ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652957 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◣ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
ZNF76
POLR2J3
ZNF143
HSPE1-MOB4
HSPE1
HSPD1
GDA
ATXN7L2
DRAP1
C11orf68
DUX4
NR4A1
FAM53C
CDC25C
HYAL2
FRG2C
DAGLA
KRT34
IL7R
MTRNR2L1
ARRDC4
PDXDC1
C11orf86
ERCC1
PSMC3
OTULINL
HNRNPA2B1
CBX3
C5orf51
CSGALNACT1
NEK2
PTGES
OR10D3
BCAS1
TSR3
GNPTG
SLC35E2B
LIPK
CALM2
ZNF687
CD55
MARCOL
RCOR3
ATF3
SETD1A
NNMT
RPN2
MROH8
FGGY
SRI
HHIPL1
CCDC85C
LAMP1
RAPGEF1
SS18L1
PSMA7
WASF2
CCDC59
SFSWAP
TBL1X
CARD16
PHKA2
DNAJC11
TXNRD1
UBE2B
CDKL3
ATG101
RIN1
HMG20B
FOS
ASB2
RIPOR2
TSN
GPR137
BAD
PDE4D
PPP1R13L
POLR1G
STX16
SLC39A13
CPA4
SNX15
CUL2
BIRC3
HARBI1
ATG13
DYNC2I2
GTF2IRD2B
PPP5D1
CALM3
CDON
GKN1
LOC388282
KIFC3
IER3
FLOT1
TSC1
GFI1B
DKK1
MRPL48
GLIS1
SLC25A25
NAIF1
EIF2D
NAGPA
CALM1
SUMF1
CRBN
TXNIP
YY1AP1
DAP3
FHL2
PMVK
PAIP1
COQ7
H4C12
MFSD12
SENP1
PFKM
GBA
XPO7
WDR74
GFM1
TSFM
COA6
ATP6V0C
HES1
CYP1B1
BAZ2A
WDR43
NADK2
H4C15
H4C14
CLTC
SLC25A29
MAZ
ZNF341
KLRC2
RAB22A
BRIX1
PDK4
ZDHHC6
VTI1A
CETP
SAMD9
SLC39A10
UBQLN1
BIRC7
S100A16
KRT80
LIFR
ARID2
BZW2
ANKMY2
SEPTIN7
PTP4A1
PRKCZ
PLAU
IL24
TNRC18
NR6A1
PPIB
OAS1
PPP1R2
FAM156A
EIF3F
SPNS1
CMSS1
GIPR
ITPRIP
GTF3C5
TAGLN2
NYX
AP1G1
DOLPP1
TIMM22
CITED4
WARS2
ROBO1
KIF27
GCN1
IQCH
AAGAB
PLIN3
GNAS
S100A2
DNAJB12
WDR25
WARS1
PXK
LRRC37A3
ATL2
AGAP11
ADIRF
LMNTD1
CHD2
DGAT2
LSG1
NRAS
PARK7
CD59
TMEM185B
GPRC5A
AMDHD2
POC1A
LIMS1
TRUB2
COQ4
BRPF1
KMT2D
CWF19L1
MGAT5B
UBB
CDH13
TSR2
CDCA7L
ARFGAP2
CDKN1C
ZNF408
ARHGAP1
LANCL2
MEF2D
HNRNPF
ISY1-RAB43
ISY1
OSMR
CDIN1
EIF4A2
WASHC2A
RIMBP3C
RIMBP3B
WDR70
FBXO46
SYBU
H1-2
PER1
ZNF335
CHMP7
KLF1
GCDH
BLM
FAM156B
USP15
TEKT2
ADPRS
PLCXD2
PUS10
PEX13
BRWD1
FCHSD2
CNOT6
NMUR2
DDX17
TIGD5
EEF1D
SURF6
ASPSCR1
ZC3H6
EIF3C
SRSF3
CDKN2C
WDR13
NUP155
SSBP1
MARCHF6
GIT2
ANKRD13A
KPNA7
DPH7
NBN
WDTC1
PTCD3
POLR1A
S100A13
CHTOP
SSNA1
ANAPC2
UBC
C19orf33
LIN7C
ALG1
LRPPRC
COA1
NOL8
CENPP
ASB6
HNF4A
SLC48A1
ERICH4
DMAC2
ETS1
FOSB
FUT11
H3C15
H3C14
H2AC19
H2AC18
MYEOV
STRBP
EIF2S3
ZNF668
ZNF646
VPS33A
KRT8
VPS50
HEPACAM2
TRMO
HKDC1
RBM24
MSLN
ATAD2
RPL26
PLEKHA8
PLEC
STK17A
RBM8A
GSG1
DUSP5
SPRING1
RNFT2
