ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681308 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◣ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RAB4B
FAM160A1
PTK2
RUNX1
HELZ2
PLEKHA1
SUCLG2
GSK3B
SLC2A5
NIBAN3
LMNA
RAB3GAP1
VPS37C
DENND2D
TMEM229B
AMZ1
ALCAM
RIN1
FGF2
CTTN
WDR74
YARS1
SERF2
ELL3
LNPEP
GRHL3
ARID5A
DDHD1
PARP1
RFC2
CCL3
ARIH2
AFF3
CKAP2
PIKFYVE
RUNX3
LSP1
SNAPC3
PIK3CA
LDLRAD4
CD28
SMG6
SH2B3
GNA13
DOCK10
KANSL1L
RFFL
HES1
MAP1LC3B2
HYLS1
ABI1
NDFIP2
ZNRF1
UHRF2
CNIH1
DMXL2
DGKD
SDCCAG8
CEP170
LZTFL1
SPATA4
APOBR
CYP1B1
SZRD1
PPFIBP2
BANK1
PTPN12
UTRN
ESR1
SLC39A13
CYP51A1
SELPLG
CCL4L2
CCL4
ABCD2
NCOA3
ICAM1
TTC21A
GORASP1
LGMN
COA6
MAD1L1
DUSP2
NINJ2
APELA
RASA1
LAT2
TACC1
ASNS
ZNF341
CD38
NCF4
SEC14L1
ARHGAP31
ATAD2B
PLEKHG6
JAG1
ATP2C1
FRA10AC1
CCR1
MC1R
NOTCH2NLC
PSMC3IP
CUEDC1
PARVB
BHLHE40
SKIL
STRADA
ELF2
PIGV
MAD2L1BP
SIRT1
TYW3
CRYZ
RASGRF1
NOTCH2NLA
ACSS1
SNTB2
LAMP3
ZNF302
RASSF2
MGAT1
NFKBIZ
BTRC
NOTCH2
ITGA4
USP6NL
SYPL1
TLR1
BIRC3
CFLAR
PPCDC
GALM
TSACC
CCT3
CSK
RNF125
PLEKHG1
MAPK1
SPTY2D1
WNT1
BCL2L13
TADA1
F2RL3
CD79A
RGS1
SYTL3
FUS
KIF13A
NPIPB2
TNFRSF17
ZFP3
UBE2L5
WDFY4
SMARCC1
SS18
CLCC1
WDR41
METTL7A
TCTEX1D2
GPX4
GCNT1
LILRB1
RBSN
CD59
MS4A1
GPR171
TLNRD1
AIM2
ZPBP2
ZYG11B
CCPG1
C15orf65
PSIP1
TNFRSF14
IQGAP2
CTSZ
AKAP13
ZNF397
CD55
PCMT1
GTF2E2
ANXA2R
LOC283710
TBC1D22A
DBNDD1
TRAF3IP3
SLC1A4
HECTD1
OGFRL1
NOTCH2NLB
TSC22D2
HSPA4L
FAM234A
CAPS2
KCNN3
RMND5B
RBM6
GSPT1
SLC26A11
SGSH
TNFRSF10C
ASAP1
GPR68
MBD6
ZNF705E
GADD45B
CARMIL1
ZZZ3
MFSD3
SPAG8
PTGER4
RICTOR
BIRC2
RPRD1A
ZNF799
NIBAN1
IL6ST
MDM2
SRSF5
ZMYM4
CDK13
SLC48A1
CCDC114
RRM2B
OGG1
KRI1
PICALM
PIK3R2
MALT1
CHIC2
PJA2
ZNF763
NSUN6
ARL5B
EXOSC4
POLI
ABLIM1
C9orf72
HLA-DMB
RB1
CYS1
DSE
UPF3A
CBLB
ARF6
GRIK4
FBXO10
RDX
N4BP3
RAD50
TTLL12
IL16
SPECC1
CLDN12
SH3TC1
BNIP3
CMPK2
MYCBP2
SLFN12L
GPR141
WASL
PSD4
MIOS
RPS3A
ZNF318
SLC3A2
UBALD2
TFAP2A
MGRN1
ARSB
H6PD
TENT4B
FAM168B
RGS14
PRND
CNPY3
ZNF878
CBLL1
LRRK2
OR4C16
RFESD
ARHGAP25
SPAG1
ARHGAP45
SLC12A2
FKBP5
CCDC117
ZC3H12C
CTDP1
ZFP69B
HSH2D
SMAGP
TRIAP1
TNNI2
IFNG
GZF1
TAGLN2
ZNF687
CLECL1
TFAM
DEF8
PARP15
IL21R
XPO6
RNF19A
AP2A2
SCD
TMEM123
AHI1
NAA16
MTRF1
ASB1
KAZALD1
IL4I1
NR3C1
UPF2
SLC35D1
AQP3
IKZF2
KCTD6
PCBP1
RAD52
NTMT1
TMBIM1
PLD3
WASHC3
HMGA1
YAF2
QSER1
IDO1
NTRK2
RHOT1
NDUFA4
LTK
SMG1
COPB1
PPA2
CAMK1D
LASP1
UGCG
TMBIM4
FTH1
SLC4A4
MTMR12
ZNF700
CAMK2D
