ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19719541 | NK-92
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◣ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

FRG2C
FRG2
DUX4
KMT2A
COL23A1
CYP51A1
VPS36
CKAP2
LNPEP
FRA10AC1
VPS37C
MYEOV
NKG7
CLDND2
ETFB
FAM8A1
BTRC
PIK3R2
ZNF821
RUNX2
RIOK1
CAGE1
NCOA3
GTPBP6
USP17L22
USP17L20
WDR24
ZZZ3
PHLDA1
ZNF341
CFLAR
FAM76B
CEP57
TLE4
PTPN12
DMWD
ARHGAP39
EIF1B
IGFBP7
OR2T1
SLC3A2
API5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ZNF500
NSFL1C
RUNX1
RASA1
LYRM4
FARS2
GSPT1
TTLL12
UGCG
PJA2
PDAP1
BUD31
MYCBP2
ACY3
ICE2
RPS3A
C6orf62
RIN1
DSTYK
SLC39A13
COA6
RUNX3
TOX2
SRSF5
TRIAP1
GTF2E2
LRRC8C
GZF1
PABPC1
NSMAF
ZNF318
RIC1
HOOK2
MLLT6
FLOT2
DENND2D
DOHH
MRPS23
PSIP1
MAD1L1
ABLIM1
AP1G1
ZMYM4
BHLHE40
BCL3
USP30
RETREG2
CNPPD1
FAH
GTF2A2
ZBTB45
NR4A2
NFE2L1
RNPEPL1
ANKMY1
AGTRAP
NAA16
MTRF1
SUCLA2
CCL18
NTRK2
GTPBP8
EMP3
CCDC114
GABPB1
CRYAA2
CRYAA
ZBED5
TLN1
CREB3
TASOR
PPIB
ZNF22
ZNF302
ARID5B
UPF3A
PPM1A
XCL1
AKAP13
NUF2
ZNF398
SDCCAG8
CEP170
BZW1
ANKRD46
DCLRE1C
GFRA4
ATAD2B
ARHGAP30
ANXA5
FAF2
FAM3C
SLC17A7
C5orf51
TPR
ODR4
GCLM
RBSN
MZB1
C10orf62
GSK3B
KCNA3
CCL3
GPAT4
ANXA2R
OSM
SNAPC3
PCNA
RTP5
PRSS38
CLN5
CD1A
DCLRE1B
AP4B1
RBM18
MRRF
OSBPL8
ESYT2
OGG1
PIBF1
DIS3
HDAC10
PARP4
H4C5
SLC33A1
SLFN13
ITGAE
SAC3D1
NUCB2
SETX
NAPA
MYH9
HARBI1
ATG13
POR
PIP4P1
RRM2B
NKIRAS1
NR1D2
HECTD1
DIAPH1
ABI1
EPRS1
RERE
ADGRG5
RAB4B
MIA
P2RX5
FAM160A1
CD37
DNAJC5B
SRM
PTK2
EMID1
SBF2
EGR2
PLEKHA1
GPR68
HELZ2
ATP12A
HNRNPLL
LMNA
PTAFR
RYK
ABHD12B
SUCLG2
CLCF1
CD2BP2
GRHL3
IFFO2
PTPN6
IFNLR1
SYTL3
ZNRF1
HYLS1
RAB3GAP1
IL17RA
ASB2
DEF8
UPP1
CHST12
NIBAN3
SLC2A5
FCER1G
CTTN
TTC21A
GORASP1
ARIH2
SMYD4
RPA1
SYNE1
WDR74
TMEM229B
EPYC
VOPP1
PPFIBP2
WDR81
ALCAM
SPATA4
GPR35
ADAP1
DDHD1
IFIT3
IGLL5
CD28
RFC2
ARID5A
LCP2
LSP1
CCR1
CYP1B1
CTSZ
IL19
IL10
TUBB3
MC1R
HSH2D
GNA13
FGF2
TSHR
MPEG1
BLK
HMCES
KIF13A
KLRD1
CLN3
APOBR
KMT2E
PIK3CA
MAD2L1BP
FCRL4
JAML
SMIM3
NCKAP1
HES1
AFF3
TMEM109
LYL1
CLIC3
PRPF19
AMZ1
LGMN
FBXO17
WNT1
PDGFB
NT5C1A
SELPLG
CCL4L2
CCL4
FLT3LG
ESR1
SERF2
PLCB1
YARS1
S100PBP
CUEDC1
LMO2
PLEKHG6
MACC1
DOCK10
UTRN
SEMA6A
TUBG2
ELL3
DGKD
BAIAP2
BANK1
STK17B
SPRED2
SNTB2
CFAP54
