ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681305 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◣ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

ATP12A
P2RX5
SRM
NAPA
RERE
RAB4B
MIA
ADGRG5
DNAJC5B
CD37
EMID1
BAIAP2
FAM160A1
ABHD12B
CLCF1
GSK3B
ZNRF1
EGR2
IFFO2
HELZ2
SUCLG2
PLEKHA1
CD2BP2
RYK
LMNA
SBF2
PTK2
SYTL3
MYEOV
LGMN
ITGAE
IFNLR1
DEF8
GPR68
PTAFR
WDR74
LCP2
DENND2D
MPEG1
RUNX3
SPON2
ARIH2
BTRC
LYL1
TTC21A
GORASP1
GNA13
RAB3GAP1
PTPN6
ASB2
IFIT3
IL17RA
WNT1
HSBP1L1
HNRNPLL
NIBAN3
PDE2A
DDHD1
CYP1B1
HYLS1
SLC2A5
SYS1
KIF13A
UPP1
CCL4L2
CCL4
ALCAM
GRHL3
TUBB3
MC1R
FCER1G
SPATA4
SMIM3
VPS37C
CD209
RFC2
IGLL5
SMYD4
RPA1
FBXO17
ADAP1
FLT3LG
TMEM229B
DMWD
VOPP1
SELPLG
CHST12
KLRD1
BCL3
ASAP1
RPS3A
NCKAP1
MYH9
ARID5A
LSP1
CLN3
APOBR
RIN1
FRA10AC1
LTA
C1orf127
KMT2E
CFAP54
BLK
PLEKHG6
CTTN
CCR1
MAD2L1BP
WDR81
FGF2
FCER2
RUNX1
IL19
IL10
STK17B
PIK3CA
FCRLB
RAD52
ZSWIM6
SNAPC3
MACC1
LMO2
RBSN
JAML
LZTFL1
BANK1
PDGFB
PLEKHG1
SYNE1
ITGB7
GPR35
EPYC
RFTN1
SLC3A2
NAA16
MTRF1
DOCK10
HSH2D
DGKD
DBNDD1
WDFY1
PPFIBP2
CCL3
ITCH
APOBEC3B
RASA1
LNPEP
ESR1
GPR132
CTSZ
RPRD1A
CCIN
SNTB2
CLN5
JAG1
TTC39C
FASLG
SYPL1
ZNF541
RASSF2
FHAD1
ZNF791
ZNF490
PIGV
ARHGAP31
CD82
YARS1
S100PBP
NT5C1A
AMN1
ARHGEF3
NFKBIZ
THEMIS2
MARCKS
ACSS1
FAM234A
SMG6
TIMM17A
DTHD1
NOP53
DYNLT1
WDR41
CUEDC1
SEMA6A
CD28
CELF2
TIGIT
TSHR
EHF
HMCES
HGSNAT
ACAA2
LRP12
EVC2
EVC
GABARAPL1
SPRED2
CLIC3
LAT2
OR2T1
ELMO2
IL6ST
TACC1
FAM118A
RABGAP1L
NTRK2
LIMS1
CNIH1
PARP1
GPR55
SLC39A13
LAMP3
IL4
BIRC3
MFF
TADA1
MGAT5
SERF2
ELL3
NRROS
PSIP1
TMEM109
PRPF19
SEC14L1
MSGN1
RGS1
PSMC3IP
SIT1
LOC283710
PTPN12
AFF3
LARGE1
DOHH
SLCO3A1
CEACAM3
TENT4B
ICAM1
ABCD2
RASGRF1
CD226
TSACC
CCT3
PPP1R3B
IL6R
RARG
NME7
BLZF1
ARID3B
TUBG2
SHQ1
GRIK4
SPINK2
IGSF6
TARS3
HES1
CMKLR1
BHLHE40
TRIM2
CORO7-PAM16
CORO7
COA6
TNIP3
UHRF2
LRRC32
SH2B3
SYT12
BCL2L11
NCF4
SNX20
STRADA
FCRL4
ATP2C1
PLCB1
EVL
OGG1
SLC17A7
FCRL6
CCL22
DMXL2
NDFIP2
ZNF705E
TMEM104
NAT9
SPOP
AKNA
NLK
NCOA3
SMARCAL1
TLR10
MAP1LC3B2
SMARCC1
OXCT2
FUCA1
CD72
SYCP2L
TMEM116
ERP29
SPTY2D1
RAB38
CEP68
CCPG1
C15orf65
KANSL1L
RSPH14
B4GALT1
C1orf162
KRI1
CDKN2D
SMAD3
UTRN
CDH1
OTULIN
SZRD1
CDC27
APBB1
VPS36
CKAP2
PKM
ZNF302
ANXA4
AAK1
