ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
CELSR3
HTR5A
GLRA1
RAB37
MTRNR2L2
EPHA10
L1CAM
CPLX2
MTRNR2L8
BARHL1
SST
CHGB
SCRT1
SNAP25
GDAP1L1
SLC12A5
NPPB
HS3ST2
MAPK8IP2
ANK1
RANBP3
TMEM181
PTPRN
SCGN
LHFPL5
SLC39A3
CHRNB2
SEZ6
HES3
DNAJC6
PGBD5
KCNK12
HPCA
CCDC92B
NTSR2
CHRM4
UNC80
OGDHL
AP3B2
SPOP
RBM28
NRSN1
PTPRS
SRRM3
ZFYVE27
CHGA
SCAMP5
GRM1
PIK3R3
GPR78
RNF130
KLF11
GCFC2
VWC2L
RPF1
MMP24
SCRT2
PLEKHM3
VGF
PDE1C
CDIP1
HMGA1
SEZ6L2
ASPHD1
SLC7A6OS
PRMT7
PMS2
AIMP2
KCNH6
HTR1A
TMEM179
STMN3
SCG3
CDC16
LEMD3
PDE4C
CCZ1B
MFF
G6PC3
ZNFX1
KATNA1
GTF3C3
NEURL2
CTSA
CYB5R4
S100A8
LOC112694756
SLC25A21
GPR6
MARCHF4
SVOP
PCNA
KDM3A
HDAC2
NME1-NME2
NME1
NDUFAF1
PET117
KAT14
CENPA
PTDSS1
MTERF3
INTS5
HEATR5A
SNRPB2
RFC1
H4C12
CRH
SRSF2
MFSD11
GPR158
SAYSD1
NPDC1
MNAT1
AATF
EPM2A
E2F6
SNRPB
N6AMT1
NMS
GOLGA8A
PRDX1
DTD2
EVI5
DDX1
UTP11
CPNE4
DNAJC11
LRIF1
GRIA2
TPH2
HRH3
HDAC4
PSMD3
MRPL39
H4C3
STK25
CCNC
CDCA7
ABCA3
SCFD1
MAT2A
DHDDS
ARFGAP3
WDR74
AKAIN1
PRMT5
TOMM22
RPL31
PAQR4
POLR2J3
ZBTB4
POLR2A
SRSF6
IKZF3
VPS29
RAD9B
STAT3
WTAP
SOD2
TOMM5
DNER
FAAH
TCFL5
SGTA
H4C11
IRF9
PMVK
CKLF-CMTM1
CKLF
GLS2
KCNB1
RNASEH1
UNC13A
XKR4
SLC6A5
PCSK1
TIGD1
EIF4E2
PEX3
ADAT2
PDHB
INSR
ANKRD34C
SLC45A4
HES6
GTF3A
FEM1B
SLC37A4
WDR36
CSTF1
AURKA
SNX17
EIF2B4
NUP54
CCDC88A
INTS12
GSTCD
DHRS2
C12orf57
RABGGTA
TRIM67
NXF1
TTI2
ID2
SEC14L1
AKAP11
RRP1B
HSF2BP
RAD50
H1-2
NDUFAF5
ESF1
DRG2
MC1R
CDK5RAP1
ANKRD36
EBPL
FMNL3
TAB1
PRKDC
MCM4
CLUAP1
ARL6IP1
HBQ1
SF3B6
FAM228B
ACTR3
POLR3D
LCLAT1
STX16
AP3S2
OPRM1
MED23
ZC3H7A
CPQ
EIF3B
CTNNB1
TTC26
GJA10
SRP19
NSFL1C
AARS2
GINS1
WDR45B
BSN
KANSL3
ZNF473
VRK3
TINF2
ACTL6B
CCDC107
TEFM
RUNDC3A
TSFM
GGACT
TSEN54
CASKIN2
HLTF
CNPY3
GINS3
SMARCD2
SNRPD1
LMCD1
STX18
TMEM186
PMM2
FAM237A
RPL27
SPAG4
CERS6
RUSF1
BAIAP2
CLVS1
MRPS15
HMGN3
NR1D1
EFTUD2
CCDC103
PRLHR
COG7
UGP2
VPS25
ALKBH2
SEH1L
ACSL6
RPS6
ZCCHC7
ABCC6
MLXIP
C4B_2
C4B
FAM177A1
MEST
MTF2
IPO4
POLE4
TBC1D13
LRRC37A3
ZNF165
CLN3
ZSCAN12
SLBP
NSUN5
PHF20
PRPF6
DGAT2
PSMD5
PTP4A2
SLC35A3
AXIN2
ZNF23
RIOK2
UBE2Q1
EIF4A2
YTHDF1
RPS7
BMS1
FAM227B
DTWD1
TEX14
RAD51C
CPNE9
H3C3
PCSK9
SDHD
NOP14
GRK4
ODC1
SIRT4
