ChIP-Atlas: Target genes

Potential target genes for CPSF4

Query protein: CPSF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13652958 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF4's Target genes

◢ CPSF4: Average

◢ SRX13652957: HeLa

◣ SRX13652958: HeLa

◢ SRX13652959: HeLa

◢ SRX13652960: HeLa

◢ CPSF4: STRING

KMT2A
SNX12
DRAP1
C11orf68
ZNF143
POLR2J3
ZNF76
IL7R
GDA
DUX4
PDXDC1
ARRDC4
NR4A1
HYAL2
KRT34
HSPE1-MOB4
HSPE1
HSPD1
FRG2C
ATXN7L2
MTRNR2L1
HHIPL1
CCDC85C
FAM53C
CDC25C
DAGLA
NNMT
SRI
HNRNPA2B1
CBX3
PSMC3
SLC39A13
HARBI1
ATG13
FGGY
TSR3
GNPTG
C11orf86
STRBP
CSGALNACT1
PTGES
GPR137
BAD
ATR
BIRC7
CARD16
TBL1X
GBA
DYNC2I2
C5orf51
ASB2
COA1
TXNIP
NUDT3
RIN1
BCAS1
SLC35E2B
WASF2
SNX15
RCOR3
RAB22A
PLAU
ATG101
BIRC3
HMG20B
KLRC2
CMSS1
OR10D3
KRT8
ERCC1
H4C15
H4C14
SS18L1
PSMA7
RPN2
MROH8
PIK3R3
MAZ
TES
FHL2
IQCH
AAGAB
LIPK
NEK2
YY1AP1
DAP3
EIF2S3
OTULINL
BRIX1
HAX1
HEXA
ATF7-NPFF
ATF7
FOS
GTF3C5
CETP
TEAD1
STX16
S100A2
SLC25A25
NAIF1
H4C12
EIF3F
NR6A1
EIF2D
CD55
KAT5
RHOT2
SPNS1
RFX1
TSC1
GFI1B
H1-2
TXNRD1
MAOA
CPA4
PLEKHA8
HNRNPF
ZNF687
WDR70
POLG
HAGH
FAHD1
PDE4D
AMDHD2
LAMP1
GLIS1
GFM1
UBE2B
CDKL3
GTF2IRD2B
FRG2
OAS1
AGAP11
ADIRF
TSFM
NAGPA
PDK2
ALDH18A1
BRPF1
CDON
MFSD12
S100A16
USP2
IER3
FLOT1
RAPGEF1
SFSWAP
ARL8B
GPRC5A
RBM48
PEX1
PRKCZ
CDIPT
UBC
THEM4
DNAJC11
CITED4
KIF1C
INCA1
TEKT2
ADPRS
GIT2
ANKRD13A
COA6
PRKCI
CUL2
ZC3H6
ISY1-RAB43
ISY1
PPP1R13L
POLR1G
SCAND1
NOL8
CENPP
MRPL48
AURKAIP1
SETD1A
WDR43
ARFGAP2
STX1A
SLC41A3
P4HB
SPATA25
NEURL2
CTSA
TMEM185B
CLPTM1
FAM156A
FAM156B
RAPGEF3
DNAJB12
TSN
NADK2
POR
SURF6
KCTD5
ASB6
FBXO4
NYX
CAPN2
ATL2
C1orf198
SEMA3B
LRRC37A3
CYP1B1
FAM102A
ATAD2
NDUFS3
KBTBD4
CLTC
PPEF1
CENPN
CDK1
EIF3B
NUP155
TIGD5
EEF1D
RPL37
ICE1
GATA2
WASHC2C
ZNF341
GKN1
RASSF9
RPL26
SMYD3
POLR2J
UBE2I
MEAK7
PPIB
PHF1
JUND
KLF1
GCDH
NDST2
SLC39A10
LOC388282
KIFC3
AAAS
SQSTM1
SUMF1
SSNA1
ANAPC2
STPG3
NELFB
DISP3
DOHH
RPS26
AMOTL1
RALGDS
TRMO
USP15
USE1
INTS4
DDX17
CRBN
MEF2D
MYL12B
ROBO1
TMEM222
GNAS
CNEP1R1
TSEN54
CASKIN2
SUPT7L
SLC4A1AP
PTP4A1
TRIP13
BRD9
RIPOR2
NDUFB1
CPSF2
PTDSS1
MTERF3
TSR2
TMC5
ZNF335
MRPS30
DDX18
ATXN1
PIMREG
ATG16L2
CDCA7L
DNAJC9
CLCN7
RELA
ASH1L
SLC8A1
WDTC1
DGAT2
CDIN1
CDK5RAP2
LMNTD1
CIDEC
LGALS9B
TMEM95
KCTD11
MT1E
MT1M
CALM1
BAZ2A
INAVA
