ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478564 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◣ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

XKR7
NPAS4
IQSEC3
CELSR3
HTR5A
L1CAM
GLRA1
RAB37
EPHA10
CPLX2
SCRT1
MTRNR2L2
CHGB
BARHL1
SNAP25
SST
MTRNR2L8
RANBP3
HES3
MAPK8IP2
LHFPL5
SLC12A5
ANK1
GDAP1L1
KCNK12
TMEM181
MMP24
HPCA
NPPB
SRRM3
DNAJC6
SEZ6
NTSR2
GCFC2
SCRT2
PCNA
KDM3A
CHRM4
GRM1
LEMD3
SLC39A3
SCGN
CHRNB2
PTPRN
OGDHL
VGF
CYB5R4
SVOP
CDIP1
CCDC92B
KLF11
HBQ1
SLC7A6OS
PRMT7
NRSN1
HS3ST2
STMN3
WDR74
ODC1
RNF130
UNC80
PGBD5
PDE4C
HMGA1
ZFYVE27
BICDL1
IKZF3
PTPRS
SCAMP5
PMS2
AIMP2
PDE1C
N6AMT1
MFF
RFC1
CDCA7
PIK3R3
VWC2L
SPHK1
SEZ6L2
ASPHD1
SLBP
TRIM44
HES6
FUS
LCLAT1
SGTA
HDAC2
CHGA
PTP4A2
GRM2
TMEM179
DHDDS
TIGD1
EIF4E2
BCL7B
DNAJC11
TEX14
RAD51C
GPR78
NR1D1
EVI5
CPNE9
NOC3L
BCL7C
GPR6
AP3B2
GTF3C3
SIRT4
KATNA1
PAQR7
DIABLO
GJA10
SCAPER
RPL31
TPH2
RAMAC
H4C11
EFHD1
ZNF473
VRK3
H4C3
TINF2
USP14
RBM28
KCNH6
H4C12
SPOP
PET117
KAT14
RNASEH1
COPS6
H4C15
H4C14
NDUFAF1
LOC112694756
PRKDC
MCM4
PMVK
SMARCD2
LRP6
CEP295
C9orf24
MARCHF4
PTDSS1
MTERF3
GDI2
HRH3
E2F3
WDR36
PSMD3
TTI2
NEK3
SCG2
PODXL2
URGCP
UBE2D4
ARFGAP3
AATF
PLEKHM3
WTAP
SOD2
PDHB
TMEM268
RNF227
DHRS2
ACSL3
PRMT5
TMEM242
POLDIP3
HDAC4
AKAP10
MOGAT1
SLC45A4
TM9SF1
HCRT
TOMM34
FAAH
CRH
DDX1
RMND5A
NMS
SRSF6
SCG3
RAD50
MAT2A
SPAG4
ABCA3
SUPT3H
ARSG
TTI1
RPRD1B
LTV1
EPM2A
ESYT3
VRK2
UTP11
HECTD1
ZBTB4
POLR2A
ANKRD36
MRPL3
E2F1
TSEN54
CASKIN2
EIF4A3
DNER
EPHX2
ADCYAP1
H4C2
H2BC17
H2AC17
RSPH3
MED31
C17orf100
MTF2
TOB1
SEC14L1
CCDC88C
CENPA
C12orf57
CCNL1
CDC16
GTF3A
NANP
PHF20
GPN1
CCDC121
RIOK2
SNRPB2
ID2
DPP10
MEX3D
RTN2
S100A8
HTR1A
AIP
SYP
SLC25A21
RGMB
SEH1L
CTXN1
CC2D1A
C19orf57
LRP2BP
ANKRD37
UTS2R
FANCD2
NOP14
GRK4
RABGGTA
H4C4
ELOVL3
DTD2
FANCL
MDP1
GGACT
E2F6
CCDC107
PGRMC2
TMEM106B
NME6
CFDP1
NID1
DNA2
UNC13A
BSN
MVD
THUMPD3
HLTF
LRRC59
H3C2
NCL
RRP1B
HSF2BP
POLE4
RPLP1
HSP90AB1
ZNF337
ACSL6
CITED2
SNRPB
NSFL1C
H3C3
NAGA
TERF1
ZNFX1
CNPY3
RPS13
ZNF131
OSCP1
SRSF7
ATP5F1E
NBPF1
LRIF1
ZCCHC7
ANO10
ABHD5
ANKRD34C
CLVS1
ANKRD36C
NDUFS7
KIFC1
SLC25A10
C16orf72
NPRL2
CYB561D2
LONP2
ABCC11
POLR2J3
CCDC83
NAGK
PRRC2B
BRMS1L
PBRM1
GNL3
CERS6
ISM1
