ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652960 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◢ SRX13652958: HeLa

◢ SRX13652959: HeLa

◣ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
DUX4
FRG2C
ZNF143
POLR2J3
ZNF76
HSPE1-MOB4
HSPE1
HSPD1
IL7R
GDA
ATXN7L2
HYAL2
DAGLA
MTRNR2L1
KCNJ15
PDXDC1
NNMT
KRT34
STRBP
HNRNPA2B1
CBX3
HHIPL1
CCDC85C
SETD1A
SLC35E2B
C11orf86
FAM53C
CDC25C
CSGALNACT1
PSMC3
ARRDC4
FRG2
HARBI1
ATG13
OR10D3
GPR137
BAD
FOS
SRI
ALDH18A1
NUDT3
KLF1
GCDH
CD55
METTL1
EEF1AKMT3
CYP27B1
SLC39A13
KLRC2
DKK1
TES
ATG16L2
NR6A1
TSR3
GNPTG
IBA57
WASF2
SNX15
TSC1
GFI1B
GFM1
IQCH
AAGAB
RPN2
MROH8
FGGY
COA1
OTULINL
MRPL48
BRPF1
WDR70
CCDC200
NR4A1
SSNA1
ANAPC2
OSMR
CPA4
LIPK
GTF3C5
CARD16
ATG101
ZNF687
DNAJB12
HAX1
TCAF2
PPP1R13L
POLR1G
RALGDS
C5orf51
MARCOL
CD59
NOL8
CENPP
CDCA7L
GKN1
USP15
CALM1
SAMD9
ATF3
CUL2
SPRING1
RNFT2
WDR25
WARS1
MMP13
FAM156A
ISY1-RAB43
ISY1
RAPGEF1
PDK4
KMT2D
NDST2
GIPR
TRIP13
BRD9
S100A13
CHTOP
TSN
NEK2
FAM156B
ATF7-NPFF
ATF7
SLC25A25
NAIF1
CDIN1
CETP
RASSF9
TSR2
NUP155
CDIPT
UBE2B
CDKL3
DDX17
DISP3
MTCH1
SEPTIN7
GIT2
ANKRD13A
DNAJC11
WNT1
TSFM
RCOR3
COQ7
TMC5
FRAT1
SLC39A10
SFSWAP
CITED4
TXNRD1
ATL2
CXorf58
EIF2D
RAB22A
MGLL
EIF3F
HDAC6
LIFR
PARK7
EIF3C
GTF2IRD2B
PMVK
IFT140
CRAMP1
ZNF212
GLIS1
BRWD1
SUMF1
WDR74
KLF10
TADA1
UBE2I
TRAM1
DYNC2I2
LANCL2
NDUFS3
KBTBD4
ZNF668
ZNF646
KNTC1
NTMT1
PRKCZ
PEX5
ERCC1
MBNL1
C2orf49
ATP6V0C
BIRC7
TRMO
DDX18
STPG3
NELFB
ZNF219
TMEM253
TXNIP
HSPA8
CDON
CYCS
FHL2
CDK5RAP2
ZNF408
ARHGAP1
TMEM41A
NADK2
PTGES
TIGD5
EEF1D
SH3BP4
SVOPL
TBL1X
ZC3H6
KIF1C
INCA1
MAP2K3
MTUS1
DPH7
GTF2H4
UBE3B
RBM18
MRRF
KLRF1
GNAS
MFSD12
DICER1
STK17A
RNF7
CARD14
ATR
XPO7
CALM2
LRRC37A3
DGAT2
PRKCI
LRPPRC
MUC13
FUS
CDC14C
PAIP1
C18orf63
ALG10B
LMNTD1
BRIX1
ASB6
PCBP2
NDUFB1
CPSF2
DPAGT1
C2CD2L
PHKA2
USP2
ARAF
GBA
PIK3R3
PTP4A1
GPRC5A
SLC33A1
ERICH4
DMAC2
EPB41L5
HTATIP2
CCDC59
GYPC
BZW2
ANKMY2
PIP4K2B
NARF
KRTAP20-4
POLA1
SRXN1
GUK1
AKIRIN1
LAMP1
WASHC2C
QSOX2
PTDSS1
MTERF3
LRRC20
ZFAND2A
ATAD2
BIRC3
ASB2
PDZK1
CDK1
MEF2D
ICE1
ASH1L
FAM133B
RRP1
HNF4A
TBCE
EIF4G2
LIMS1
MAPRE3
EIF1AD
BANF1
ISG20
NIFK
PRKCSH
CCDC151
PSG9
RPL26
KRT32
RPS26
HEMK1
C3orf18
VGLL4
ZDHHC6
VTI1A
HMG20B
ITGBL1
