ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681308 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◣ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

ADGRG5
RERE
RAB4B
MIA
CD37
FAM160A1
PTK2
P2RX5
GPR68
DNAJC5B
NAPA
HNRNPLL
IGLL5
EMID1
PTPN6
MYEOV
SRM
PTAFR
RUNX1
EGR2
SBF2
CTSZ
HELZ2
PLEKHA1
SUCLG2
GSK3B
ASB2
SLC2A5
IFNLR1
NIBAN3
LMNA
E2F7
RAB3GAP1
HSH2D
VPS37C
GPR35
RYK
TMEM109
PRPF19
CHST12
IFFO2
DENND2D
CLCF1
BLK
TMEM229B
CD2BP2
AMZ1
IL19
IL10
ALCAM
EPYC
RIN1
FGF2
CTTN
WDR74
YARS1
S100PBP
FCRL4
SYTL3
SERF2
ELL3
LNPEP
WDR81
CLIC3
TUBG2
GRHL3
UPP1
ARID5A
DDHD1
PARP1
RFC2
CCL3
VOPP1
TSHR
SPRED2
SMYD4
RPA1
ARIH2
AFF3
MACC1
BCL3
VPS36
CKAP2
PIKFYVE
RUNX3
LSP1
FCER1G
SNAPC3
ITGAE
PIK3CA
SEMA6A
IL17RA
LDLRAD4
SYNE1
CMKLR1
NT5C1A
CD28
SMG6
RFTN1
SH2B3
KMT2E
GNA13
DOCK10
GRAMD2B
OXCT2
KANSL1L
RFFL
HES1
MAP1LC3B2
SMIM3
HYLS1
ABI1
PDGFB
NDFIP2
IFIT3
KLRD1
ZNRF1
HMCES
UHRF2
CNIH1
DMXL2
ZNF791
ZNF490
STK17B
ANXA4
AAK1
B4GALT1
DGKD
RHEX
SDCCAG8
CEP170
MPEG1
RNASET2
LZTFL1
SPATA4
CLN3
APOBR
NCKAP1
CYP1B1
TMEM116
ERP29
IL4
ADAP1
SZRD1
PPFIBP2
CYFIP2
LCP2
BANK1
LTA
PTPN12
STBD1
PLCB1
JAML
UTRN
ECE1
ESR1
SLC39A13
ABHD12B
CYP51A1
SELPLG
ADORA2A
CCL4L2
CCL4
ABCD2
LARGE1
PLD4
SNX20
NCOA3
APOBEC3B
ICAM1
RAB11FIP1
TTC21A
GORASP1
LGMN
ARHGAP39
COA6
SYCP2L
MAD1L1
SEC31A
THAP9
DUSP2
CD226
NINJ2
TIGIT
APELA
RASA1
LAT2
TTC39C
TACC1
SCAMP2
ASNS
ZNF341
NPIPB9
CD38
MAPKAPK2
DEF8
ARID5B
NCF4
SEC14L1
ARHGAP31
ATAD2B
PLEKHG6
JAG1
AGO3
ATP2C1
LIMS1
FRA10AC1
TAGAP
PKM
CCR1
TUBB3
MC1R
FCER2
NOTCH2NLC
XRCC5
PSMC3IP
CUEDC1
LMO2
ITGB7
BHLHE40
PARVB
SKIL
NTRK2
STRADA
ELF2
PIGV
MAD2L1BP
ATP12A
ACTR3
SIRT1
TYW3
CRYZ
RASGRF1
NOTCH2NLA
GPR132
ACSS1
FLT3LG
CD209
SNTB2
LAMP3
ARID3B
ZNF302
RABGAP1L
SMIM14
A4GALT
RASSF2
MGAT1
NPIPB8
NFKBIZ
BTRC
NOTCH2
ITGA4
USP6NL
ADD1
TRIM8
MEN1
SYPL1
TLR1
BIRC3
CFLAR
PRKD2
AKNA
PPCDC
GALM
TSACC
CCT3
CSK
SBF1
RNF125
PLEKHG1
BCL2L11
MAPK1
ZCCHC14
GALNT1
FILIP1L
CLIC5
FBXO17
MYH9
SPTY2D1
WNT1
BCL2L13
TADA1
GRN
F2RL3
CD82
RARA
CD79A
MARCKS
RAB38
RAB43
RGS1
DYNLT1
FUS
KIF13A
RGS3
TNFRSF17
NPIPB2
ZFP3
RNF166
UBE2L5
EFHB
WDFY4
INAVA
ITGAL
SMARCC1
CLCC1
SS18
PCED1A
VPS16
SUN1
CRYM
WDR41
TNFSF12-TNFSF13
TNFSF12
DTHD1
METTL7A
TCTEX1D2
