ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

SPATA4
BCO2
TEX12
EFHB
EXD2
SLC4A4
MGP
UTRN
TMEM212
ABHD12B
WDR24
ANK2
ZNF541
MRPS14
NCOA1
POLR3B
CD28
TTC5
BTRC
TAS2R50
NPIPB11
CD1A
SMARCAL1
CCDC59
MYOM3
HPSE2
NUF2
TSHR
CCDC124
USP30
FAM160A1
EIF1B
CCDC130
ZBTB20
STAP1
SBF2
FAM8A1
CLUAP1
VTA1
NMBR
GTF2A2
MED23
PIGK
TMEM115
IPO4
PLCB1
STBD1
MRPL16
UCP3
PCDH1
MRPS23
DYNC1I2
NUP133
ITM2B
CAST
APBB1
THUMPD3
CLDN12
KRR1
NPIPB8
SUGCT
MPLKIP
SYNE1
TARS3
CHCHD3
NUFIP1
GPALPP1
CUEDC1
CP
PLCXD2
EVI5
COMMD1
PLEKHA1
PPFIBP2
SNAP29
PI4KA
ADAP1
EMILIN1
COPS4
CD36
ZNF529
C4BPB
HMCES
COA6
TADA1
EPYC
SYCP2L
HYLS1
RGS1
MFF
C3orf86
GPR141
HIF1AN
ZSCAN31
ZKSCAN3
SIRT4
TMEM208
LRRC29
NCBP3
APP
LRRC49
THAP10
MMS22L
PROSER3
HSPB6
WDCP
NPAS4
CLEC7A
SYCP3
DTHD1
GSPT1
RILPL1
NRAP
SPTLC3
ZBED9
TRIM40
WWTR1
MAD2L1BP
ACVR2A
VPS41
RSPH6A
NCKAP1
RGL4
ZMYM4
DSTYK
GPN1
CCDC121
EMB
CPEB3
NPIPB6
OXR1
RNF149
TMBIM4
NPIPB9
NPIPB5
SNAPC3
KLRD1
ZNF831
PLEKHG1
MMP9
GHRL
FILIP1L
SC5D
PSMC2
DHX8
DNAJC2
EXPH5
SLFN12L
CD55
DPEP3
NLK
DPM2
DEF6
EXOC3L1
E2F4
NPIPB12
CSTF2T
COX16
HELZ2
ARL5B
NSUN6
LMO7
SNTB2
SUN1
GTF2B
AFF3
NPIPB3
NPIPB4
PRKCI
HNRNPA1L2
CFAP54
CCR1
HOPX
SEC22B
NID1
RIN1
CCL15
FUCA1
TMEM267
GPR18
PAFAH2
ACTR6
SLC24A1
ZCCHC14
ARHGAP15
ZNF230
DEFB108B
ZNF500
NR3C1
RANBP6
TCF4
MOSPD3
NOS1AP
IL17RA
SCGB1C2
H4C4
H2BC6
MLX
COASY
GRAP2
WWOX
PDSS2
EPHB2
CDC27
PCOTH
MIPEP
PTK2
ZNF784
BANK1
TRIP11
UBASH3A
TMPRSS3
FAM184A
KBTBD6
ELAVL3
TJP1
CASP8AP2
WDR81
KIF13A
DNAJC5B
SYS1
CA13
OR8D4
NET1
SLC26A11
SGSH
DEF8
PGAP1
NCOA7
MRPS22
SMYD4
RPA1
ARL6IP1
GPR65
SDSL
FCER1G
TPM1
SLC12A3
MAL2
PRDM10
VPS72
MRPS18C
HELQ
SRM
CD101
GTPBP10
FRA10AC1
ARL14EP
HKDC1
NEGR1
BLVRA
RAD18
COL3A1
THAP12
GVQW3
LTF
PLD4
UTS2B
CCDC50
RGS14
TNKS
NPIPB13
VPS29
RAD9B
LRRC59
CSDE1
RFFL
SHQ1
TNFAIP8L2
ILF3
JAML
KLHL20
ZNF397
KDM3A
OR4D11
ERBB2
PDGFB
ERO1A
TTC21B
TBL1XR1
METTL15
KIF18A
ANKRD13C
ANXA1
SACS
CNTRL
SPOP
ZNF350
R3HDM2
AARS2
ELP3
TTC21A
GORASP1
KDM8
ITFG2
PIGX
CEP19
WDR47
ATP12A
TRIAP1
TTC33
JSRP1
NME7
BLZF1
ABCB1
EIF2B5
CHFR
CANT1
TIGIT
DOHH
MGAT5
ZNF302
LY9
TPR
ODR4
ENPP2
FAM126A
DMWD
LARGE1
ZKSCAN4
CHCHD2
CLN3
APOBR
CCR2
CYP51A1
COMMD2
KLRK1
C1orf127
ENPP5
