ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681307 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◣ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RAB4B
PTK2
RUNX1
PLEKHA1
LSP1
ARID5A
GSK3B
LMNA
AMZ1
LDLRAD4
HELZ2
DDHD1
SLC2A5
RUNX3
HYLS1
TMEM229B
MAP1LC3B2
CCL3
GRHL3
DENND2D
GNA13
RIN1
LNPEP
CD28
VPS37C
CTTN
DOCK10
NIBAN3
RAB3GAP1
ALCAM
ARIH2
SUCLG2
SELPLG
ZNRF1
FGF2
TTC21A
GORASP1
MAD1L1
SLC39A13
SNAPC3
SMG6
PIKFYVE
SH2B3
RFC2
PIK3CA
CCL4L2
CCL4
BTRC
AFF3
SERF2
ELL3
CCR1
APOBR
SPATA4
WDR74
UTRN
F2RL3
RFFL
CUEDC1
ATAD2B
ESR1
ABI1
YARS1
UHRF2
CD38
DMXL2
KANSL1L
PIGV
PPCDC
LZTFL1
LAMP3
PARP1
RASGRF1
BIRC3
ABCD2
SPTY2D1
APELA
SLC1A4
MAD2L1BP
FRA10AC1
LGMN
PLEKHG6
SZRD1
PARVB
USP6NL
NOTCH2NLC
NDFIP2
CD55
SNTB2
MC1R
LILRB1
NFKBIZ
CYP1B1
PSMC3IP
NCF4
CSK
CD59
CYP51A1
BANK1
WDFY4
SDCCAG8
CEP170
NCOA3
MGAT1
SEC14L1
PTPN12
COA6
CCDC114
LOC283710
STRADA
GALM
KCNN3
SYTL3
ACSS1
FAM234A
CFLAR
DGKD
MAPK1
NOTCH2NLB
SLC3A2
NOTCH2NLA
NPIPB2
TNFRSF17
CD79A
GPR68
ATP2C1
ARHGAP31
ZNF341
LAT2
ICAM1
FCRL4
GPR171
PSD4
TSACC
CCT3
IQGAP2
EXOSC4
TLNRD1
MS4A1
HSH2D
RPRD1A
TACC1
UPF2
MBD6
CKAP2
BHLHE40
ITGA4
ZPBP2
C9orf72
ARHGAP25
PLEKHG1
TENT4B
NAA16
MTRF1
FUS
AKAP13
SKIL
RGS1
PPFIBP2
RASA1
TADA1
DUSP2
CNIH1
TRAF3IP3
NADK
CYFIP2
WDR41
TLR1
IL6ST
ASB1
LY9
IKZF2
NOTCH2
PSIP1
IL21R
FCHO1
RASSF2
SPAG8
PPP1R18
IL16
CTSZ
GPX4
TOP2B
SYPL1
WNT1
PTGER4
ZNF302
CBFB
RBSN
CCPG1
C15orf65
GSPT1
MFSD3
AIM2
ZYG11B
PCMT1
CD48
DBNDD1
TNFRSF14
CARMIL1
OGG1
ZFP3
NINJ2
TYW3
CRYZ
ASNS
CAPS2
IL4I1
RICTOR
CDK13
NDUFA4
CD101
EVL
SRSF5
ARF6
FBXO10
SMARCC1
NSUN6
ARL5B
SIRT1
ARHGAP45
TMBIM1
CCDC28B
ARSB
SLC12A2
NTRK2
PIGX
CEP19
TNFRSF10C
RGS14
WASL
SPECC1
C3orf86
CHIC2
RRM2B
HNRNPA2B1
CBX3
USP3
KRI1
ZNF318
MIOS
RGS3
SLC26A11
SGSH
ZNF799
SH3TC1
GTF2E2
RAD52
HLA-DMB
RNF125
SMPD1
SLC4A4
TRIAP1
TBC1D22A
H6PD
CLCC1
CCR7
GADD45B
PTPN22
MDM2
CLDN12
CMPK2
KSR1
BORCS5
RBM43
HECTD1
DEF8
HSPA4L
DSE
ANXA2R
BNIP3
TAGLN2
SAYSD1
CBLB
CYS1
ZNF397
TPD52L2
RPS6KA1
PICALM
ARHGAP17
RPS3A
ATP6V1A
NIBAN1
C17orf49
OGFRL1
RPL22L1
ZNF763
ENO3
PFN1
CNPY3
QSER1
SSX2IP
RCBTB2
ELL
CLECL1
HNRNPUL1
ZNF292
N4BP3
TRIM2
TOM1
TCTEX1D2
PPP1R16B
LPXN
FCER2
PJA2
MZB1
TNFSF15
TARS3
EHD1
UPF3A
HMGB1
PCBP1
MBNL1
TMEM123
UPP1