PLEKHG1
CD209
LARGE1
LTA
TIGIT
SMG6
ASAP1
LZTFL1
TADA1
LDLRAD4
PIKFYVE
HSBP1L1
MAP1LC3B2
ITGB7
ZNF791
ZNF490
NFKBIZ
TTC39C
RFFL
FCER2
C1orf127
PARP1
SYCP2L
RHEX
RABGAP1L
APOBEC3B
JAG1
DMXL2
DTHD1
FCRLB
GRAMD2B
OXCT2
RFTN1
RNASET2
NDFIP2
LAMP3
RGS1
PDE2A
ATP2C1
DYNLT1
PSMC3IP
GPR132
BIRC3
LIMS1
STBD1
MFF
ZNF541
UHRF2
APBB1
PIGV
FASLG
DBNDD1
CNIH1
SH2B3
SEC31A
TSACC
CCT3
TENT4B
TMEM116
ERP29
SNX20
MGAT5
E2F7
PLD4
SMARCAL1
FAM234A
ABCD2
MGAT1
ANXA4
SEC14L1
THAP9
SZRD1
SUN1
CAST
DERL1
THEMIS2
CD226
SYPL1
AAK1
CCIN
BCL2L11
RASGRF1
ARID3B
SLCO3A1
SPTY2D1
DEFB108B
TJP1
EFHB
LAT2
RAD52
IL4
ZSWIM6
ACSS1
ARHGAP31
RASSF2
TACC1
NPIPB6
NRROS
TARS3
SLFN12L
RPRD1A
NME7
BLZF1
AMN1
SIT1
NOP53
NCF4
KANSL1L
PARVB
LRP12
ICAM1
MSGN1
ARL5B
CX3CL1
TAGAP
RAB38
CMKLR1
MARCKS
SPINK2
ZNF705E
CD82
NOTCH2NLA
B4GALT1
CD55
FUCA1
WDR41
NSUN6
SIRT1
RNF125
SMARCC1
KCNJ15
ARHGEF3
ACTR3
SPOP
FAM118A
ECE1
CYFIP2
STRADA
CD38
ITCH
NOTCH2NLC
ENPP5
ASNS
MEN1
SPON2
GRIK4
TIMM17A
AKNA
ST3GAL5
GPR141
BCO2
CEP68
C3orf86
FHAD1
CORO7-PAM16
CORO7
MAP2K1
CELF2
PPP1R3B
CLUAP1
NPIPB9
PDXK
PKM
TNIP3
CDH17
ADORA2A
SBF1
SCAMP2
LRRC32
FILIP1L
IL6R
ITGA4
NOTCH2
RARG
CLIC5
EMILIN1
SHQ1
NLK
CDH1
TRAF3IP3
NPIPB8
GCNT1
ZPBP2
IKZF3
IL6ST
NPIPB11
TNFRSF13B
TPST2
SPECC1
SMAD3
USP6NL
CD59
WHAMM
NUGGC
HGSNAT
ZCCHC14
LOC283710
TNFRSF14
SLC4A4
TAS2R50
ZNF397
ELF2
SLC26A11
SGSH
TBC1D22A
DUSP2
UCP3
RAB11FIP1
CP
RIN3
ITGAL
EHF
MAPK1
RARA
ZYG11B
PIGX
CEP19
DPEP3
GALM
AFF1
CDC27
TFAM
EVL
FKBP5
C9orf72
LILRB1
TRIM8
EHBP1L1
ZFP69B
C1orf162
WDFY1
KRI1
RSPH14
COPS4
FLOT1
H6PD
ATP6V0A1
CD101
ZFP3
PRPF40B
PSD4
NOTCH2NLB
XRCC5
GPR171
EXOSC4
CSK
GRN
ACTG2
SMIM14
HPSE2
ARF6
KSR1
TOM1
TYW3
CRYZ
CCL3L3
CCL3L1
GPR65
CDKN2D
ZNRD2
C2CD2
KLRK1
CCDC126
VPS26B
NCAPD3
APELA
TMBIM4
SEPTIN9
CLCC1
HINT2
ARHGAP45
RGS3
FSD2
TLNRD1
EVI5
ELMO2
TLR10
RXRA
FAM89B
WDFY4
RAB43
SH2B2
CBLL1
TNFRSF17
NPIPB2
ENPP2
CCPG1
C15orf65
PPP1R9B
GPAA1
IL2RA
TPD52L2
OCSTAMP
TP73
SPAG8
GABARAPL1
FCAMR
RMND5B
CLDN12
MS4A1
CHIC2
TEX12
RNF139
SSH1
CLEC7A
PROB1
CD72
EHD1
CCDC130
EPHB2
ABR
NINJ2
ULBP2
PTPN22
NEK6
SNAI3
NAGK
IFNA2
CYS1
AIP
ANKRD13C
ZP3
ABHD16B
BHLHE23
SLC1A4
PDLIM1
TMEM104
NAT9
INAVA
LRRC34
AICDA
FILIP1
CD86
PCED1A
IQGAP2
TMEM212
SORBS1
KDM8
ADD1