ASNS
MGAT1
GRAMD2B
TMEM138
CYB561A3
RHEX
MBD6
DDIT3
RNASET2
KCNJ1
ZFP69B
MAD1L1
RASSF5
TNNI1
MAP2K1
ELF2
PROB1
MZB1
CSNK1G2
GRAMD1A
CLUAP1
TRIM8
USP6NL
SORBS1
SEC31A
THAP9
ST3GAL5
ARF6
ZNF565
ZNF146
ZYG11B
TRIM7
MEN1
GCNT1
TOM1
ZP3
AMZ1
PIGX
CEP19
CAST
GPR141
PARVB
SDCCAG8
CEP170
SMAGP
DEFB108B
ZGPAT
ARFRP1
SLFN12L
TMEM147
TAS2R50
TRIAP1
CLN8
ARL5B
NSUN6
KCNJ15
SH2B2
SRSF5
PLD4
OCSTAMP
ODAPH
TJP1
MS4A1
FILIP1L
CCDC126
ATP13A2
RARA
MKRN1
ARHGAP45
RNF213
SLC25A37
CSK
HIF1A
HMGCL
C3orf86
ACTG2
WHAMM
ITGAL
FSD2
TSPAN5
BHLHE23
XRCC5
BPHL
EPHB2
ENPP5
MAPK1
C9orf72
NEK6
RHOH
TRAF4
HECTD1
ECE1
TNFRSF14
KDM7A
BCO2
TPD52L2
TEX12
ABR
ABHD16B
LDLRAD4
KLK4
CX3CL1
ICE2
GPR65
TPST2
EHBP1L1
ZNRD2
FAM89B
GNA12
TBC1D22A
WDFY4
LEUTX
DPEP3
EMP3
CCDC114
CD59
TNFSF14
TNFSF10
GSPT1
PDLIM1
CYS1
AFF1
RGS12
LTK
ACTR3
KSR1
CYP51A1
NOTCH2NLA
KCTD6
STBD1
RALGDS
TNFRSF13B
NOTCH2
SNAI3
YAF2
SPTBN5
CDH17
TRAF3IP3
ZPBP2
IKZF3
SLC35B3
EHD1
NEURL1
NAGK
ZFP36L2
IL4I1
C2CD2
RXRA
LRRC34
RNF125
GPR146
TLNRD1
CFHR4
RASAL2
PCDH8
RFFL
PIKFYVE
ATAD2B
CBLL1
SIRT1
SLC35C2
SPECC1
SLC37A2
PIK3R2
FKBP5
VPS26B
NCAPD3
TAGAP
PKIG
CFLAR
PPP1R9B
DCAF12
ADORA2A
AIP
CD244
EPB41L2
ATP6V0A1
LASP1
ADPGK
PCMT1
CLIC5
ARID5B
MYCBP2
GRN
MFSD10
FOS
RBM47
ENPP2
IL2RA
SBF1
ZNF397
RAB22A
NTMT1
HINT2
SPAG8
EIF4ENIF1
NPIPB6
IL12A
PSD4
ZMIZ2
SAMD10
PRPF6
SREBF2
TMEM37
EFHB
GALM
FILIP1
SUN1
GDI2
PRPF40B
SEPTIN9
TAGLN2
VWCE
SLC1A4
TSC22D2
PDGFA
HLA-B
PCM1
MTHFD1L
SPATA6L
PLPP6
CYFIP2
CD101
SYNJ1
HLA-DMB
FBXO10
RIN3
TOX2
NINJ2
CD1A
ANKRD26
NUGGC
LARP4B
TLR1
ARHGAP25
CD55
RNASEK
C17orf49
IL21R
ITGAX
EVI5
CRIM1
GLIS2
DEPP1
CACNB4
EMILIN1
ODF3
SCGB1C1
ITGA4
SMPD1
CD1C
E2F7
ODC1
ITGB2
TTLL12
TP73
ABLIM1
HOMER2
ANKRD13C
TTF2
ZNF799
CHIC2
TNFRSF17
NPIPB2
DUSP2
TMEM123
XPC
LSM3
SCAMP2
ZFP3
RAD50
GCFC2
SLAMF8
AICDA
GNG12
PRODH
LOC102724788
FRMD4A
GHRL
AGPS
RAB8B
CMTM3
FOXO3
CPPED1
TRMT6
MCM8
CLECL1
CD300A
MTG1
RPS15A
HERPUD1
D2HGDH
ECSCR
CLEC7A
HNRNPA2B1
CBX3
NKG7
TCF4
CLDND2
SLC43A3
DCAKD
NMT1
BCL2L1
ADGRE5
COX7A2
SEC23B
NANOS1
RIC1
IL13
TNFRSF10C
RAB43
CCR7
TFAP2A
CCL15
KIAA1841
METTL7A
PICALM
PDXK
EXOSC5
BCKDHA
PTPN2
TFAM
CCL3L3
CCL3L1
AKAP13
CDK13
MROH1
RBM43
FLOT1
NR4A2
MTRNR2L1
ARSB
H6PD
ANXA5
FCRL2
ZCCHC3
CBLB
HOPX