GRIK4
TFAM
AQP3
NUP153
ZFP36L1
ERBIN
FAM168B
ZNF705E
MX2
NEURL2
CTSA
ZNF443
TNNI2
LOC645177
C12orf77
SCD
RIPK1
ARL6IP1
UBALD2
IFI27L1
DDX24
DEGS1
ITGAL
FKBP5
ZNF44
GZF1
POLDIP3
GPR146
TLCD1
RB1
KCTD6
UBE2L5
GCNT1
BOD1L1
ZCCHC3
MVB12A
BST2
BCL2L13
TRIB1
SELENOH
TSC22D2
BEND6
MYL12A
METTL7A
IDO1
CYB561
BRIX1
CCL3L3
CCL3L1
NEK8
MALT1
KIF13A
MFF
SS18
DENND6A
CD1A
RAPH1
CCDC57
RAD50
TIPARP
IDE
SLFN13
ELF2
ABLIM1
BPHL
CCDC88A
SYNJ1
PA2G4
CIITA
NFAM1
H4C12
ZC3H12C
TIMM17A
PRPF40B
GHRL
TFAP2A
WASHC3
ALOX5AP
CCL5
ZGPAT
ARFRP1
SPIB
TNFAIP8L2
SFT2D3
KAZALD1
CLEC7A
NTMT1
GPR141
TRMT6
MCM8
PIMREG
IFNG
GTF2A2
TTLL12
EXOSC9
POLI
SMG1
SLFN12L
CCDC117
TRAF4
AHI1
ZNF700
DALRD3
NDUFAF3
SLC25A37
ANXA5
MYCBP2
CTDP1
DHTKD1
LIMD2
SH3BP2
SHQ1
PIK3R2
LTK
NDUFC2-KCTD14
NDUFC2
MYADM
RBM6
RMND5B
MEMO1
BIRC2
PLGRKT
RHOT1
MGAT5
SLC25A51
CTDSPL2
PLEK
LASP1
CA13
SASH1
CBLL1
RAD51
LACC1
CCDC122
CAMK1D
PDXK
TSPAN14
ZFP69B
EPB41L2
SQLE
CLIC1
RHOH
XPO6
TUBA4B
TUBA4A
PCM1
RGL2
ICE2
CYB5R2
DENND4A
C16orf54
ASPHD2
RNF19A
USP28
HMGA1
FTH1
ANK3
OXR1
DIPK2A
OR4C16
IL10RA
HNF4G
FLCN
SPAG1
NBEAL2
KLF13
TMEM37
LAIR1
MIDEAS
DENND4B
CTSC
NCF1
TRIM34
NR3C1
TJP2
PPM1A
NFKBIA
KCNAB2
CORO1A
SREBF2
GCLM
SMAGP
TMEM266
CCDC97
C5orf34
TTC39C
ARHGAP24
MTMR4
RET
TPR
ODR4
PKIG
NFE2L1
ZBED5
PMVK
AP2A2
TAB2
MICAL1
RFESD
MOB3A
IZUMO4
DCLRE1B
AP4B1
USF1
TOR3A
TNFRSF11B
COLEC10
CLUAP1
TMEM39B
SCAMP1
GSE1
TPM1
PRDM1
YTHDF1
PRND
DOHH
CLN5
PPA2
ANP32E
YY1
CRLS1
CASP8
ITGAX
MAK
MTRNR2L8
YY1AP1
DAP3
TMBIM4
SLC48A1
NFKB2
ZNF878
FAM102B
CYB561A3
YAF2
ZNF687
LRRFIP2
ZMYM4
SC5D
EPSTI1
NAGLU
COPS4
TMEM147
SLCO4C1
ADORA2A
WFDC2
NCKAP5L
MCUB
TICAM1
PCCA
ZZZ3
BATF
SAXO1
RRAGA
TAF15
NUTF2
CENPT
ARSG
GGT1
MRPS18C
HELQ
MTIF2
DYM
RNF34
ENPP2
B3GALNT2
SEPTIN9
ZBTB18
ZBTB45
MUC13
CCL22
SLC35D1
LOC388282
ICAM2
DERL3
SCARB2
FAM47E
TP63
POLE3
C9orf43
EFCAB10
LRRK2
SYNE3
PTPRCAP
LRRC34
SLC39A8
COX7A2
MTMR12
CD86
TMEM30A
RASA2
TRIP11
FSD2
ELK4
FNTA
LPIN2
RCOR1
MROH1
IVNS1ABP
ACOT7
RDX
ESYT2
SRGN
MIA2
CTH
PPIA
BID
SMIM14
LATS1
EXOC5
AP5M1
SLC50A1
POLD4
TRNT1
NUF2
ARHGAP30
ZBTB21
IL18RAP
CPNE5
PPIL2
FLOT1
FMNL1
HEXB
FAM135A
DDX42
CCDC47
VKORC1L1
DDX60
BZW1
CAVIN3
COL19A1
EHD4
HECTD4
RMND1
ARMT1
MRPS26
SECISBP2
IQCE
EVI5
SPAG9
GKAP1
MPC1
EGR2