ATP5MC2
CNTN1
ARIH2
NUGGC
SAXO1
RRAGA
TSACC
CCT3
BRIX1
AKAP9
TFPT
PRPF31
PRPF40B
PEX12
NAT10
LONP2
ABCC11
CATSPER4
INAVA
SLC31A1
FKBP15
VPS26B
NCAPD3
C5orf34
MEGF8
TNIP3
EVC2
EVC
FASLG
NSFL1C
CAND1
NT5C1A
NBEAL2
CTTN
SORT1
RPA3
ZNF19
ZNF501
H6PD
RPL11
RPS8
TFAM
PSMC3IP
FAF2
RNF139
WHAMM
FSD2
IPCEF1
REXO2
SAA2-SAA4
SAA2
CRNKL1
CFAP61
SIRT1
EFNA4
SIKE1
NOXA1
ZBTB45
CFAP20
IL1RN
LGALS2
TMTC2
INTS10
CHRNA1
TRIP4
ZSWIM6
IL33
COX6C
FCRL4
C1orf105
PHF20
LRRC34
SLCO3A1
DPY19L4
SURF6
SLC17A1
RAB38
RAB3GAP1
SEC31A
THAP9
PLEKHA6
P2RX5
RIN3
FBXO8
CEP44
STAU1
CCDC30
FOXJ3
HECTD1
COL16A1
LTA4H
CYP26A1
RANBP9
SEMA4D
ATP5F1B
NR4A1
TOX2
SFXN5
UBQLN4
LAMTOR2
MICOS13
HSD11B1L
IFI16
SLC38A9
EIF2B2
RNF151
TBL3
USH1G
OTOP2
COPZ1
SDAD1
H4C3
H1-6
TMEM229B
INTS12
GSTCD
NEURL3
EGR2
CCIN
CDH1
ULBP2
PTPN22
CD2BP2
CCR5
COPS8
RCC1L
ZNF563
CDADC1
TTLL12
XPC
LSM3
TTC7A
MCFD2
KIF21B
DDX27
TPH2
FBXO17
LIN54
NLE1
CCDC146
STK11IP
ABHD2
RBBP5
ZNRF1
SSH1
ARHGAP30
POLR2C
CLIC3
TIMM17A
OCSTAMP
APTX
SPECC1
TTC39C
CBLL1
MDM4
THOC1
CHPF2
ABCF2
ATP2C1
RERE
PRDM1
OGG1
GPR171
MS4A15
RAB4B
MIA
SPTY2D1
EXOSC9
RNF19B
NCOR1
PIGL
DYNC2LI1
RHEBL1
LOC645177
C12orf77
C2orf42
NEIL1
PSENEN
RABGAP1L
ZNF705E
ADD1
TM2D1
GTF2F2
GPR35
TAGAP
MZF1
ASAP1
CTLA4
CARD8
TMEM262
ZFPL1
CDCA5
DDX60
AP2S1
C12orf43
G0S2
BCL2L11
ECI1
CD209
SPATA6L
PLPP6
FFAR2
ODF3
SCGB1C1
HSBP1L1
LILRB1
C2CD2
MACROD2
MEF2A
RRM2B
TEX44
UPP1
ATG5
UTP11
PSIP1
CSNK1G3
SBF1
ADCY4
CBR4
MRPL21
IGHMBP2
KIAA1217
FXR1
CCM2
YIPF2
TIMM29
MAFF
CPSF6
ZFP3
PCDH8
MCC
FCAMR
ITGB3BP
EFCAB7
SNRPB
CD38
KCNE2
DYNC2H1
LMO2
TENT4B
UBL5
ZNF148
DUS3L
GTF2H3
EIF2B1
NOTCH2
RPL22
RBM18
MRRF
NLRX1
TTF2
DNAH8
TSG101
FAM234A
LRRFIP1
RAD54B
FSBP
ITGB1
ZBTB43
CEP85L
SSH2
SREK1IP1
CWC27
RPS3A
HSPA5
PLD3
CD22
STK19
DXO
NFKBIZ
CYB5R2
TPD52
ASB17
CPPED1
ITGAE
CHIC2
CCL26
ZNF224
AIM2
CCDC9
LYRM1
DCUN1D3
EML2
TBC1D19
PDE2A
TP73
FLCN
LATS1
ACSF3
HNRNPLL
BATF
RAD54L2
ZC3HC1
MRPL53
CDCA7
RBM25
RPS7
ADGRG5
WNT1
NELFA
DDX4
GRHL3
TUBG2
SORBS1
SPATC1
ZNF791
ZNF490
TEX46
KDM1A
HIF1A
TNPO1
ST3GAL5
IDH3B
MAP7
EXOSC4
GPAA1
BCL2L1
CYP20A1
NDUFA4
TBCB
POLR2I
OVOL3
RPAIN
NUP88
FLYWCH1
FAM118A
CCNI
NAPA
SRSF5
CD37
ARHGEF3
FOXO3
LMNA
BIRC3
STX18