NPIPB11
PSD4
IFNA2
GPX4
CX3CL1
MSGN1
GCNT1
LILRB1
PLEKHF2
KCNJ15
NEGR1
TJP1
RBSN
TNFRSF13B
CD59
ZNF732
DMWD
MS4A1
GPR171
TLNRD1
AIM2
MGAT5
RIN3
LRP12
ZPBP2
IKZF3
ZYG11B
SLCO3A1
NEDD9
LYL1
CCPG1
C15orf65
PSIP1
TNFRSF14
IQGAP2
NPIPB6
CDH17
APBB1
AKAP13
ZNF397
PDXK
FCRLB
MAP2K1
CD55
PCMT1
GTF2E2
CFAP54
THEMIS2
ANXA2R
LOC283710
TBC1D22A
MTG1
DBNDD1
PPP1R9B
IL16
TRAF3IP3
SLC1A4
HECTD1
OGFRL1
LRRC32
NOTCH2NLB
TSC22D2
HSPA4L
FAM234A
GLIPR1L1
CAPS2
FCAMR
AFF1
KCNN3
EHBP1L1
ZNRD2
FAM89B
RMND5B
RBM6
GSPT1
SLC26A11
SGSH
TNFRSF10C
ULBP2
ASAP1
CD72
MBD6
DDIT3
CP
ZNF705E
IL6R
GADD45B
CARMIL1
MYB
BCAT1
ZZZ3
MFSD3
GPT
HINT2
SPAG8
NRROS
PTGER4
CD1C
RICTOR
CEP68
BIRC2
AMN1
RPRD1A
DEFB108B
ENPP5
ZFAND6
GOLGA6L7
ZNF799
NEK6
ARHGEF7
KLHL29
SMAD3
NIBAN1
IL6ST
KDM8
MDM2
SRSF5
ZMYM4
TOX2
CDK13
SLC48A1
CRYBB1
EMP3
CCDC114
RRM2B
OGG1
KRI1
CDKN2D
PICALM
PIK3R2
MALT1
CHIC2
PJA2
REM2
FGR
AICDA
ZNF763
CCIN
ARL5B
NSUN6
ITCH
EXOSC4
GPAA1
POLI
GRK6
ABLIM1
C9orf72
HLA-DMB
RB1
SERHL2
CYS1
DSE
ATP6V0A1
CBLB
UPF3A
ARF6
GRIK4
KLRK1
VPS26B
NCAPD3
SSH1
FBXO10
N4BP3
RDX
RAD50
TTLL12
SPECC1
CLDN12
SH3TC1
ABCA7
BNIP3
EXOSC5
BCKDHA
CMPK2
MYCBP2
ST3GAL5
SLFN12L
GPR141
WASL
MIOS
SMARCAL1
CARM1
RPS3A
MAP2K5
CORO7-PAM16
CORO7
ZNF318
SLC3A2
ABR
UBALD2
TFAP2A
MGRN1
ARSB
MAML3
KSR1
H6PD
TENT4B
TYROBP
NFKBID
HCST
FAM168B
RGS14
PRND
CNPY3
KDM4C
ZNF878
CBLL1
LRRK2
AP4E1
GSDME
TSC22D1
OR4C16
EMILIN1
RFESD
TP73
ARHGAP25
IGFBP4
C6orf89
NPIPB5
SPAG1
ZFP36L2
ARHGAP45
SLC12A2
FKBP5
SNAI3
CCDC117
ZC3H12C
CTDP1
ZFP69B
SMAGP
TRIAP1
IL2RA
SFT2D2
NR4A2
GPR31
TNNI2
IFNG
GZF1
TAGLN2
SPINK2
CD300A
SOS1
ZNF687
NPIPB3
NPIPB4
CLECL1
TFAM
PARP15
IL21R
XPO6
RNF19A
FILIP1
AP2A2
CELF2
SCD
NUGGC
TMEM123
IL1RN
MXI1
AHI1
NAA16
MTRF1
ASB1
KAZALD1
MEF2D
SPOP
CAST
PDLIM1
SLC43A3
RNPEPL1
ANKMY1
IL4I1
ATF3
TULP4
TLR10
NR3C1
SAP30BP
RECQL5
NME7
BLZF1
AIP
UPF2
BUB1
SLC35D1
RSPH14
AQP3
IKZF2
FASLG
HHAT
NKG7
KCTD6
PCBP1
RAD52
NTMT1
TMBIM1
PLD3
WHAMM
FFAR1
TNIP1
WASHC3
HMGA1
CCDC200
FCRL2
YAF2
QSER1
KCTD5
IDO1
RHOT1
NDUFA4
LTK
SMG1
COPB1
PPA2
CAMK1D
LASP1
SLC35C2
UGCG
TMBIM4
IPCEF1
EMB
CCDC126
MOB3B
IFNK
C2CD2
RAD54B
FSBP
FTH1
NAGK
SLC4A4
MTMR12
ZNF700
CAMK2D
SYNJ1
PDE4A
FBXO4
MYL12A
DSCAML1
VKORC1L1
USP3
TIMM17A
CLEC7A
NADK