EIF2D
NELFA
TSPAN10
NPLOC4
ATP6V1B2
REX1BD
RAD9A
KRI1
DUS1L
NME1-NME2
NME1
MNAT1
INSR
H1-2
DHRS4
MRPL44
CMTR2
NPDC1
TEFM
HHIPL1
CCDC85C
SYNJ1
THNSL1
GLUL
GPCPD1
NDUFS3
KBTBD4
TASOR
SLC44A1
MCM3
EIF2B3
SLC25A3
SLC24A1
INTS14
EIF3CL
EIF3C
GRIA2
AKAIN1
XKR4
CTXN2
RPF1
PRDX1
EBAG9
EBNA1BP2
CFAP57
SLC3A2
NXF1
TIMM21
FBXO15
ZNF783
ANAPC11
ALYREF
HIRIP3
OPRM1
LUC7L
SPTSSA
RIF1
LMCD1
NUP62
IL4I1
ATF5
COX18
PNPO
CDK5RAP3
ZKSCAN2
KCNC1
CKMT1A
GATAD2A
CISD1
KANSL3
ZNF579
FRA10AC1
CDK5RAP1
METTL2A
CKLF-CMTM1
CKLF
CNTRL
C5
STAT1
TMEM14B
ID1
GINS2
SPRYD4
CALB1
FEM1B
MYBL2
COA7
GOLGA8A
UCKL1
DLX2
NR1H3
ACP2
ALG1
TUBGCP3
FTL
RTL10
GNB1L
FOXJ3
KIAA1586
DDX5
H3-3B
STX16
ZC3H7A
ABCC6
CCDC117
P4HA1
LDHA
KIF2A
G6PC3
MIA2
CCZ1B
ABCB6
EFCAB13
PHF1
TANK
CTNNB1
SRSF2
MFSD11
PSMF1
SCFD1
MLXIP
CALM1
GEMIN7
GID8
DIDO1
MAP2K2
MOCS3
DPM1
NOLC1
TFRC
C7orf25
TMA16
GINS3
DUS2
DDX28
H2AX
CPPED1
FBLL1
EPOP
POLD2
ZNF629
DDIT4
RTTN
ZNF628
ELAC1
CENPS-CORT
CENPS
PITRM1
ATIC
RPL27
VPS29
RAD9B
KCNH4
CD320
ZNF248
TXNDC5
C10orf88
DDX56
C17orf75
INTS12
GSTCD
CPNE4
ZCCHC3
GLS2
PRLHR
SAR1B
MARCHF11
MSH5
UBE2S
SMAD2
KCTD13
ACY1
FAM133B
PNN
RUNDC3A
SLC35A3
HSPA1B
FAM163B
LTA4H
CPSF1
COQ8A
ZNF770
H4-16
EXOC2
HNRNPAB
TP53RK
TRIM67
VCPKMT
THUMPD2
NDUFAF5
ESF1
NSUN5
TRIP4
SUPT7L
SLC4A1AP
PYURF
PIGY
HERC3
UGDH
YTHDF3
RPS19
HEATR5A
DCLRE1C
DUSP7
ARL17B
ARL17A
ERCC6
ACAD9
ACTL6B
ZNF280D
ANKHD1-EIF4EBP3
ANKHD1
UBE3B
CPQ
ITPRID2
NOL10
H2AC19
H2AC18
EIF2S2
RBM18
MRRF
PPP1R3C
OTOA
PKM
ELOVL1
KRR1
DUS3L
TACO1
DCP1A
UBE2Q1
GGA2
SMC3
PSMC3IP
TIPIN
TIMM44
TOMM5
NOL7
AAR2
LDAH
SNF8
SMAD5
RPIA
CNPPD1
BIRC6
CLCN7
NQO2
CAMTA1
RANBP2
RPL10A
MRPL27
EME1
SNRPD1
SRP19
DHX40
C19orf48
JPT1
ZNF487
MBTPS2
CDIN1
NPM1
MCAT
FAM120B
GOT2
OR1E1
GFI1
OPA1
CSTF1
AURKA
COPS7A
FABP1
TBCB
POLR2I
NFATC3
MAPKAPK3
CISH
IGFBP4
NEURL2
CTSA
EBPL
AARS2
MRPL58
XKR9
LACTB2
HINFP
MIS18BP1
KIAA1191
FERMT1
TPRA1
MCM2
MGST3
PSTK
STK25
DGAT2
PCSK9
GTF3C6
MTHFD1
TEAD3
EIF3B
RIOK1
CAGE1
HESX1
APPL1
TGOLN2
CPE
LONP1
CATSPERD
IPO7
NET1
TAF3
TMEM116
ERP29
HAUS4
TCF25
TGFBI
LAPTM4B
WDR11
NHEJ1
CETN3
STX18
PIGL
TBC1D19
STAU1
DDX27
HASPIN
EPB41L4B
UQCC2
PNPT1
AMZ2
FLOT1
PYCR1
CCNC
GTF2H2
GTF2H2C_2
HNRNPH1
MOB4
TOB2
POR
TJAP1
UBE2V2