ZFAND3
CEP295
CTCF
RPS20
SNAPC5
CCDC200
C8orf58
WARS2
NR2F2
QRICH1
VIRMA
SMIM12
SCAF11
H3C3
H2BC3
OSMR
MYO9B
HAUS8
TRUB2
COQ4
TMEM260
COG2
CFAP20
EFCAB14
NSFL1C
SLC48A1
RNF103-CHMP3
RMND5A
CELF1
DIP2A
GYPC
MMP13
AVPI1
ZBTB26
GIPC1
RPLP0
TPK1
PMVK
LRRC20
SPATA46
C1orf226
PHF19
MGLL
OXR1
ZZZ3
APOBEC3B
C1orf174
SLC6A18
HMCES
HNRNPH1
PRSS27
ARFGEF2
SYT7
NAA60
SLC35B1
PCCB
TMEM107
NMUR2
PPP2R5A
DPH7
POLA1
QSOX2
INTS7
DTL
ZBED5
MGST3
TTLL6
LRATD2
RHOBTB2
RETREG1
PPCDC
VPS33A
PPWD1
CENPK
CDK16
IBA57
RBM8A
NPW
GNL3L
VPS52
RPS18
CMIP
B3GALT4
DAB2
PPP4R3A
PER1
S100A13
CHTOP
LRPPRC
FUS
ITGB1
C6orf226
PPP6C
ITGBL1
ZCCHC4
SYNC
DOLPP1
MTCH2
DYNLL1
PRDM11
DDX46
DKK1
TSKU
GRIPAP1
NOLC1
ANKRD33B
MARCOL
WDR74
RPS14
PDHA1
AXL
C21orf91
SLC33A1
BRWD1
PPP5D1
CALM3
KRT32
ZNF131
UBE3B
LY6K
FZD1
JUNB
SPRING1
RNFT2
ZNF219
TMEM253
NUF2
TBC1D13
NCBP3
ARID5A
ARL6IP1
MVK
ZER1
VDAC2
ZC3H10
RPL41
CD59
ATP6V0C
RALY
PDZK1
HES1
JRK
MTRR
FASTKD3
MMP24OS
MMP24-AS1-EDEM2
C19orf33
ARHGAP17
NOCT
DHX8
CALM2
KRT80
MARCHF8
TOR2A
TPRN
TMEM203
NDOR1
ETV6
CDKN1C
ATF3
FBXO46
PMF1-BGLAP
PMF1
MET
PEX3
ADAT2
AFF4
NEDD4
POLR1H
H3C15
H3C14
H2AC19
H2AC18
TMEM18
SRPRA
CHCHD5
WDR25
WARS1
ZFP64
KLF4
PHPT1
MAMDC4
INPPL1
XPO7
KLHL15
FUT11
NSUN4
DPY19L4
TINAGL1
DIDO1
TOR4A
PIP4K2B
LIFR
PFDN4
RNPS1
VPS13C
C2CD4A
TAMM41
ASH2L
ITPRIP
EFCAB2
TARDBP
PAIP1
SEPTIN7
PDE6D
COPS7B
LPIN1
PLIN3
HEMK1
C3orf18
SLC20A1
PLEC
CLCF1
PHKA2
SDE2
USF1
ANK3
RFESD
DDX41
RRNAD1
ISG20L2
WDR5
U2SURP
RXRA
NDRG1
YJU2
USP36
BZW2
ANKMY2
NCOA5
INKA2
DDX20
CFAP221
CCDC78
ANTKMT
ZNF503
ARMC1
NTSR1
LANCL2
ECT2
PTGER4
KIF27
RPL5
ACBD6
GUK1
CHD2
AMOTL2
SNAI2
HIBADH
MSTO1
MRPL21
IGHMBP2
PIP5K1A
VPS72
TADA1
UBQLN1
DTWD2
SUPV3L1
CREM
STK35
PLAAT2
TGIF1
SMAD7
GATB
EIF4A2
NUP214
TPRA1
LRCH4
FBXO24
ARMH3
TPM4
GIPR
TMEM41A
ERICH4
DMAC2
DNAJC16
CASP9
HIF1AN
ZNF774
LOC100130520
CD300H
COQ7
PCBP2
DICER1
E2F8
H2AX
PPP1R2
DCLRE1B
AP4B1
NDUFS7
SKA2
PRR11
OLFM1
SMG7
MRPS18B
ACOT1
SSBP1
WDR53
FBXO45
HACD2
BUD13
CYP20A1
CYCS
FCHSD2
MUC13
UQCRC2
ANKRD36C
SLC25A45
FRMD8
ZFX
LRP6
CCDC97
PCIF1
CENPF
SRSF3
XXYLT1
SCYL3
DDB2
ZFPL1
TMEM262
CDCA5
THG1L
UMPS
STARD7
STAP2
MPND
TIAM2
EIF4G2
ZC3H7A
HKDC1
EPC2
FAM25G
FAM25C
CABLES2
MTMR11
ATMIN
PSME3
NUDT9
TOR1A
RAD23A
KDM5C
CCNL1
ALG10
ZDHHC6
VTI1A
PDCD6
POLE3
C9orf43
ALDOA
RBM14-RBM4
