ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652959 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◣ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF76
FRG2C
DUX4
ZNF143
HYAL2
ATXN7L2
HSPE1-MOB4
HSPE1
HSPD1
POLR2J3
GDA
HNRNPA2B1
CBX3
IL7R
DAGLA
MTRNR2L1
HHIPL1
CCDC85C
ARRDC4
PDXDC1
C11orf86
CSGALNACT1
FAM53C
CDC25C
ALDH18A1
SLC39A10
KRT34
SLC35E2B
SLC39A13
WDR70
WASF2
SRI
OR10D3
DNAJB12
OTULINL
SETD1A
ATG101
ZC3H6
RPN2
MROH8
NNMT
PSMC3
ZNF687
CUL2
FOS
CD59
NR6A1
FHL2
STRBP
GLIS1
LIPK
ZNF408
ARHGAP1
SNX15
XPO7
FRG2
GPR137
BAD
NUDT3
NR4A1
YY1AP1
DAP3
ATAD2
MYO9B
HAUS8
GKN1
DGAT2
CARD16
TSC1
GFI1B
CCDC59
HARBI1
ATG13
DKK1
SPRING1
RNFT2
NEK2
GTF3C5
RASSF9
DDX17
KAT5
TSR3
GNPTG
TBL1X
COX20
TSN
ATR
PAIP1
KLRC2
LOC388282
KIFC3
TEAD1
BCAS1
MRPL48
ATF3
ISY1-RAB43
ISY1
WDR43
KLF1
GCDH
RALGDS
RAB22A
GYPC
WNT1
RAPGEF1
CDK5RAP2
MTCH1
TMEM41A
ERCC1
LRRC37A3
BRIX1
DNAJC11
PRR5L
FAM156A
FAM156B
PDK2
USP15
FGGY
NDST2
GNAS
TSR2
CRBN
C5orf51
PHKA2
BRPF1
SFSWAP
EIF3F
PER1
RELA
CD55
UBE2B
CDKL3
MARCOL
USP36
CALM1
PIK3R3
TBC1D13
EIF2D
CDON
SEPTIN7
NUF2
UBB
GFM1
WARS2
C1orf174
PDZK1
DYNLT3
SS18L1
PSMA7
LAMP1
GTF2IRD2B
ARL8B
KLHDC10
FUS
STPG3
NELFB
CYCS
NTMT1
HNF4A
BIRC3
IBA57
NADK2
CYP1B1
MAOA
PCBP2
LANCL2
JRK
SLC25A25
NAIF1
CALM2
SUMF1
METTL1
EEF1AKMT3
CYP27B1
C1orf198
NYX
TSFM
ARID3B
MRPL42
TIMM22
KRT80
DICER1
HRH1
PMVK
CPA4
TES
DNAJC9
PRDM10
PPP1R13L
POLR1G
RRP15
HAX1
SSNA1
ANAPC2
GIPR
C21orf91
SDE2
ZNF674
SLC33A1
EFCAB14
SLC25A53
USP2
POLG
FOSB
RPS14
TRMO
SAMD9
TXNIP
CNEP1R1
DYNLL1
AMDHD2
TADA1
EIF3C
ZER1
CDIN1
SSBP1
ZNF131
BIRC7
ATP6V0C
KRT32
EIF4A2
NAGPA
GPRC5A
KIF1C
INCA1
GCLM
UBIAD1
TCAF2
FAM149B1
ECD
CITED4
CDCA7L
ASB6
VPS33A
RCE1
OGA
TARDBP
BAZ2A
SPATA25
NEURL2
CTSA
CEP295
TMC5
TIGD5
EEF1D
CHMP7
PRKCZ
SCAND1
RPL26
LMNTD1
PARK7
LRP6
RBM48
PEX1
NUP155
INA
PER3
SLC8A1
PPIB
WASHC2A
SPNS1
DPH7
LRRC20
TRIM55
COA6
UQCRC2
DISP3
STK17A
AVPI1
DYNC2I2
FAM102A
ASH1L
NR1H3
ACP2
SPINK1
RIPOR2
ZNF219
TMEM253
FBXO4
HAGH
FAHD1
ARAF
AKR1B1
KAT8
TMEM9
PCIF1
IFT52
TCP11L2
NFX1
ICE1
KIF21A
PYGO2
LOC101928120
RRN3
MFSD12
AURKAIP1
COQ7
ZNF668
ZNF646
TEX2
PIP4K2B
EED
AAAS
ETFBKMT
UBE3C
PDK4
TPRN
TMEM203
NDOR1
TMEM132A
MRPL44
OSMR
GUK1
MBNL1
MTRR
FASTKD3
SOWAHC
SEPTIN10
