ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: NKX3-1 | STRING
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◣ NKX31: STRING

VEGFC
TWIST1
TMPRSS2
RAMP1
AUTS2
MSX1
NPAS4
XKR7
IQSEC3
KRT4
CELSR3
HTR5A
MTRNR2L2
RAB37
GLRA1
MTRNR2L8
L1CAM
EPHA10
MYPN
RPF1
CPLX2
UGT2B10
ANP32E
DNPEP
BARHL1
UGT2B11
CHGB
TASOR
SCRT1
UGT2B28
SST
SNAP25
CCZ1B
PNLIPRP1
TNFAIP1
IFT20
SLC25A26
TMEM9
RANBP3
SLC45A4
GDAP1L1
SLC12A5
C14orf93
KRT10
HES3
KIF18B
MAPK8IP2
NPPB
ANK1
LHFPL5
TMEM181
LRP10
CDK5RAP2
UTP14C
EIF2B5
SNX17
EIF2B4
SEZ6
KCNK12
UNC80
HPCA
FEM1B
DNAJC6
PMEPA1
HS3ST2
PTPRN
SLC39A3
SCGN
NTSR2
CHRNB2
OTOR
NGDN
MMP24
SRRM3
SEC14L1
CHRM4
CYB5R4
ZFYVE27
GCFC2
GGACT
OGDHL
CCDC92B
SCRT2
GRM1
PGBD5
KRTAP3-1
SLC37A4
NUP210L
NRSN1
CENPF
VGF
KRTAP20-4
TTC21B
KLF11
CDIP1
LEMD3
RNF130
ASPH
SDHD
WDR74
PCNA
SPOP
RANBP2
PTPRS
ESR1
SLC7A6OS
PRMT7
NUDT3
RPL27
KDM3A
MAP4K5
ATL1
MFF
SCAMP5
PIK3AP1
STMN3
LIMCH1
GLYATL1
HMGA1
CYP3A43
SVOP
HK1
PIK3R3
TP53RK
NDUFAF1
VWC2L
PDE1C
PDE4C
KLRC4-KLRK1
KLRC4
PMS2
AIMP2
FRK
CHGA
AP3B2
USP54
SEZ6L2
ASPHD1
CIAO3
PAX6
GTF3C3
RBM28
UGT2B15
GPR78
RPL10A
SLC36A4
ZNHIT3
S100A8
MTF2
ACKR4
SPIC
TPH2
TMEM179
PTDSS1
MTERF3
NME1-NME2
NME1
DNAJC11
JAKMIP2
DHX8
GALNT12
PSMD3
YOD1
PFKFB2
NXT2
H4C3
SAE1
CLDN8
FEZF1
LRP12
HBQ1
SGTA
NUP54
RFC1
KCNH6
NOP14
GRK4
ANKRD28
CTXN3
PLEKHM3
CCNC
IKZF3
N6AMT1
BCL7C
LEPR
HDAC2
SLC25A21
PNLIPRP3
TTI2
CYCS
GALNT18
TMIGD1
NEDD4L
H4C15
H4C14
MBNL1
INTS5
KATNA1
ODC1
CDCA7
ATG2A
MNAT1
SMG5
CCZ1
GPR6
SNRPB2
ZNF473
VRK3
MUC15
NDUFAF5
ESF1
CITED2
PKP1
SF3B5
CLDN10
PTP4A2
SIRT4
SCG3
CCDC107
RAD50
HTR1A
LRIF1
LOC112694756
TXNRD2
POLR2J3
WDR36
TRIQK
SPINT3
UTP11
SMARCD2
INTS12
GSTCD
BICDL1
STX18
MARCHF4
HES6
PRDX1
PDE12
DHDDS
PRMT5
AKAP11
VPS29
RAD9B
PET117
KAT14
EVI5
CDC16
UTP3
GABPA
ATP5PF
H4C12
DBI
C2orf76
MRPL27
EME1
MSL2
BCAR3
RGPD2
RGPD1
TIGD1
EIF4E2
ATP5MC3
SNRPB
LCLAT1
MRPL3
EIF3F
CMTR2
SLBP
H4C2
AIF1
H3-3B
DYRK4
RWDD1
STAT3
PPIP5K2
GIN1
CHCHD2
LNPEP
CDK5RAP1
RPL31
OPA1
YTHDF1
MCM6
GTF2H2C
NUF2
SPHK1
ADK
TRIM44
AATF
ZNFX1
POLDIP3
ZNF547
TRAPPC2B
CCDC17
NXF1
H4C11
CRH
IPO4
TFB2M
LRRC36
GTF2H2
CNST
PEX3
HRH3
GRM2
FUS
ADAT2
PIGL
CUL1
VWA2
CENPA
H2BC17
H2AC17
CSTF1
AURKA
RNASEH1
SIVA1
SCAMP4
NR1D1
ADAT3