SPATA13
ZNF500
IL16
IQCC
CCDC28B
TANC2
EXOSC4
GPAA1
FTH1
CTDSPL2
LOC388282
TMBIM1
STING1
TIFAB
RGCC
IQGAP2
FLCN
THUMPD3
KCTD5
APELA
MAPK3
NAA50
ATP6V1A
POLI
CRYM
TNFAIP8L2
AP4E1
IL9
IL1RN
BIRC2
SPAG1
C2orf16
WWTR1
HDC
ZBTB45
OSBPL8
KIF21B
ACP5
LITAF
FAM243B
FAM243A
TYW3
CRYZ
CCDC117
SYNE2
LPAR5
TNK2
CEP112
HNRNPUL1
PIMREG
ATF3
BUB1
MSL2
VKORC1L1
CLDN3
TYROBP
NFKBID
HCST
CTH
GTF2E2
LCP1
COPS4
CD86
CEP192
PYCR3
CD38
RAB12
LOC102723996
ICOSLG
FCAMR
HSPA4L
TTC7B
MOB3B
IFNK
ABI1
IL1R1
UPK3BL2
STX1A
NUMBL
DDX42
CCDC47
SMYD3
PJA2
TRMT61A
CKB
SLC4A4
KLRK1
SLFN13
ZBTB21
TMC8
TMC6
ZNF341
FGR
SIKE1
PARP15
PRND
NCOR2
UCP3
TNNI2
NPIPB9
ADA2
PRDM2
SMARCA4
AGRN
PCED1A
KDM8
VPS16
MXI1
CEP83
CGB7
NTF4
HNRNPL
LILRB1
LACC1
CCDC122
RNF166
TJP2
ZSCAN2
SCIN
ENPP3
SS18
SLC16A13
BRIX1
GADD45B
IFNG
GTF2A2
PSENEN
TMBIM4
BCL2L13
PLD3
ZNF821
SLC25A13
ABCB1
VWA7
TRIB1
CYP26A1
PLAAT2
XPO6
PTPN22
PIK3R5
RAB31
NPIPB8
CLDN12
RAB11FIP1
TP63
ZCCHC14
CNR2
RNPEPL1
ANKMY1
RHOT1
HKDC1
RNF139
NCOA1
IFITM5
IFNA2
LYSMD2
PLGRKT
PMVK
PRKACG
EMB
GSTP1
NFKBIA
NOTCH4
REM2
NOTCH2NLC
SLCO4C1
TSC22D1
UBE2L5
TNKS
MDM2
PALD1
ST7
LEPROTL1
ZMYM4
NINJ1
TPR
ODR4
NADK
ARHGEF10L
ELAVL3
CD47
ARHGEF7
ZC3H12C
PDE4A
NRAP
NEU4
CCDC130
ABCA7
IVNS1ABP
MYL12A
IKZF2
DCDC2
KAAG1
IPCEF1
CNTRL
SAC3D1
BOD1L1
GPR31
LBH
GLIPR1L1
CAPS2
KIAA1217
CCDC113
RGS3
RGS14
MAPKAPK2
HECTD4
SYNCRIP
TSPAN14
OASL
CAMK2D
RAP1GAP2
POU2F2
ZNF446
PDXDC1
NET1
SEMA4A
TESK2
B3GALNT2
GZF1
KDM4C
ZNF516
FAM169A
NID1
ULBP2
POFUT2
DNAJC10
CCNI
KAT7
PTGER4
PDCD1
WASL
RPL22L1
SLC26A11
SGSH
BORCS5
SLC43A2
RMND5B
ZBED5
FAM47E
SCARB2
BID
RBM6
TNIP1
SHBG
ATF7IP
SAT2
COLEC11
TANK
BATF
TMEM39B
TMEM212
SLC14A2
RRAGC
AGPAT3
CCDC88A
SUSD3
CLCC1
ZNF318
SLC30A1
VTA1
NMBR
SMG1
CCL26
DOC2B
KLHL29
RXFP3
DSE
SPDYE17
IDO1
RRM2B
DENND5B
LAMA3
NEIL1
SACS
USP48
CBWD5
DNAJC18
FLVCR2
HPSE2
DIPK2A
NCR3
ATP6V0E2
SMIM14
PTPN7
SPATA24
RIPOR2
SSH1
BLVRA
DYRK1B
S1PR2
NME4
PPCDC
SSX2IP
FUS
SFSWAP
LGALS9C
SQLE
AIM2
MTPN
LUZP6
LAPTM5
CD4
DSCAML1
GAN
FCHO1
MIA2
MOB3A
IZUMO4
TIPARP
PPP1CC
SPDYE13
CLIC4
SPDYE9
SPDYE8
SPDYE15
SPDYE11
SPDYE2B
SPDYE2
PRR12
RILPL1
RANBP9
ITGB8
MVB12A
BST2
CD48
RAB24
PRELID1
MIOS
FSCN1
C12orf73
CD79A
ZNRF3
CTDP1
NEK3
UPF2
ERBIN
ZNF292
RNF19A
MAG
MEF2D