PDE4D
GCLM
CYP1B1
SPNS1
TMEM185B
C21orf91
NYX
RBM8A
CAPRIN2
H4C15
H4C14
ACOT7
BOLA3
JUND
RPLP0
LMNA
MRPS23
PLD1
MIS12
DERL2
STAT3
PSMB7
FEM1A
NR2F2
TPRN
TMEM203
NDOR1
SS18L1
PSMA7
MRPL27
EME1
POLG
ZC3H7A
BCAS1
STX16
SPATA46
C1orf226
PHRF1
FAM102A
KLHL15
PDE6D
COPS7B
SECISBP2
PSME3
PPIB
DNAJC9
WDR13
KIF21A
TTC9C
HNRNPUL2
KCTD9
CDCA2
TRIM44
POLR1H
PMPCA
ENTR1
AMHR2
PAXX
CLIC3
ENSA
POLE4
HES1
THUMPD1
ANKRD36C
PURB
DAB2
NRM
PPP1R18
SLC35E2A
FGD4
WDTC1
INPP4B
NR1D2
NKIRAS1
HPS5
GTF2H1
UPK1B
PER1
ARFGAP2
TMEM9
LOC112267881
KIR2DL1
CENPN
ETFBKMT
TUBB
MDC1
HKDC1
RCE1
PLCXD2
SURF6
CDK9
ZFP64
POR
DOHH
OGA
NAGPA
CAPN2
RBL1
USP36
DOLPP1
INAVA
ITGB3BP
EFCAB7
TSKU
OLFM1
PIH1D2
NKAPD1
DGKZ
TCF3
CRBN
NBN
RAD51AP1
C12orf4
RHOBTB2
CEP63
ANAPC13
ATF6
KRT80
ARID3B
CSTF1
AURKA
CCDC97
ECT2
SLC41A3
PDCD6
PPEF1
STK40
SLC39A4
CPSF1
RIN1
LOC388282
KIFC3
SLC25A53
TBC1D13
SLC48A1
LOC102723996
ICOSLG
FBXW2
EPYC
USP42
ROBO1
VPS37A
CNOT7
PRDM10
ETS1
SLC6A18
EED
CKAP2L
METRN
PPP5D1
CALM3
ITPRIP
NME1-NME2
NME1
CDH13
CSTF3
ZNFX1
ARID5A
FCHSD2
NCAPH
LPIN1
NUP214
C19orf48
H2AZ2
HMBS
TP53BP2
COA6
GRIPAP1
TPR
ODR4
SF3A3
CENPBD1
JRK
EFCAB2
LRRC8A
KYAT1
BACE2
TEKT2
ADPRS
FBXO4
AAAS
PAXIP1
CTSS
PTCD3
POLR1A
RSF1
AAMDC
ARL8B
EIF4A2
PRR5L
C19orf33
SLC35B1
SRPRA
MTCH2
DTWD2
NEDD4L
RNF114
AGAP11
ADIRF
INA
ARHGAP17
H2AX
PPIA
PHF8
YY1AP1
DAP3
WDR43
USE1
RCAN1
NSFL1C
SKA2
PRR11
MAPRE1
PPP4R3A
FAM161B
COQ6
MARCHF6
PCCB
CCDC34
ZNF185
C1orf53
MT2A
EPB41L1
MYO9B
HAUS8
RFX1
TAGLN2
EBAG9
MRPS2
C9orf116
ZNF263
NUF2
ATXN1
RBM24
MIA3
RAB5B
TMEM9B
ZNF487
CDK5RAP1
SSBP1
CDIP1
ARL14EP
NCOA7
OAS1
SLC8A1
COX20
NGRN
TXLNA
FOXN2
C12orf73
TEAD1
FOSB
PRPSAP1
HNRNPUL1
SCAND1
ZNF131
VDAC2
ASH2L
CLYBL
ENDOV
CBLC
CIAO3
AHNAK2
ZNF777
SEC22B
EPC2
SPATA25
NEURL2
CTSA
UBC
CHMP7
ETV6
DPP8
RRN3
DDT
DDX41
SUB1
HNRNPA0
RMI1
HNRNPK
VPS33A
AARS2
HASPIN
PEX11B
ZNF620
FRMD3
ISCA1
COG2
RAB27B
PRRC2B
SRP9
GFOD1
ZNF341
CHD2
LRP6
TRIB1
POLD2
SCRIB
CEP126
ANGPTL5
RBM3
TMCC1
PFDN4
GALNT10
HACD2
UBB
THAP12
GVQW3
MET
RUVBL1
EEFSEC
MAOA
STX1A
NOCT
APOLD1
GPATCH3
SMC1A
RIBC1
ZFP14
POC5
RPL22
RIPOR2
ARID2
USF1
NSUN4
NCOA5
PMF1-BGLAP
PMF1
TMEM247
NDUFS6
MRPL36
AMN1
MTMR14
BAZ2A
HRH1
CENPF
SRSF3
PPP1R37
ZNF2
NMNAT1
LZIC
SREK1IP1
CWC27
TMEM79