CDIPT
FBXO4
TSKU
VGF
STPG3
NELFB
ICE1
TMEM9
INAVA
SERTAD4
TADA1
POR
SURF4
DDX46
CDK9
PI3
IBA57
ZFAND3
BCL6
MAOA
DNAJC9
POLR2J
PARVA
ATG16L2
SPATA46
C1orf226
PRRC2B
KAT5
RELA
SLC25A53
SLC6A18
TRIM44
YAP1
MYL12A
TMC5
PDZK1
CIDEC
PPOX
CLCN7
CDK5RAP2
NUF2
SH3BP4
TRIB1
LY6K
TMCC1
GABARAPL1
PLAAT2
ROBO3
ATF7-NPFF
ATF7
EIF1AD
BANF1
CENPN
SLC20A1
E2F8
ELFN2
NUDT3
TRAM1
PHF19
PDHA1
SMG7
PHF1
TES
ITGB3BP
EFCAB7
POLR3B
C21orf91
AAAS
THEM4
HRH1
CCL20
CLPB
GSN
USP2
WNT1
AMOTL1
ARHGAP17
SPINK1
TMEM170A
PTPN6
C12orf57
PRDM11
FANCD2
COG2
OGA
INKA2
DDX20
CCNT1
CCT5
ATPSCKMT
ALDH18A1
RPL37
DDX5
ACCS
ZNF219
TMEM253
AVPI1
LOC102723996
ICOSLG
LMNA
SZRD1
GPATCH3
ULK4
STX1A
JRKL
CCDC82
RASSF9
ZFX
PIMREG
RAPGEF3
SMC3
HERPUD2
PIGO
AFF1
RFX1
CIZ1
FAM76A
TAS1R1
NOL9
AGTPBP1
KRBA2
CSTF1
AURKA
PMPCA
ENTR1
TCERG1
STK35
H2AC16
H1-5
DNAJB1
H3C11
MYL12B
LOC112267881
KIR2DL1
ETV6
H4C8
GYPC
SLC7A5
IRF2BPL
RALGDS
ZBTB26
COMMD6
ILF2
PDE6D
COPS7B
SEMA3B
TRIP13
BRD9
CYCS
CCDC97
ECT2
ZSCAN32
ZNF174
ARAF
TSEN54
CASKIN2
CFAP20
PTGER4
CCDC124
TERT
EDC4
HAGH
FAHD1
SLC8A1
PYGO2
LOC101928120
AKIRIN1
IFT52
PRSS27
NOTCH2
SRSF4
APOLD1
NUP160
GATA2
NR2F2
OXR1
LRP6
INTS7
DTL
TMEM107
RSAD1
CENPH
RXYLT1
FUS
NDUFB1
CPSF2
ARID3B
RNF103-CHMP3
RMND5A
DTWD2
BNIP1
MRPS18B
FAM102A
ISG20
PPP1R37
PTGES2
STX18
DPY19L4
NQO1
HPDL
POLA1
KNTC1
RPLP0
MRPL27
EME1
NVL
PFKP
LIMA1
SYNC
HR
SLC33A1
USP36
INA
SIRT4
MRPL21
IGHMBP2
PLD6
SP1
PHF23
GABARAP
NCOR2
MCOLN1
MARK1
DNM2
CNEP1R1
NFX1
NR1D2
NKIRAS1
HDGF
ZC2HC1C
ACYP1
SREBF1
H3C12
H2BC17
H2AC17
CLN3
APOBR
VPS13C
C2CD4A
TACC1
JUNB
PPEF1
EBAG9
POLD2
CDKN1B
CKAP5
PPIL4
DISP3
PRR5L
AURKAIP1
SKA2
PRR11
ADK
UBE2C
SNAPC5
HAX1
UQCRC2
HNRNPH1
WDR5
HSP90AA1
RDH5
ITGA7
BLOC1S1
SYT7
TGM2
H2BC5
H1-4
HEXIM1
SCAND1
JUND
CLPTM1
RHOBTB2
CDC14C
CRIP1
TEDC1
ATAD3B
NDUFS3
KBTBD4
NME1-NME2
NME1
ZCCHC4
SCRIB
PCBP2
WASHC2C
SDE2
THUMPD1
PIP5K1A
COMMD9
PRKCI
SLC35B1
FZD1
HMGCS1
TEX12
IL18
GUCA2A
PPP3CB
DMPK
JMJD1C
EFCAB2
USP9X
NRM
PPP1R18
MIA3
CENPS-CORT
CENPS
SAMD4B
KIF1C
INCA1
TMEM41A
DICER1
RPS26
CKAP2L
OXCT1
ATP8A1
SIRT1
SAYSD1
ATR
TEAD1
P4HB
NARF
ALG10B
CACTIN
ZNF239
HIF1AN
UBE2I
PTDSS1
MTERF3
SLC41A3
LPIN1
RUNX1
MAP2K1
MXRA7
SLC2A6
POLR1H
SREK1
FRMD3
CBLC
MRM3
GLOD4
NDRG1
SLC35F5
ZFYVE26