ADAM22
RPS7
PMVK
EPM2A
TEX14
RAD51C
GJA10
TLE4
SRFBP1
NMS
SDHAF3
ARFGAP3
PUS10
HDAC4
DDX1
G6PC3
MTR
CPNE9
VTA1
NMBR
CTNNB1
WTAP
SOD2
DNAH5
COX16
TINF2
PRKDC
MCM4
PDGFB
MAT2A
ABCA3
TOMM5
CCNT1
PDHB
E2F6
GTF2H2C_2
EBAG9
SRSF6
AP3S2
FAAH
METTL2A
ITFG2
NOC3L
DRG2
ZBTB4
POLR2A
DHRS2
DTD2
NUP205
DAAM1
PBRM1
GNL3
RIOK2
VPS25
RPL38
NEURL2
CTSA
BCL7B
DNER
PHF12
TRMT2A
RANBP1
BAG6
ADAM15
ASAH1
NPDC1
SNRPD1
RPE
ME1
RPS6
TBC1D19
GOSR2
GALK2
COPS4
TIMM21
MAP3K7CL
FBXO15
SRP19
RBBP8NL
DIABLO
TM9SF4
IFT43
ZBTB45
H4C8
CYTH1
BMS1
GTF3A
USP14
SSR3
C12orf57
NSUN5
NDUFS7
KRR1
EFTUD2
CCDC103
ANKRD36
METTL2B
SRSF2
MFSD11
B2M
TRIP4
TAF5
MRPS10
LRP6
HEATR5A
RABL2B
DUS3L
TACO1
SCAPER
ID2
CLUAP1
C10orf88
PAQR7
GRIA2
UNC13A
FAM133B
TOR1AIP1
SPAG4
RABGGTA
FAM98B
CEP295
TSEN54
GOLGA8A
CASKIN2
UCKL1
CBFA2T2
PSMF1
PSMD8
NOL11
COPS7A
TTC26
TSFM
SPG11
AKAIN1
C15orf61
NOL7
C9orf24
TATDN3
SLC44A1
NSL1
RMND1
MRPS18C
HELQ
ARMT1
ANKRD34C
TMEM106B
TMA16
RRP1B
HSF2BP
TMEM268
SF3A3
RMND5A
PRCC
VPS52
SELENOH
RPS18
FARSB
ARL14EP
VMP1
PTRH2
PGAP2
CCNL1
AIFM2
ALKBH2
INSR
SLC22A10
MITD1
E2F3
CPNE4
SLC13A1
LTV1
ACAD9
XKR4
SCFD1
IRF9
DCP1A
PAXBP1
NDUFS3
KBTBD4
EFNA4
RSPH3
PHF20
BSN
SEH1L
PNN
DHX36
DCLRE1C
TMEM167B
TRPM1
OSGEPL1
TOMM34
SF3B6
MED31
FAM228B
EFCAB14
C1QTNF9
C17orf100
STAU1
NSFL1C
HLTF
DDX27
CKLF-CMTM1
CKLF
H1-2
DIS3L
CNTRL
RAP2B
BAIAP2
RBBP5
PRRG2
NOSIP
H4C5
DMAP1
WDR11
CXCL2
CFAP92
ZCCHC3
POLR3E
NEK3
CNPY3
RPLP0
SAXO2
ESYT3
EFL1
ZNF219
STK25
KLRC2
EFHD1
LRP2BP
ANKRD37
ADIPOQ
RAMAC
POLE4
HNRNPH1
GPR158
GLS2
ACSL6
H4C4
CCDC181
YIPF2
TM9SF1
TIMM29
RPL35A
MRPS23
IQCG
CXCL13
COPS6
C1QTNF1
AURKAIP1
MCM3
KRTAP9-6
AKAP10
IQGAP2
DPP10
CLVS1
AAR2
ZCCHC7
TLE3
TEFM
OPRM1
EIF2B3
MAN2C1
RNF227
HSPE1-MOB4
HSPE1
HSPD1
CERS6
C2CD5
TMEM230
LAMTOR5
H3C3
SCG2
SAYSD1
RIF1
VRK2
TOGARAM1
RPS26
KLHL28
RPLP1
PRDX6
KIFC1
U2SURP
TRIM67
PGRMC2
MTHFR
TBCD
LRRC59
URGCP
UBE2D4
STX16
POLR3B
NANP
TRAPPC6B
TMEM242
KANSL3
ZC3H7A
SHC1
GARS1
CKS1B
ACIN1
RPL23
LMCD1
HECTD1
RPL37
MRPL1
EMC4
SELENOP
PRPF6
KCNB1
TCFL5
SCAF11
ARSG
SUPT3H
RUVBL1
CALM2
ACSL3
NDUFA4
MOB4
HHIPL1
CCDC85C
ZSCAN29
ZNF391
WWOX
TUBGCP4
TTI1
TMED1
RPRD1B
NUP107
GAPDHS
DCAKD
ZNF106
CTXN2
VCPKMT
REX1BD
ZGPAT
SLC25A10
RPL22
HSP90AB1
GINS3
