C4
ZNF513
SNX17
KCNH4
HCRT
G2E3
EIF2B4
CDCA7
ZNF3
TBL3
RPS2
RPL27
RNF151
NOXO1
MRPS5
IFI35
COPS6
NID1
NFE2L2
NABP1
MRPS18C
HELQ
FAM177A1
C10orf88
TTPAL
CCT2
TBC1D14
PIGL
NCOR1
FAAH
DNAJC24
DCDC1
CBWD2
AARS2
UBAP2
TVP23B
TRMT2A
RANBP1
PYGB
PSME3
LGR5
BECN1
ARHGAP18
PPP5C
GPC6
FN3K
FGA
POLR3D
GJA10
TUBD1
TDP2
SLC24A1
RPS6KB1
INTS14
ACOT13
TTLL4
TRIB3
SYN1
SCG3
ID2
ERLEC1
CFP
ASB3
AKAP10
ADNP
THNSL1
SPECC1
NOSTRIN
DIDO1
CYP3A7-CYP3A51P
CYP3A7
BCL2L11
ARL6IP1
ZMPSTE24
UTP4
SLC35F5
PPM1H
DSTYK
DERPC
COPS7A
CHTF8
BCL7B
ACSL4
TATDN3
SNX18
PNPT1
PMS1
PEDS1-UBE2V1
PEDS1
ORMDL1
NSL1
DDX19A
URGCP
SUN2
HNRNPD
ANAPC11
ALYREF
AGPS
YARS1
SRSF6
SCNN1A
S100PBP
NUP62
LTBR
IL4I1
ATF5
TTI1
SNX5
RPRD1B
MGME1
KIF15
KIAA1143
CRNKL1
CFAP61
ANKRD36C
AASDH
ZSCAN30
SEC11C
PCDH8
NUP160
RUSF1
PUM3
OSBPL11
FAM162A
CCDC58
WDFY1
SEC14L1
NEK2
NBPF1
RBM18
NSG2
MRRF
KNOP1
IQCK
HEXD
H4C4
H2BC6
CCDC174
BIRC2
ASNSD1
ASDURF
TOMM40L
POLE4
PLAG1
GZF1
FCER1G
EIF2B3
CHCHD7
C6orf62
APOA2
NUDT1
NOL10
MRM2
MAD1L1
WNK4
VPS25
TINF2
THOC3
POLR3G
P4HA1
MRPS15
MBLAC2
GTF2H2
GMPR2
GDAP1
FBXO4
DNAJB3
ZNF425
ZNF398
USP40
SSBP1
NCL
ZNF770
MARCHF7
GOSR2
FAM163B
EPHX2
UNC50
TRAPPC6B
TAMM41
SLC25A51
PNN
MYBL2
ENOSF1
COA5
APOC3
APOA1
UQCRQ
TMEM248
TMEM169
PECR
MANBAL
LSM12
LEAP2
GDF9
G6PC3
COPS4
ACAD9
RPL10A
RNF149
RNASEH1
PLA2G2A
MTHFD2
BIRC6
ANKAR
USP4
LAMTOR5
HCN2
H4C5
H2BC7
H2AC7
TUBB3
PPP1R11
POLR1H
PCF11
NSA2
NOP9
MC1R
INHBE
GRAMD1A
GLI1
GFM2
FEM1C
DHRS1
API5
PPP1R3E
NEU4
L2HGDH
DMAC2L
DEFB132
BCL2L2-PABPN1
BCL2L2
ARFGAP3
STOML2
SNF8
PIGO
KIF16B
FAM214B
CCDC83
BIRC5
SIT1
KRR1
CCDC107
ARHGEF39
ZNF296
VPS13A
TOB2
SLC25A13
SLC11A2
RRP15
PRRC2B
GINS3
GEMIN7
CRYM
ZNF461
TSPO
POR
NGDN
MNAT1
MLLT1
MCAT
LATS1
ENTPD6
CENPA