KCNJ15
ZP3
SUCLG1
DMXL1
SNAP23
OR6K3
ZNF106
BCL3
AMZ1
RXFP3
DYNLL1
FAM185A
RXRA
EPRS1
NFX1
HILPDA
PPIL2
TDRD7
VIPAS39
AHSA1
PPP1R3B
PRND
ZCCHC9
KANSL3
FER1L5
GPR68
AGPS
INPP5B
GBP6
WDR36
ARL5A
WDR70
ZNF225
CISD3
DPH2
B4GALT2
ATP6V0B
TMBIM1
DEPDC7
TMX4
CCDC115
PSD4
HELB
ZNF561
OR2T1
FBRS
PPP6R3
ESR1
ELF1
MTF2
NOP53
NDUFAF5
ESF1
LCP2
SPINK2
CKAP5
AMHR2
MS4A6A
ZKSCAN2
NOTCH2NLC
ZNF181
ING4
TPST2
SEC23B
RAD23A
NDUFB6
SMARCC1
ZNRF2
RCC1
PLEKHG6
TUBB3
MC1R
ABLIM1
NIBAN3
DHX36
CLPB
RGL2
SPDYE3
PUM3
LBH
PALD1
MMUT
CENPQ
MGAT1
CELF2
IGF1
TMEM116
ERP29
ZNF3
SYNPO2L
HTR1A
CX3CL1
THEMIS2
HMGCL
MIS18A
PRSS55
TSNAX
SIAH2
ADIPOR2
TIMMDC1
NDUFA2
IK
TRIM13
HECTD4
FCRLB
NCF1
SKA2
PRR11
DARS1
TNFRSF14
ILDR1
MRPL3
SEMA6A
CDH17
RAB31
KANSL2
GSK3B
FLVCR2
CCDC97
COG7
MAML3
NIF3L1
PPIL3
ZNHIT1
PLOD3
SPRYD4
HTR5A
NOTCH2NLB
RAB22A
PPP2R5E
FASTKD1
ATP6V0A1
GP1BA
MAP3K7CL
CCT8
RPP14
HTD2
ABCB6
KAT7
AP2B1
DPP9
EXD1
CHP1
CHST12
TMEM9B
LINS1
ITGB8
PREPL
CAMKMT
PTPN4
TAF7
CD5L
C5orf51
DHTKD1
PPA2
AP1G1
PMCH
SLITRK3
PRPSAP1
PPP1R16B
DCAKD
NMT1
PTPN7
NBPF11
CLASP2
C8orf37
EMP3
CCDC114
PNPLA1
TMEM33
SNX20
RPA2
SF3A3
KCNJ5
DEXI
CLEC16A
PLEKHM3
KCNK2
NUDT7
TES
SF3B5
NDFIP2
GCFC2
LUC7L2
SNRNP48
FMC1-LUC7L2
FMC1
OXCT2
GRIK4
PRPSAP2
CCNL1
IFFO2
NFE2L1
GDF15
SRSF10
SYT12
PRKD2
FAM76B
CEP57
FHIT
STYK1
HMSD
CWF19L2
SLC66A1
AKR7A2
NTRK2
CD226
RARG
RTTN
B3GALNT2
SNRNP70
IFNA2
NAA35
DNAJC19
ADGRF3
SELENOI
SCAMP2
DRAP1
C11orf68
HDAC9
ITGAX
DYM
FNTA
FIGNL1
SCARF1
TICAM2
MTIF2
CDK14
PITPNC1
ARMC1
NUP214
RFC2
HES1
TM9SF1
GCNT1
DEGS1
ETFRF1
CFAP94
TRMT10A
MTTP
TOMM5
IDO1
RMND1
ARMT1
CD160
RPL31
DCP1B
SLC39A8
TSFM
PDXK
RAB43
YES1
NFKB2
PRAG1
DDX23
WDR77
ATP5PB
TRMT6
MCM8
CIPC
H4C5
ZKSCAN8
H2BC7
LARP4B
RAD51
E2F2
NUCB2
RUBCNL
CMTM6
LNPEP
MAP2K5
GALNT5
SHISAL2A
MTLN
CLCC1
RGS3
LRRC3C
EMID1
HHAT
RACGAP1
PRPF18
ZSCAN12
HSH2D
ELK3
TRIM46
KRTCAP2
TJP2
MACO1
INSC
PIGBOS1
PIGB
RPL29
ODC1
ZUP1
ZNF599
SUCLG2
MANBAL
ASNSD1
ASDURF
TMEM8B
FAM221B
LAMC2
ACTG2
ZMIZ2
YARS1
S100PBP
DOCK10
CTNNAL1
CCDC117
SHBG
SAT2
NBR1
RTRAF
TP63
NUDCD1
UPF2
ZNF732
RNASE6
NOTCH2NLA
RPS15A
CIAO2B
CES2
SLC37A1
GSDMA
RHBDL3
TMEM266
CCDC15
TMEM71
PHF20L1
SNTB1
HOXA4
SNAI3
CD86
ACP5
ZNF335
CREBZF