TCF4
STING1
CCL22
POLI
F2RL3
TSPAN5
NEIL1
TNFAIP8L2
SYT12
EVC2
EVC
VPS16
OTULIN
DCAF12
TMEM138
CYB561A3
TNFRSF10C
EMB
CCDC117
SYS1
IL16
SKIL
PRKD2
GHRL
PKIG
ABCB1
IPCEF1
CD1C
ODF3
THUMPD3
IL4I1
FLCN
RGS14
TRIM7
TLR1
CRYM
ARHGAP25
PCDH8
AIM2
ZFP36L2
NCOA1
ZNF565
BPHL
ELAVL3
ZMIZ2
TMBIM1
SS18
WWTR1
RNF166
SLC43A3
RASSF5
RHOH
CD79A
TTF2
CCDC124
KCTD6
MAPKAPK2
RAD50
LASP1
GNA12
ACAA2
AP4E1
SMAGP
TSC22D2
METTL7A
KCNJ1
NEGR1
RAD54B
PPCDC
ARSB
TNK2
SMPD1
AGO3
DSE
PARP15
FOXO3
IL1RN
KLHL29
GPR55
PCM1
HSPA4L
MYL12A
PLD3
CA13
SCGB1C1
RBM6
VTA1
NMBR
RNASEK
HLA-DMB
TCTEX1D2
PPP1R16B
TRAF4
EPB41L2
TTC7A
MCFD2
ZGPAT
SACS
ARFRP1
NTMT1
RBM43
GPX4
NPIPB5
PDE4A
A4GALT
HMGCL
FSBP
CBLB
UPF2
CPPED1
ABCA7
OXR1
HIF1A
AP2A2
NADK
LARP4B
ITGB8
BCL2L1
NPIPB3
GCFC2
MAML3
MXI1
SLC25A37
FGR
MBD6
DDIT3
DYNC2H1
SC5D
KDM7A
PRND
TRIP11
DEPP1
BCL2L13
ZNF146
FBXO10
C17orf49
B3GALNT2
ZNF799
PICALM
NR3C1
IDO1
IL21R
HHAT
SLC25A13
SEC23B
MAP2K5
IQCC
TMEM147
DCAKD
TRMT6
MCM8
HKDC1
NMT1
NPIPB4
EIF4ENIF1
KIF21B
BOD1L1
WASL
SLC35C2
CNTRL
CDK13
BRIX1
RGS12
HNRNPUL1
TNKS
IGF1
RALGDS
ERBIN
TNFSF14
GLIPR1L1
CAPS2
GSTP1
CD300A
NDUFA4
SAMD10
PRPF6
RNF213
ARL6IP1
CNPY3
RILPL1
CCNI
DPY19L4
NRAP
FAM184A
NAT10
LCP1
CCDC28B
TYROBP
LOC645177
C12orf77
ELK3
BIRC2
ITGAX
CCL15
NFKBID
NEURL1
HCST
PCMT1
KDM4C
NPIPB12
BATF
ATP13A2
ADGRE5
CARMIL1
FRMD4A
TBC1D5
LY9
ERO1B
RIPOR2
ZNF529
ACVR2A
LOC102723996
ICOSLG
SIKE1
TNFSF12-TNFSF13
TNFSF12
CD47
QSER1
TNFSF10
CCDC88A
FCRL2
ATF3
FCRL6
SPATA6L
GPN1
CCDC121
TMEM123
NANOS1
SLC35B3
FUS
MOSPD3
RAB22A
C5orf34
CPEB3
AGPAT3
SLCO4C1
NET1
LYSMD2
BUB1
MTG1
SSX2IP
SLC31A1
HOMER2
FKBP15
ARHGEF7
MVB12A
BST2
DEGS1
DSCAML1
GSR
CYP26A1
ITM2B
RNF149
MYB
USP48
RPL22L1
FTH1
NAA50
ATP6V1A
SFT2D2
MDM2
LBH
XPC
LSM3
RAD51
MX2
HECTD4
CCR7
PLPP6
SOCS3
MEF2D
TAGLN2
IGSF6
SFT2D3
PRKCI
NID1
SCD
RNF19B
CTDSPL2
CAMK2D
CLECL1
MKRN1
SYNE2
GRAP2
SREBF2
AGRN
PDGFA
NOS1AP
AKIRIN2
LACC1
CCDC122
BNIP3
TRIM2
TP63
YAF2
TMEM37
ZNF443
FAM47E
PROSER3
CSNK1G2
CEP83
TIPARP
STK11IP
ZFP91
LPXN
TPM1
ASB1
PPA2
ADA2
CARM1
MFSD3
GPT
PIMREG
PRDM2
GP1BA
MMP9
NCOR2
TNIP1
SNAP29
PI4KA
MTHFD1L
LTK
KIAA1217
NEDD9
TFAP2A
GADD45B
OGFRL1
SPAG1
NBEAL2
GRAMD1A
RPS15A
PRDM1
NPIPB13
GSDME
SKI
MAFF
IL33
MBNL1
MFSD10
ST7