ARFRP1
ZNF22
PODXL2
CREBL2
COPS2
BFSP1
TARS1
PPRC1
ZNF335
RPL29
KDSR
RUNDC3A
PROSER3
CPQ
NUFIP2
EBPL
DHRS4
ATP5F1E
ABCC6
ZNF783
RTTN
FBXL17
ERLIN2
BATF
ACTL6B
ZNF3
MLXIP
C9orf85
ABHD17B
TMX3
RGPD6
RGPD5
CCDC88C
CCDC102B
AMTN
PGC
TJP2
PRLHR
MEX3D
USE1
RFC5
PAQR4
MRPL44
MARCHF8
EIF3B
AARS2
H3C2
NDUFC2-KCTD14
NDUFC2
GEMIN2
MOGAT1
IKZF5
FANCL
COMMD2
ARAP2
ANO10
ACADSB
ABHD5
UBOX5
SYNJ1
FASTKD5
ARIH1
ALKBH3
TOB1
SLC6A5
SCP2
RBM25
MC1R
AIP
TDRKH
SLC35A3
RAB3C
MAVS
CRLS1
CDK12
CCDC83
C12orf43
RPL21
MRPL19
ARL6IP1
H2BC5
PARL
HASPIN
CCDC88A
FDXR
C18orf21
ATXN2L
USP30
RNF19A
ISM1
HSPA1B
TSNAXIP1
RANBP10
NDUFA5
NBPF1
GPN1
CCDC121
C19orf53
UBE2Q1
EIF2D
COL16A1
FMNL3
RDX
NID1
TOMM22
SAR1B
MTNR1A
FASTKD2
ZBTB8OS
SRSF5
RBBP4
ITPRID2
HMGN4
CDKL3
BTG1
RAD9A
DLX2
DGAT2
APTX
TSNAX
DDX18
RETSAT
DHX29
CTR9
C4B_2
C4B
ARHGAP32
RGL2
PCSK9
NCL
MDP1
INO80C
C5
C4orf51
ANKHD1-EIF4EBP3
ANKHD1
RPS13
NCOA7
COX7A2
BRMS1L
ZNF337
MAPK14
KRI1
GGA2
CALM1
POLR3D
MRPL58
EIF4A3
HEPACAM2
GINS1
DHX40
ANKRD36C
USPL1
PARP2
MVK
HMGB1
SMN2
SMN1
FAM227B
DUS1L
DTWD1
ATF3
TSSK6
RBM34
NDUFA13
LIMA1
CCAR2
AXIN2
WDR45B
TAF15
POLG
CTXN1
NUP62
IL4I1
DIPK1A
ATF5
SPTSSA
NREP
NELFA
GDI2
EIF4A2
CCDC59
TBC1D13
MED23
KCNH4
GATAD2A
C16orf72
ERP27
AEBP2
MANBAL
LDAH
GRPEL1
NME6
NAGK
FAM163B
CISD1
TMEM186
PMM2
LUC7L
KRTAP3-3
ABCB6
ZC3H10
RINT1
EPB41L4B
DUS2
DDX28
ZNF571
ZNF540
UTS2R
SMG8
DNA2
COG7
CCDC117
ADD3
SQSTM1
NAT1
SSH2
SERINC3
MESP1
FAM200B
NOL8
H2AX
CENPP
ANAPC11
ALYREF
ZSCAN12
TMCO1
MARCHF7
EBNA1BP2
CFAP57
ZNF131
MID1
MCCC1
ZSCAN30
THUMPD2
EZH1
ZSCAN25
SCNM1
NR1H2
MARCHF11
LYSMD1
ZKSCAN2
RPS3A
RHOB
POLR3F
LTA4H
DZANK1
MPI
EFCAB13
CPPED1
CLU
CC2D1A
C19orf57
TOB2
SNF8
SMG7
NDUFB7
ASNSD1
ASDURF
SNAPC1
NPRL2
NAGA
MTIF2
MRPS31
KAT5
CYB561D2
RPS20
IMPDH1
CYP21A2
UGGT1
TBC1D9
TAF1B
PRR3
PPIL3
OGT
NIF3L1
LONP1
ITGB3BP
GNL1
EFCAB7
CATSPERD
NUP153
MVD
KCNC1
GTF2B
DDX19A
C2
ZNF23
NR1H3
DPH6
ACP2
HEXIM2
FBLL1
FABP1
EXD2
ELOVL3
DAXX
CPSF1
RNMT
FAM210A
EAPP
DNAJB12
ZNF274
VARS2
UQCC2
SLX1B
SLX1A
ID1
BOLA2B
BOLA2
ZNF286A
SMC3
PSEN1
HSPB6
GINS2
FAM177A1
CCDC174
ALG1
GOSR1
DEFB132
PNPT1
NRL
MTAP
ACTR3
TYW3
TUBGCP3
OSCP1
NEK2
NAT10
MRPL45
MAPRE2
CRYZ
ATF6
WASHC2C
SLC25A36
RUSF1
PSME3
LONP2
FTL
FAM107B
DESI2