GARS1
CTXN2
HSPA1B
NRL
SMPD3
RSPH3
HHIPL1
CCDC85C
ITPRID2
NCBP3
RAB10
MRPL58
LRP2BP
ANKRD37
RPL10A
RMND5A
ZNF783
NDUFAB1
TIA1
LTV1
MED31
C17orf100
RBBP5
H4C4
REX1BD
DHX40
WDR35
IMPDH2
GRM2
SAR1B
GGA2
RTEL1
NUF2
TRIM44
COMMD1
TP53RK
AURKAIP1
FASTKD2
EZH1
BCL7C
H2BC17
H2AC17
EPB41L4B
MRPL21
IGHMBP2
SMIM12
LRRC59
DHRS4
TNFAIP1
IFT20
SLC25A10
MTIF2
SNAP47
JMJD4
ZNF624
NUS1
GRIN1
MRPL3
LRP6
POLR3E
HAL
USH1G
OTOP2
CMTR2
SPHK1
PSMF1
DPP10
PGRMC2
R3HCC1
ANKRD40
BICDL1
NDUFS7
RHOB
PRR3
GNL1
VARS2
DCLRE1B
AP4B1
KIF18B
FUS
NOC3L
TMEM268
LDAH
DAXX
TBL3
OSBPL6
TAF6
CNPY4
EBAG9
TAF5
TRAPPC6B
MRPL44
DLX2
PDCD2L
NEU1
SRARP
MRPL45
RBL1
RBM45
USP14
CALM1
TOB2
MAP1LC3B
FBXO31
ARL14EP
ATP5F1E
SYNJ1
KIZ
DDRGK1
C6orf136
CEP295
HSP90AB1
LANCL1
CPS1
RRN3
TM2D1
SLC7A6
TM9SF4
COPS7A
TOMM34
VPS16
PCED1A
G2E3
FAM98B
ACAD9
ESYT3
EAPP
RPS2
GLS
AP1AR
TOR1AIP1
CNTRL
C5
KCNH4
FAM163B
DRAM1
PEX5L
GRB7
CDH23
PSME3
ZNF292
CITED2
MRPS10
LONP1
CATSPERD
POLR2J
C8orf37
SHF
RGPD2
RGPD1
TATDN3
NSL1
TBCD
OSTM1
RPL13
NOB1
CCDC83
POLDIP3
C9orf24
RPLP0
NANP
RBM34
UQCC2
SLC25A36
SCAND1
ATR
POLR1H
DIMT1
TRIM33
ANO10
ABHD5
SNF8
PTGES3
NHLRC1
POLR2C
LATS1
DHRS4L2
SNAI1
SNRNP200
ISM1
TRMT2A
RANBP1
DIABLO
DUS2
DDX28
THUMPD2
PNPT1
WASHC2C
TCTEX1D2
TNFRSF10D
NOL7
VMP1
PTRH2
E2F3
DCP1A
ABCB6
FABP1
FAM83D
CCT4
EXOSC6
UQCC3
SERPINA11
LBHD1
H4C15
H4C14
TMA16
EIF2D
APOB
MCM6
ZCCHC3
MOB4
ZNF598
WDR6
UCKL1
H4C5
C19orf53
H2AX
MARCHF11
PSMD7
HSF4
ARFGEF2
SRRT
FAM53C
CDC25C
STEAP1
SCN3B
SPG11
ZGPAT
ARFRP1
H3C2
RAD9A
GATAD2A
CCDC117
NEPRO
PTCD3
POLR1A
DNMT3A
PIGL
C10orf88
VRK2
NUP62
IL4I1
ATF5
TSG101
NFE2L2
SSNA1
ANAPC2
CARTPT
RABL2B
TM9SF1
GADD45B
HUS1
SYNM
ITPR1
H4C2
H3-3B
OSGEPL1
DMAP1
MAN2C1
SPTSSA
CISD1
XKR9
LACTB2
CARMIL3
APOA1
NBPF1
ZNF571
ZNF540
SMC3
PLS1
MRNIP
SRP68
NDUFB3
FAM126B
NSA2
GFM2
HIBCH
DUS3L
DCLRE1C
RPL29
SGF29
AKR1A1
ABCF1
CCDC126
BOLA3
HBS1L
HERPUD1
UGT2B10
UTP14C
AKAP10
KRI1
CPPED1
USP42
XYLB
CACNG3
ZNF148
SHH
SCAPER
FAM133B
FDXR
TSEN15
AGGF1
SULT1A4
SULT1A3
UBL7
TOM1
BCL7B
BRMS1L
EFCAB13
CPSF1
NEK2
LOC110384692
C4A
DNAH14
KNOP1
MST1
TRIM25
NEK3
AK2
YIPF3
POLR1C
GLO1
U2SURP
HECTD1
SRSF5
DDX18
CTR9
DUS1L
LUC7L
NOL10
PSMB6
NAE1
AFF1