EIF4G2
SIDT2
KLRF1
DEDD
ATF7-NPFF
ATF7
TMEM185B
NDUFS3
KBTBD4
TEKT2
ADPRS
HES1
PTDSS1
MTERF3
DOHH
CFAP20
FAM133B
KMT2D
FRAT1
ITGB3BP
EFCAB7
ATXN2
H4C12
SRPRA
PRC1
NDUFAB1
WASHC2C
USP49
NBN
TTC33
FAM25G
FAM25C
COPS4
CETP
KNTC1
MYL12B
SECISBP2
ZSCAN32
ZNF174
SSU72
TRIP13
BRD9
IL24
PRPSAP1
ING4
STX16
POR
RBM8A
ZNF335
RAD51AP1
C12orf4
PCCB
GABARAPL1
NDUFS7
RIN1
ATG16L2
PPP5D1
CALM3
NME1-NME2
NME1
H4C15
H4C14
MARCHF6
DOLPP1
TMEM222
FBXW2
CACTIN
PDE4D
UBE3B
ZC3H7A
CNTRL
C5
SRCAP
LOC730183
COG2
PDCD6
CLPB
EBAG9
SLC35E2A
MTBP
MRPL13
PINX1
AP3S1
DAP
CPT1A
LPIN1
THAP12
GVQW3
ATP5MC2
GOLGA1
HSPA9
CLTC
GBA
RAB27B
PSMD5
GTPBP8
OAS1
GTF2H3
EIF2B1
S100A13
CHTOP
RRNAD1
ISG20L2
PRKCSH
CCDC151
PRDX4
ASB2
STX1A
ATL2
PRKCI
ISG20
RPAP3
PLEKHA8
AARS2
PGBD2
UBE2I
NCOA5
ZNF367
SLC35B1
NIFK
IQCH
AAGAB
POLA1
ZNF212
CCDC97
GRIPAP1
EPC2
C8orf33
NEGR1
ATP5MPL
NARF
SLC25A45
FRMD8
ARFGAP2
MTCH2
RBM18
MRRF
TTC9C
HNRNPUL2
YIF1B
KCNK6
PLCXD2
EPYC
TATDN3
NSL1
PDE6D
COPS7B
PRMT3
EFCAB2
USP42
TMEM199
POLDIP2
GGA1
COA1
POLR3B
RPL5
CENPF
SRSF4
USP11
C19orf33
CAPN2
PTGER4
STAT3
CDKN1A
GIT2
ANKRD13A
USP9X
NUDT9
P4HB
CHD2
NR2F2
ZBED5
STK19
DXO
TUBB4B
ZFAND3
HMCES
HASPIN
MTMR12
SCAI
RARB
UBQLN1
TRIB1
MRPS23
LIMA1
ZDHHC6
VTI1A
SENP1
PFKM
CEP63
ANAPC13
TPR
ODR4
ELOB
PGAP2
ITGB1
FCHSD2
EIF1AD
BANF1
ANKRD36C
TMEM14B
ITPRIP
PEX5
RNPS1
TRMT61B
IARS1
YTHDF2
MRPL3
ZNF341
LARP1
DCXR
CAPNS1
SLC48A1
QSOX2
THEM4
PEX11B
PTGES2
GABPB2
YARS1
S100PBP
SH3BP4
RAB5B
ZNFX1
TTC31
CCDC142
DDX41
TMEM107
CPLANE1
TIMM10
CDIPT
TRUB2
COQ4
TSEN54
CASKIN2
VIRMA
PARVA
MSTO1
WDR5
ENSA
TAMM41
PEAR1
INAVA
TRAM1
ECT2
TTI1
RPRD1B
RCOR3
HMG20B
NDUFB1
CPSF2
RPS26
FBXO46
MUC13
LOC102723996
ICOSLG
PTGES
NOL8
CENPP
CCDC124
INPP4B
EIF2S3
CLPTM1
CCL20
PPP4R3A
FOSL1
LIFR
LOC112267881
KIR2DL1
SURF4
KDM4D
CWC15
AMN1
RHOT2
TNRC18
SERTAD4
ANXA8L1
CLN3
APOBR
SNX19
LZTR1
WDR25
WARS1
MEF2D
SPATA46
C1orf226
SREK1
TMEM267
NOTCH2NLA
CTDSP1
SDHAF3
WASHC5
NSMCE2
NCBP2AS2
NCBP2
WDR13
TAGLN2
KLF10
MCOLN1
POC1A
QRICH1
CLUH
POLD2
AMOTL1
PPOX
ARHGEF1
TMEM9B
GIPC1
CBWD2
TIMM17B
PQBP1
ARID5B
NIBAN2
SCAF11
MRTO4
EMC1
MAP3K1
DDX18
ETS1
MRPS30
VPS37A
CNOT7
BMS1
MRPS28
CCDC174
EPSTI1
ZYG11B
BRWD1
S100A16
CDK1
SUPT7L
SLC4A1AP
BACE2
SLC25A3
PRRC2A
AIF1
NCDN
KIAA0319L