ACKR3
IRF8
NCOA2
MYO1G
TMEM44
AMPD3
MTA3
SURF4
ACAA2
CYP20A1
TMX4
KCNK10
ZNF592
NEUROG2
PREPL
SLC35B3
SKI
EIF4A1
CLDND2
DYNC1H1
ADARB2
DSCAML1
SLC16A6
PLD3
TTC30B
TUBB4B
RAC2
TRAF3
TNFSF14
SEMA4A
CFAP298-TCP10L
CFAP298
SCIMP
COG2
BCL2A1
SAC3D1
RWDD2A
PGM3
BBS2
TACSTD2
OTUD1
UGCG
DST
KIAA2013
GPR132
KATNAL2
PIAS2
FAR2
EP300
TMEM62
NUB1
GPN1
CCDC121
H2AZ2
CAMSAP2
ZFP36L2
GEMIN7
ZNF296
HES1
ANKRD46
NOTCH1
RPS16
ATF7IP
APOLD1
IRF2
ADA2
NINJ1
IL12RB1
LY86
CTDSP1
DGKH
RBPJ
LMNB1
RASSF7
LMNTD2
VEZF1
SMAP1
CAMK2D
CCDC9
INTS4
S1PR1
REV3L
MCF2L
NOS1AP
CPPED1
COPB1
PRKACG
GEM
RRAGC
GABPB1
RBM47
C20orf203
COQ2
PRMT1
HERPUD1
UBAC1
USP16
PTPN2
RPAIN
NUP88
LRRC8D
CXCR4
ICA1L
ARMC5
GPR19
ABL1
UBE2E1
GCFC2
GRAP2
MNS1
SMPD2
PPIL6
ARID3B
VIM
CD96
FBXO4
NCF2
NUCKS1
RAB20
ZNF500
HUS1
SETD5
PET117
KAT14
PDCD1
OSBPL8
VWA7
RHBDL3
PIK3CB
ATP2B1
SPNS1
OXCT2
ADI1
DGKI
GLIS2
NOTCH4
KIAA1217
UBL5
MEF2C
DCLRE1C
NEDD9
RHBDD1
PHLDB2
USP18
EIF4ENIF1
AP1G1
ETFRF1
CFAP94
NBN
ACSL1
ZBED4
COMMD10
ZNF670
FAM167A
GNA11
TNFRSF10B
RARG
CCDC130
THOC1
PLCXD2
SPTLC2
FAM107B
GLT8D2
HCFC2
ZFP62
CSGALNACT2
CDCA7
EHF
FAM8A1
SPTBN5
TNPO1
PDAP1
BUD31
FNDC11
MICOS10-NBL1
MICOS10
SMIM19
SLC20A2
C5orf51
CDPF1
ADO
ANKRD13C
SIGLEC10
ZKSCAN2
BIN2
ARHGEF3
TMEM267
ANKRD13D
ITGB1
MKLN1
UGT2B17
SEC23B
DPY19L4
NANOS1
STK11IP
NCOA7
CEP63
ANAPC13
SUSD1
TXNRD1
DLX2
UBE2R2
OSTF1
NMRK1
CLCF1
USP32
RHOG
ANKRD26
GCA
CDK19
AMD1
TRABD
IFIH1
IL27
RUBCNL
STYK1
UCHL5
RO60
MGRN1
CREM
KRAS
TRPV3
NMB
TRIM22
GAN
ZNF446
TNRC6A
NSMCE3
C15orf62
CBX6
SYT5
FDX1
GABARAPL1
MPP5
ATM
ABCA5
MOSPD3
SNX3
H4C11
RNF141
GPAT4
SEMA7A
DCT
STYXL1
IL2RB
ATP8A1
TAX1BP1
DLGAP1
SPN
CEP83
SLFN5
BCL3
HPS5
GTF2H1
DCP1B
MRPL53
C19orf47
SETX
OTUD4
TRAM2
IKZF3
TCN2
PES1
ARL5A
FSCN1
TXNL4A
RBFA
RMDN1
M6PR
KLRG1
SSH2
DAG1
TTYH3
SORBS1
TMOD1
ARHGAP29
DPH6
CD244
TPGS1
SS18L2
SEC22C
MTHFS
DIS3L
PABPC1
SPRY2
CDYL
RABGAP1L
SLC25A15
SPATA1
GNG5
DNAJC10
STT3B
RASGEF1B
TGFB1
PHF19
ACVR2A
ADIPOR2
GPR18
KDM3B
PXT1
KCTD20
TBC1D1
PARN
FGFR1
GIGYF1
ZP3
RIC1
HERC6
EHBP1L1
RCOR3
SNX15
HP1BP3
EBI3
CBX1
FSD1L
SEPTIN7
SMC3
ASXL2
TPD52
GFI1
VAV1
MTG1
ZEB2
MKNK2
EPRS1
DLAT
CD164
ZNF627
ZNF410
LMBR1
DUSP22
ASB2
KLF6
MYO1C
VTA1
NMBR
SMAD4
DENND5B
LAPTM5
RELA
RAP1GDS1
HIVEP1
C15orf39