DEPP1
GSTP1
TIPARP
IFI27L1
DDX24
DCDC2
KAAG1
SPEN
TPST2
FRMD4A
GPR88
TOM1
CCDC88A
GCLM
RHOH
OCSTAMP
MCUB
TMEM243
ACTG2
GNA12
BOD1L1
GDI2
EVL
FLOT1
SLFN13
ZNF516
ZBTB21
SNTB1
SPIB
MFF
SC5D
NCOR2
ZNF292
C3orf86
FAM135A
PIGX
CEP19
MBNL1
FAM47E
SCARB2
CEP83
MLLT6
CD101
CBFB
RNF149
SASH1
CD47
IL1R1
H4C12
COPS4
ADAM19
ATP2B1
HGSNAT
ZBED5
FCHO1
TOP2B
ZGPAT
ARFRP1
ZNF443
NEURL2
CTSA
SPATA25
CD86
SOCS3
PFN1
ENO3
SIT1
MTPN
LUZP6
RIPK1
TNIP3
ELK3
LOC102723996
ICOSLG
DCP1B
FAM184A
ANXA5
NOP53
PRPF40B
EHD1
NUDT9
ICE2
ABCB1
ODF3
SCGB1C1
NLK
SKI
HNF4G
PLGRKT
PPM1A
LIMD1
NEUROG2
PIMREG
RNF170
HOOK3
TPR
ODR4
DDX42
CCDC47
TRIM34
PPP1R16B
CLUAP1
MVB12A
BST2
CD48
RAP1GDS1
DCAF12
GSR
KCNAB2
TSPAN33
PKIG
B3GALNT2
RNF19B
SHQ1
LCP1
ELL
SLC17A7
TTC7A
MCFD2
AKIRIN2
TLCD1
NEK8
NFE2L1
SLC25A13
RBM47
DUSP14
TNFSF15
C1orf127
BRIX1
ERBIN
NBEAL2
CCDC12
ZBTB45
SFT2D3
MTMR4
MNS1
NPIPB12
NPIPB13
ANK3
CCDC102A
CXCR4
LYSMD2
TMEM37
TSPAN5
MPC1
GPR15
CASP8
PPIA
AGRN
ELMO2
KATNAL2
PIAS2
ZBTB18
NANOS1
IDE
RCBTB2
RNASEK
C17orf49
S1PR2
HNRNPA2B1
CBX3
HSP90B1
SRBD1
SSTR2
GXYLT1
NSMF
GKAP1
RIPPLY3
IL1A
UCP3
TMEM267
SLCO4C1
C1orf162
NBN
CASP7
IQCC
RALGDS
CCDC28B
ZFP91
LPXN
TNFAIP8L2
ERO1B
ITGB8
CCR7
RCOR1
PRKACG
BIN1
FHAD1
DPEP3
IGF1
GPR146
SH3BP2
CACNB2
RBM43
RNF213
MX2
GNPDA1
DCAKD
NMT1
PCCA
TMEM30A
HPSE2
SAXO1
RRAGA
CXXC5
AHNAK
POLD4
COX19
CYP2W1
TPD52L2
ABHD16B
MMP9
POLE3
C9orf43
KCNA2
HMGB1
SH2B2
USP28
SREBF2
TRIM7
SAC3D1
PES1
TCN2
ZBED4
RIPOR2
ARHGAP30
MAN2A2
DENND4B
CDH1
PLEK
H4C11
SEPTIN9
ANP32B
SNX3
HNRNPUL1
PTGER2
TLR4
GHRL
USP48
BORCS5
PANK3
TRIB1
HECTD4
ENTPD1
POLQ
FUCA1
CD1A
GPR65
LY9
PLAAT2
RPS6KA1
E2F2
COL19A1
GPD2
RAD51
NFKBIA
CIITA
NABP1
NAA50
ATP6V1A
CIB3
IL10RA
KLF10
GTF2A2
CYB561
ZNF44
RAB24
PRELID1
CD44
LIME1
MYADM
SORBS1
ZNF595
PCM1
CREM
LDLR
MEMO1
YES1
SMPD1
ARHGAP17
TNFRSF10D
EXOC5
AP5M1
FOXO3
MANBAL
ADARB2
TRMT6
MCM8
KIF21B
RILPL1
C10orf99
RGL3
LPIN2
CABYR
EHD4
ENPP2
SLC10A2
MYO9B
HAUS8
SYNE2
PPP1R3B
TNFSF14
MICAL1
SLC39A8
ELK4
POU2F2
PGLYRP4
PDGFA
STK11IP
IL13
RXFP3
BBC3
TP63
DST
PA2G4
CCL5
BEND6
OSBPL8
RPL22L1
GEM
LOC645177
C12orf77
ACVR2A
DENND6A
DYNC2H1
DPY19L4
ICAM2
CD27
TMEM212
RBM38
NDUFAF3
DALRD3
GP1BA
LIMD2
GSE1
SSTR3
SRI
TCF4
EIF4ENIF1
SLC35B3
CTSC