RBM14
HNRNPD
C18orf63
SURF4
RCAN1
HASPIN
SZRD1
PUS10
PEX13
NECTIN3
VPS11
TLE1
SRSF11
LRRC40
SLC25A53
TMEM9
NME1-NME2
NME1
RAD51AP1
C12orf4
EXD1
CHP1
SMC3
MAPK8
OAZ3
MRPL9
NARF
KLF10
CCT5
ATPSCKMT
C2orf42
TMEM79
SMG5
LAMTOR1
ARAF
PPOX
GALNT10
SF3B6
FAM228B
C22orf39
BAZ1B
PIM2
FURIN
DCTN4
USP9X
AKIRIN1
AP3S1
PARVA
TMEM170A
PPP2R3A
B4GALT7
SLC6A9
PLCXD2
THUMPD1
PAXIP1
NEDD4L
BBS1
PIH1D2
NKAPD1
SDC4
SUMF2
MICAL2
TMIE
ALS2CL
SIDT2
ELOB
RWDD1
RNASEK
C17orf49
COL16A1
EPRS1
MED23
UNC5B
SMARCD1
PTCD2
MRPS27
ZRANB3
R3HDM1
HDAC6
ARID2
CCDC124
PEX11B
CSTF3
TIMM10
SMAD3
OSBP
ARL1
SYNRG
BNIP1
TRIM55
FOSL1
CAPRIN2
MINDY2
ALDH3B1
ATXN7L3
CDC23
INA
ARHGEF1
SRD5A1
MAPKAPK5
SAMD9
ITGB3BP
EFCAB7
IFT140
CRAMP1
TCF3
ZNF185
ACOT9
NPIPB8
RNF214
PCSK7
IL4R
EIF4A1
PELP1
ARL4A
ZNF212
ZSCAN32
ZNF174
IFT52
NOTCH2
ANXA8L1
LARP1
MTMR12
SLC35A4
APBB3
SLCO4A1
STK17A
TMCC1
CACTIN
PSMB7
NVL
SLC25A10
TMEM221
SNRPG
PYCR2
RCC1L
NBN
MCOLN1
LRRC8A
KYAT1
NRAS
PRDX1
YY1
ABLIM1
SH3BP4
RCE1
SECISBP2
NOC4L
DDX51
DCXR
ATP8A1
KLHL5
SELENOH
LOXL4
AQP1
ATF6
TACC1
TEX12
IL18
PRKDC
MCM4
VEPH1
SMIM6
AKT2
MFSD4B
ZFAND2A
DPP8
SMPD1
ELP5
CTDNEP1
NMNAT1
LZIC
PANX1
MCM7
AP4M1
NDUFC2-KCTD14
NDUFC2
ZNF524
FIZ1
IL24
FAM71D
USP12
TMEM247
SMN2
SMN1
TIMM50
ARNTL
ZNF668
ZNF646
PYGO2
LOC101928120
SIRT4
CTSS
FLCN
SLC36A4
TAF4
SAR1B
TENT4A
TMEM201
TBL3
SKP2
LMBRD2
KLF13
SYPL1
POU2F3
KRTAP20-4
GABPB2
MSMO1
C1QBP
SAC3D1
WFDC3
DNTTIP1
ETS1
LPCAT3
TCF19
CCHCR1
TFRC
MEF2C
SFT2D3
FOSB
PPP1R37
ANKRD2
PHAX
DTNB
MUC1
YTHDF1
KNTC1
COPS7A
PRC1
KDM4D
CWC15
SLC25A3
MSLN
GUCA2A
MXRA7
KDM3A
KRT78
ATAD2B
STK4
ETFA
NTMT1
CXorf58
LIN7C
STX18
DPP3
UBE2C
SH3GL1
CHAF1A
ZBTB38
TM2D3
C1orf115
TOMM22
SF3A3
FRMD3
HSPA9
TCTEX1D4
BTBD19
ZNF2
H4C3
H1-6
EPB41L1
B3GNT3
GAPVD1
C1orf100
KMT2D
GCLM
TNRC18
TRMT61B
TK1
INAFM2
RPL38
AP3S2
LMNB1
XRN1
SKIL
TGFBR2
TM9SF3
TCAF2
MBNL1
TERT
HMGCS1
PFKP
PINX1
TAS1R1
NOL9
PHRF1
MAD2L2
NLE1
C19orf53
H3-3B
EPOP
MPV17L2
RBM4
NR2C1
WDR13
RBM18
MRRF
AGTPBP1
ADM
OPA1
RPL8
ZNF517
ARID3B
MRPL42
TMEM132A
GABARAPL1
RBM24
RAB5B
GFOD1
SRCAP
LOC730183
DDT
DDTL
UBE2Q1
FNTB
MAGIX
ACAP2
DIABLO
RFWD3
DENND1A
ATXN1L
AQP5
CCL20
SNAI1
LOC101928841
LAMTOR5
FAM3C
BCAS4
ABR
PDE12
C12orf43
H3C13
H2BC18
H2AC16
H1-5
USP54
EIF2S1
ATP6V1D
H3C11
CIZ1
KRT17
GATAD2A
TNFSF15
NOC2L
KLHL17
UBALD2
SUSD1