SMG5
THEM4
TSEN54
CASKIN2
PPOX
PSMD4
TRAPPC3
MAP7D1
TCP11L2
PSG5
HNRNPF
P4HB
CCDC124
OXCT1
NVL
BCO2
SLC35A5
ATG3
SAAL1
PLEKHH2
SLC14A2
C1orf198
MRPL42
USP9X
BNIP1
RWDD1
RNASEK
C17orf49
NUDCD3
APEH
CSNK1D
SLC20A1
AKR1B1
COPS7A
ZNF181
POFUT1
PLAGL2
NLE1
COMMD2
PLAU
ZNF335
TRUB2
COQ4
NOTCH2
SREK1
CLUH
PPP2R5A
PRDX4
LSM4
PCNP
TST
MPST
AURKAIP1
DDTL
NFIB
KAT5
MYL12B
TMEM132A
ZCCHC4
SLC25A3
EXD1
CHP1
CBWD2
RNPS1
FAM71D
KMT2E
CLPTM1
TOM1L2
DRC3
SLC25A10
NIP7
COG8
DEK
EDF1
HDGFL2
OXR1
INPP5E
RPL24
NUP42
ZP3
PXK
E2F8
TPK1
MSTO1
GSN
CIPC
NAV3
S100A2
SLC25A45
FRMD8
AXL
SRD5A1
B4GALT7
HSPA5
SYNPO
KLHL18
KIF9
AP1M1
CIDEC
NPW
CREM
CDKN1B
NOC3L
PRIM2
CCL20
RNF220
SCGB3A2
MRPS14
TRIAP1
ZNF286A
INTS4
FLCN
MAPK8
SLC36A4
ANKRD2
ACAD9
KAT6B
CNOT6
SAMD4B
GOLGA3
RTN4RL1
DPH1
SIRT4
SRCAP
LOC730183
UQCRH
LRRC41
SIRT1
SEC14L1
CAMTA1
SENP2
TOX4
RAB2B
S100A16
RPS14
RNF103-CHMP3
RMND5A
SUPT7L
SLC4A1AP
ATP5MC2
SUPV3L1
HLCS
LDHAL6A
TMEM138
CYB561A3
MAGI1
PLSCR2
PCIF1
TMEM260
CENPS-CORT
CENPS
MAP2K1
CCDC130
ATAD3A
SH3YL1
ACP1
PDHA1
KLHL5
ZNF248
TMEM267
YTHDF2
CTR9
ATG9B
ABCB8
THAP9
SEC31A
SPATA24
MED20
BYSL
WDR36
PKD1
FKBP3
FANCM
UBQLN1
ELOB
SIVA1
H4C8
PC
SYS1
INKA2
DDX20
SRSF6
ZNF410
DDX1
HEPHL1
KLHDC10
SURF4
UBIAD1
BMS1
IARS1
XXYLT1
KRT17
SNX19
CRIP1
TEDC1
GATB
USP49
SERTAD4
TTC33
MTF2
NDUFB3
FAM126B
WNT9A
RNF214
PCSK7
MICU2
BMERB1
CDC23
KLF5
SOS1
INTS7
DTL
HNRNPH1
DCLRE1B
AP4B1
UPP1
TMEM14C
GJD4
TCF19
CCHCR1
PPIL4
PXT1
KCTD20
ANXA8L1
SAP30BP
RECQL5
CELSR3
MRPS16
PRPF8
RELA
PGAP2
MORF4L1
PSCA
PKD1L2
EXO1
ZFAND3
ZSCAN32
ZNF174
AP3S1
ALDOA
GPR84
MSMO1
B3GAT3
ZNF326
ATF4
ARHGEF1
TERT
USP11
ST3GAL3
NOL11
C12orf65
RRNAD1
ISG20L2
STK19
DXO
PTPN14
SF3B6
FAM228B
DPP9
MED17
H4C12
PTGER4
MEAK7
KDM4D
CWC15
RNF187
HADHB
HADHA
IER3
FLOT1
AVPI1
SYBU
GABPB2
ZNF622
SP2
NEGR1
OTULIN
LEMD2
CIZ1
TGIF1
NECTIN3
MELTF
TDP2
ACOT13
RNF19A
SLC35F5
MRI1
MRPS5
CLCC1
GNB2
TAF1B
ZNF696
HSD17B2
PLIN3
PHF19
NOC4L
DDX51
PER3
ENAH
GATAD2A
ZNF165
SHOC2
BBIP1
ANKRD39
MRPS15
CENPH
NTAQ1
CNTRL
C5
SLC9A8
YEATS4
INO80
CD63
RPL37
ZBED5
ZBTB26
ADK
POLE3
C9orf43
U2SURP
FAM76A
PFKP
UBE2Q1
CERS5
ZNF785
AMDHD2
CNEP1R1
PYGO2
LOC101928120
MCOLN1
CFAP221
SRRM2
TAF4
RRP8
ILK
SSR3
RABL2A
GHITM
FBXO46
LY6K
BBS1
LRCH4
FBXO24