PGGT1B
TASOR
EIF3F
TACO1
PNN
DCAKD
UBOX5
FASTKD5
NMT1
COPS9
MRM3
GLOD4
HSPA5
MRPS34
EME2
CC2D2B
CFL2
ZFR
RXFP3
DRD2
BSX
NUDT3
PAQR7
MITD1
FANCL
SRP54
DPY19L4
RPS27L
TBX10
STT3B
PYGB
TMEM101
CCDC43
LCMT2
ADAL
TMEM222
PVALEF
AATK
AAR2
MAVS
NR1H2
TRDMT1
SETD6
SELENOW
ZNF264
HSPE1-MOB4
HSPE1
HSPD1
MEX3D
FBLL1
NPM1
SSBP1
CWC25
ZNHIT3
TMX3
CCDC102B
CRLS1
ANKRD36C
ARL4D
BFAR
RPS3
RCL1
RNF227
TMEM230
NELFA
ANAPC11
ALYREF
RPL5
ALDH7A1
SKP1
TTC5
HSPA1L
HSPA1A
GTF2H2C
GTF2H2C_2
PGAP2
SELENOP
ARSG
ZSCAN30
ZKSCAN2
PDCD7
NOP58
TFB1M
STK4
C5orf51
ALG10
NCAPH
THOC5
ADAM22
CCDC88C
NR1H3
ACP2
DNPH1
PDRG1
UTP3
SUPT3H
AIP
NID1
EBNA1BP2
CFAP57
MRPL16
AK3
OSBPL8
DGCR8
VAMP5
DDX19B
TOR1A
AARS1
PBRM1
GNL3
TTI1
RPRD1B
ZBTB8OS
RBBP4
RPS20
CLCN7
GTF3C6
XRN2
SUGCT
MPLKIP
CSE1L
CACYBP
PSMC4
CSNK2A1
LAMTOR5
C16orf72
RNMT
FAM210A
NFKBIZ
NHEJ1
LHX3
RPS15
ZNF878
LIG3
GNPNAT1
CABLES2
COX16
PARL
NCL
ZNF337
NAGK
ALG1
MSH5
TRMU
KCTD5
USP37
CNOT9
SMG1
DNAH7
RANBP2
CHCHD2
TRIP4
HNRNPH1
ALKBH3
MCCC1
MRPS31
KCNC1
ID1
GEMIN7
ZBTB40
MCAT
WDR70
EIF2AK3
CFAP20
PHYHIPL
EEF1AKMT1
RBM12
CPNE1
RCC1L
PAXBP1
SCG2
TMEM242
GINS2
H2AC19
H2AC18
PSMC3IP
IDH3B
YARS1
S100PBP
TMSB10
EIF4G2
ATOH7
PSMD8
FAM200B
TUBGCP3
GID8
DIDO1
SUPT7L
SLC4A1AP
SLC17A6
SOS1
ENO1
SULT1A1
LOC100287896
LIPT2
NDUFA10
VPS72
NGDN
CENPF
SLC44A1
TMEM106B
FTL
TOX4
RAB2B
MFAP3
FAM114A2
THADA
SRSF3
MTHFD2
KIF16B
MTCH2
ALDOA
RPL32
SCAP
RPL26L1
AJUBA
TMEM9
RIF1
FAM120B
AGPS
PLD6
TUT1
PGAM5
L3HYPDH
JKAMP
ATXN7L2
VEZT
FGD6
IMMT
MYH7B
GSS
TMEM97
ITFG2
H4C8
NOL11
YIPF2
TIMM29
ZNF3
TOB1
MARCHF7
PYURF
PIGY
HERC3
KLLN
FAN1
PDIA5
DCAF10
SDHAF4
BNIP1
ATP7B
ALG11
VPS33A
B2M
P4HA1
AP5S1
RAD54L2
STXBP5L
RNF187
RPS26
URGCP
UBE2D4
ERLIN2
MRPL19
GTF2B
OXA1L
TOLLIP
UBFD1
EARS2
TRMT61B
RNF40
GTPBP4
CCDC189
APLP2
GPN1
CCDC121
CD320
ANKRD54
POR
PRORP
PPP2R3C
EIF3L
PSMB5
TRMT6
RPS10-NUDT3
RPS10
MCM8
CBWD1
ZC3H6
PALB2
DCTN5
DHRS13
SH2B1
TUBB4B
CTSO
MDP1
MYBL2
COQ8A
MFSD4B
NET1
NUTM1
NOP10
VPS13A
TRIM8
MBNL1
VTA1
NMBR
ACSL3
SPRYD4
AMZ2
SLC25A13
ANKAR
ACOT2
ADAM17
KIF27
HNRNPA1
CBX5
HILPDA
PI4KB
HADHB
HADHA
UFL1
UBE2I
SLC35D1
NCOA3
DAGLB
AGFG1
SRFBP1
C15orf61
NUFIP2
POLG
LDHA
MIA2
ATP5MF-PTCD1
ATP5MF