GOLGA4
KIAA1958
C9orf147
C4B_2
C4B
WASHC2C
USP42
LOC110384692
C4A
SRP54
GDAP1
PLLP
FAM227B
DTWD1
IDH3B
USP4
ZNF747
LNPK
GPX1
FAM151B
BTBD10
ARL6
CALM2
RHOB
TSN
FAM83D
RPL5
FGFBP3
YIF1A
SMIM26
RPL3
HAAO
PTPRK
PTPN2
AVPI1
ANKRD39
GTF2H2C
SRFBP1
KCNB1
ATXN2L
USP30
EAPP
SLC25A36
KLLN
MRPL17
PTEN
FOXRED2
FANCA
GUCY1A2
CNGA3
MVK
AXIN2
PUM2
SLC35F5
METTL2B
ZNF391
RPL21
TSEN15
AK2
SRSF1
LTBR
C16orf95
SLC39A4
UTP4
TIAL1
FN1
EDC4
DERPC
CHTF8
NUP54
EIF4A2
EZH1
SCAND1
DPY19L4
LHX3
NUP50
PC
CDKAL1
PDP2
PIGF
CRIPT
DIP2A
SFI1
MCL1
EDEM2
ECSIT
DNAJB2
TTC21B
ARL6IP1
PSME3
PLEKHG4
TRIM27
FAM219B
SELENOP
TCFL5
RUVBL1
MTIF2
PRR3
GNL1
AGPS
EEFSEC
TUBA1B
SPRYD3
FOXQ1
NGDN
TMEM230
USPL1
HMGB1
PLD6
SNRNP70
AKAP11
RPE
MC1R
TAF15
DAXX
SLC25A13
PDS5A
CBFB
MAT1A
PIMREG
ZNF195
YWHAQ
PGLS
DLK1
DBI
C2orf76
PEX3
ADAT2
H4C5
RFC5
COMMD2
TBC1D13
ASNSD1
ASDURF
ALDH7A1
TRMU
UBB
TIMM22
CHEK1
COMMD4
ZNF219
ACIN1
ANKAR
CDKN2AIPNL
ATP5F1B
ZC3H11A
TTC7A
MCFD2
PDE12
BMS1
VARS2
MRPL45
XRN2
C2orf73
UTP18
MBTD1
HM13
TTPAL
AGMAT
JAGN1
ATP5MC2
TMEM9
BAIAP2
MARCHF8
ZNF292
KANK1
METTL3
EIF3A
UCHL5
RO60
NUP93
EEF1AKMT2
CUL4A
MCM6
MPI
POLR1F
PDIA3
PSMD7
NEPRO
SUGCT
MPLKIP
CSE1L
YARS1
S100PBP
SLC17A6
PM20D2
GZF1
C16orf46
PSMD14
NSG2
BCDIN3D
STAT3
MRPS18C
HELQ
DMAP1
FMNL3
ARHGAP32
VPS13A
ACOT2
EEF2K
C5orf24
LAP3
MTHFS
SLC25A28
B3GNTL1
KRTAP3-1
VPS52
RPS18
LUC7L3
SECISBP2
ELF3
RNF6
LARP1
LAMP1
MITD1
LAMTOR5
TBCD
RPS15
TRA2B
PPP1CB
MSH6
SUGP2
ARMC6
SUMF1
ZNF367
PFN2
ADK
MAN2C1
TDRKH
PTGES3
MSH2
AGK
GTF3C4
DDX31
WDR55
ZNF92
TTC30A
PHOSPHO2
LSR
GADD45A
DYNLRB1
CCDC173
SF3B5
IPO4
RPS7
RAP2B
RAB3C
GINS1
COG7
ZSCAN12
XYLB
TRDMT1
RAD54L2
PRORP
PPP2R3C
CLN6
XPO5
POLH
PCNX4
TOP1
DPY30
ASXL2
AHCTF1
ZFAND1
VAMP4
CYCS
MSL2
ZNF286A
CWC25
TRIM28
RBBP6
SLIRP
ALKBH1
REXO5
ERI2
TNKS2
OXSM
NGLY1
ZNF593
EIF2AK1
C1orf232
ASAH1
COPS4
CCDC88A
TMEM186
PMM2
NHLRC1
NOP58
PGAM5
STXBP5L
ACYP2
IARS1
MTMR2
CEP68
UBC
RIOX1
PPP1R8
PLOD1
MCM7
H2BC8
H2AC8
AP4M1
AP3S2
PGAP2
NUFIP2
TMX3
CCDC102B
RGL2
MAPK14
RINT1
POLR2C
FAN1
DHODH
NEK9
MLH3
TTC9C
HNRNPUL2
ARL5A
SPG11
RETSAT
POLR3D
WDR45B
LATS1
COPS9
TFB1M
TMSB10
GOPC
DUSP28
ANKMY1
CDKN1A
THUMPD1
GOLGA7B
DARS1
PRPSAP1
BCL6
RNF19A
SLX1B
SLX1A
BOLA2B
BOLA2
DRAM1
BLCAP
AMD1