RAD51B
ARL8B
KLHL15
MBTPS2
NAP1L4
UNC5B
SYNRG
TM4SF19
ZNF131
HEMK1
C3orf18
C8orf33
ACOT9
MAD2L2
TARS1
LOXL4
CD99
NAPA
CPA2
VPS52
RPS18
TTLL6
RAD9A
B3GALT4
GTPBP3
ANO8
LMAN2
C1orf198
DDX18
KIF21A
USP49
PREPL
CAMKMT
RPGR
CDC73
TLE1
RPL17-C18orf32
RPL17
C18orf32
NDST2
COPS7A
SRSF6
RTF2
JPT2
ZFAND4
RAB27B
MGLL
CCDC34
TMEM267
TOB1
MEX3A
MRPL33
RBM48
PEX1
RAD51AP1
C12orf4
UBIAD1
SRXN1
BBS1
RBBP5
HSD17B10
PRDM10
CEP63
ANAPC13
STK19
DXO
DEDD
NIBAN2
PSMD4
NOL11
MKRN2OS
MKRN2
MAPKAPK3
CISH
SLC44A1
PIP5K1C
SLC25A45
FRMD8
U2SURP
TPM4
FAF1
RANBP2
RPL13
NPW
CNTRL
C5
RRP1
CTR9
PSRC1
MMP24OS
MMP24-AS1-EDEM2
UBP1
TBC1D10C
PPP1CA
PUF60
KRT7
RXRA
SLC25A10
LPCAT3
GUK1
ZNF212
RHOT2
TMEM222
RPL5
MEAK7
OTUB2
UTP18
MBTD1
PXMP2
POLE
ZBTB8OS
RBBP4
UQCC1
EIF4A1
VEZF1
MAPRE3
MTRR
FASTKD3
AP3S1
RCAN1
VDAC2
CBWD2
PRDX1
POLDIP3
LRCH4
FBXO24
SMPD1
CUL7
SLC24A1
INTS14
CRKL
FBXO11
PPRC1
ZC3H7A
USE1
VPS37A
CNOT7
SEC16A
C9orf163
ZNF438
KLRK1
FRAT1
HDAC6
HMCES
SIDT2
NR1H3
ACP2
DPAGT1
C2CD2L
HNRNPA0
EEF1E1
ARAP3
MT1X
NADK
PIM2
MYO9B
HAUS8
FBXW2
CENPF
CELF1
CELSR3
G3BP1
SNRPC
GPKOW
POLG
TCAF2
KRT32
IFT140
CRAMP1
PCIF1
STAT3
SQSTM1
ARHGEF1
PPWD1
CENPK
CDKN1A
SAP30BP
RECQL5
HMBS
ATAD3A
ITFG2
RBM4
MRPS22
GPR156
DOHH
ATXN1
KRTAP20-4
AARS2
FOSL1
SNX19
MRPS28
PICALM
ZNF503
TM4SF4
TMEM138
CYB561A3
ATP6V0D1
AGRP
ILF3
TMEM101
RNF13
PIK3R3
NUP214
PAXIP1
PTPN14
NOC4L
DDX51
KCTD5
COL16A1
SNAI1
RAB5IF
LRRC8C
SLC35E1
ASH1L
IFRD1
ZBTB45
DENND4B
VPS26A
AQP5
TARDBP
MAP2K3
TUBB
MDC1
FAM71D
TDP2
ACOT13
MADD
SAR1B
CHEK1
DNA2
ROCK2
H2BC21
H2AC21
H2AC20
VPS33B
SPATA25
NEURL2
CTSA
MBNL1
MTBP
MRPL13
RWDD1
UPP1
CIPC
TUFM
SH2B1
ABCC3
SLC25A23
CRB3
H4C3
H1-6
SREBF2
PARP1
OCLN
EIF3B
ITGBL1
CFAP221
PPP2R3A
MARCHF8
ZC3H10
RPL41
TOR4A
OSGIN1
ANK1
CYB5R2
DUSP1
CTTNBP2NL
IQANK1
FAM83H
TTC5
VCPKMT
LOC102724265
H1-3
C1orf174
DCLRE1B
AP4B1
TK1
TTC31
CCDC142
CLYBL
MRPL3
AHCY
MRPL39
CLCF1
KLHDC10
TRIM55
NPIPB8
C2orf42
TCTEX1D4
BTBD19
DDB2
VEPH1
AIFM2
TET1
MMP13
DDX41
NDUFS7
TRMT61B
MRPS2
C9orf116
TTI1
RPRD1B
HLCS
GJD4
CENPE
MORF4L1
SP6
TTC21B
NDUFA4
ALG13
RABGAP1
TSC22D4
NYAP1
ZFP64
DPP3
BMF
TM9SF4
DDX11
HTATIP2
MED28
FDXACB1
C11orf1
DDX23
PER2
CNNM4
MICAL2
RAE1
PEX5
TMEM260
MGST3
SSU72
NUDCD3
AMOTL2
ANKRD36
HM13
CCDC130