ZRANB3
R3HDM1
MAPRE3
HNRNPAB
WEE1
OXCT1
HSP90AA1
SLC41A3
INTS7
DTL
DDX46
FZD1
ASCC1
ANAPC16
DDX59
CTNNAL1
SELENOS
CIDEC
LRRC8A
KYAT1
ARFGEF2
USP12
SCYL3
RACGAP1
POLR2J
CDK9
SMIM12
POLR2D
OAZ3
MRPL9
KATNB1
PXK
LMNA
MTF2
MLH1
EPM2AIP1
RPRD2
TSKU
C2orf49
PFDN4
DPP3
DGKZ
MELTF
PTPN6
C12orf57
BCO2
RPL24
TNPO3
PTP4A1
AGAP11
ADIRF
CXorf58
USE1
C18orf63
PRSS27
PHRF1
SNRPD1
THUMPD3
NKD2
HEXD
S100A2
PRRC2B
STK40
FEM1A
SUB1
PAXBP1
EIF3B
POC5
MDM4
STOM
UBC
PLIN3
NRM
CWF19L1
PPP1R18
ADK
RPGR
GPBP1
MFN2
RPL37
RNF103-CHMP3
RMND5A
SQSTM1
COPS7A
TCF3
NOCT
TOP3A
SMCR8
JUND
THUMPD1
SRP9
KRT17
RPL38
SNRPG
NIP7
COG8
ATXN1
RNF7
CCNT1
PTPN14
ZNF620
SLBP
RICTOR
NSFL1C
EPRS1
SH3GL1
CHAF1A
SPIN1
CCDC200
IER3
FLOT1
PHF19
RCAN1
CEP126
ANGPTL5
MSL2
IFT140
CRAMP1
SIRT4
MRPL27
EME1
TMEM170A
DPP8
CTCF
BMF
TMEM14C
RSF1
AAMDC
OSBP
DYNC1LI2
LSG1
AMHR2
CDKN2AIPNL
CRY2
TBX3
LY6K
NUP214
SRXN1
CCDC34
TPRA1
ZNF181
UQCRH
LRRC41
MCM2
BICD2
RHEBL1
ASNS
HDAC6
HSPA8
EPB41L5
GFOD1
NDUFS6
MRPL36
PPIA
ST6GALNAC4
DLX4
CSTF1
AURKA
C8orf58
CABLES2
NNT
FBXO33
SLC25A36
ACTR1B
MUL1
HKDC1
CDH13
SF3A3
RXRA
INTS1
TMEM126A
ZSCAN16
HEMK1
C3orf18
DTWD2
ARMC8
LOC100287896
LIPT2
GRN
ST3GAL4
PEX19
HNRNPH1
MAP2K3
DCLRE1B
AP4B1
DHX8
ARMH3
ATP8A1
GET4
PAK6
PDCL
KCNK9
RUNX1
SIVA1
PHAX
BROX
AIDA
MRI1
PBX3
TMC1
EGLN1
GSTA4
ZFP64
PAXIP1
C1orf53
UBE2C
INPP5E
SRRM2
MRPL17
MMP13
LIMS1
SMG7
CIZ1
CFAP221
RALY
IPO11
ENAH
TMEM18
UMPS
PLAU
KLHL15
LARS2
PUSL1
ACAP3
H2AX
SUPV3L1
COA8
BAG5
CDIP1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
MYBPC3
CLDN16
TXNRD1
MAZ
CTSS
HPS5
GTF2H1
SMAD3
PDE7A
HERPUD2
CLUAP1
C16orf90
TUFM
SH2B1
SH2D3C
SLC25A23
CRB3
PDCD6IP
MITF
XRRA1
SPCS2
BNIP1
TPK1
LIN7C
MARCHF8
RUVBL1
ZFP14
ABCC3
ZBTB40
ZNF286A
TEX46
KDM1A
ASAH1
MAPK1IP1L
ZFAND2A
POLE3
C9orf43
TCERG1
KAT6B
NCOA4
USP32
PIAS3
KDM3B
SLC20A1
TMCC1
INKA2
DDX20
PMF1-BGLAP
PMF1
FAM76A
BLM
MBTPS2
ALDOA
HACD2
RSAD1
C12orf65
KRTAP20-4
GTF2H4
RIMBP3C
RIMBP3B
NDUFB3
FAM126B
RAD9A
CCN2
LSM2
SLC16A1
INTS4
KLF4
PPWD1
CENPK
SLC35A5
ATG3
SEC13
FHL1
AHCYL1
BDP1
PUM1
MGST3
FLCN
PI3
ZNF165
DNMBP
RAD51AP2
VKORC1
COL16A1
CIPC
H2AZ2
ACAD9
NXF1
PC
BHLHE40
NR4A3
KRR1
RPLP0
TRIM44
PDHA1
PPP1R37
MRM3
GLOD4
ANKRD39
TCF19
CCHCR1
SMYD5
FBRS
CKAP2L
CIAO3
PAXX
CLIC3
RPS3