SYNJ1
FCER2
FBXO4
MYL12A
DSCAML1
VKORC1L1
USP3
TIMM17A
CLEC7A
NADK
TIPARP
IFI27L1
DDX24
RGS3
FRMD4A
TOM1
CCDC88A
GCLM
MCUB
BOD1L1
SLFN13
ZBTB21
SPIB
MGAT5
MFF
SC5D
ZNF292
C3orf86
FAM135A
PIGX
CEP19
MBNL1
SCARB2
FAM47E
CEP83
CD101
CBFB
FCRL4
SASH1
H4C12
COPS4
ATP2B1
ZBED5
FCHO1
TOP2B
ZGPAT
ARFRP1
ZNF443
NEURL2
CTSA
ENO3
PFN1
RIPK1
DCP1B
ANXA5
PRPF40B
EHD1
NUDT9
ICE2
SKI
HNF4G
PLGRKT
PPM1A
NEUROG2
PIMREG
TPR
ODR4
DDX42
CCDC47
TRIM34
PPP1R16B
CLUAP1
MVB12A
BST2
CD48
UPP1
RAP1GDS1
KCNAB2
PKIG
B3GALNT2
SHQ1
ELL
NEK8
TLCD1
NFE2L1
RBM47
TNFSF15
DUSP14
C1orf127
BRIX1
NBEAL2
ERBIN
ZBTB45
SFT2D3
MTMR4
MNS1
CXCR4
ANK3
TMEM37
MPC1
CASP8
PPIA
CYFIP2
ELMO2
KATNAL2
PIAS2
ZBTB18
NANOS1
IDE
RCBTB2
C17orf49
HNRNPA2B1
CBX3
SRBD1
GXYLT1
GKAP1
PDXK
TMEM267
SLCO4C1
NBN
CCDC28B
LPXN
ZFP91
TNFAIP8L2
CCR7
RCOR1
PRKACG
GPR146
SH3BP2
RBM43
MX2
PCCA
TMEM30A
SAXO1
RRAGA
POLD4
TPD52L2
POLE3
C9orf43
HMGB1
USP28
SREBF2
SAC3D1
ZBED4
ARHGAP30
DENND4B
EVL
H4C11
PLEK
SNX3
HNRNPUL1
TLR4
GHRL
BORCS5
TRIB1
HECTD4
CD1A
LY9
RPS6KA1
COL19A1
RAD51
NFKBIA
CIITA
ATP6V1A
IL10RA
GTF2A2
CYB561
ZNF44
MYADM
SORBS1
PCM1
MEMO1
SMPD1
ARHGAP17
EXOC5
AP5M1
ADARB2
TRMT6
MCM8
LPIN2
ENPP2
MICAL1
SLC39A8
ELK4
STK11IP
TP63
PA2G4
CCL5
BEND6
OSBPL8
RPL22L1
GEM
ACVR2A
LOC645177
C12orf77
DENND6A
DYNC2H1
DPY19L4
ICAM2
DALRD3
NDUFAF3
RBM38
LIMD2
GSE1
EIF4ENIF1
SLC35B3
CTSC
ZFP36L1
ACOT7
C5orf34
ESYT2
RMND1
ARMT1
MTHFS
FAM8A1
RNF141
TNRC6A
TNRC6B
EPSTI1
C15orf62
POLDIP3
TRNT1
PIK3CB
RAPH1
KMT2A
SAYSD1
DLAT
POFUT2
SETD5
MYO1G
DEGS1
RASSF7
LMNTD2
LRRC8D
TRIM2
RPA2
SSX2IP
CTH
NCKAP5L
LRRC34
GAN
DHTKD1
CFHR4
CLDND2
SMAP1
CDCA7
ACAA2
BATF
TMC6
RBPJ
ST3GAL3
TARS3
TMEM266
CTDSPL2
CCDC130
TRAF4
BIN2
MZB1
CA13
NOS1AP
SPTBN5
CYB561A3
MTIF2
DDX60
DAG1
NAPEPLD
LOC388282
PRDM1
SMC3
ZKSCAN2
SLC25A51
EGR2
CTNNBL1
YPEL1
ATPAF1
HPF1
DOHH
EXOSC9
SEPTIN9
STYK1
GNPNAT1
GNA11
SNX24
OXR1
TBC1D1
SYNE3
BZW1
JMJD1C
REEP3
SLC25A37
MRTFA
ME1
LATS1
IL18RAP
NUTF2
CENPT
NKIRAS1
NR1D2
E2F5
TYROBP
SEMA4A
MOSPD3
H2AZ2
MROH1
TUBB4B
ZNF670
RIC1
NFU1
GALNT5
FDX1
PTPN2
DCLRE1B
AP4B1
ZMYM5
GABPB1
KIFBP
SMIM14
PWWP3A
NUP153
ANKRD46
LAIR1
SCAMP1
YY1AP1
DAP3
ASPHD2
UGT2B17
ETFRF1
CFAP94
IL12RB1
GCFC2
IL2RB
CCL3L3
CCL3L1
SLC50A1
UGGT2
DYNC1H1
RET
SEC23B
ITGAL
GPN1
CCDC121
HUS1
CBR4
ANKRD13C
PAK2
ARL6IP1
TOR1AIP1
PTPN22
MIA2
ITGB8
RELA
SECISBP2
ANTKMT
DYM
TMEM39B
GIGYF1
CD164
EHF
FLCN
KIAA1841
IVNS1ABP
CDK19
AMD1
RMDN2
DENND4A
BCL2A1
CEP63
ANAPC13
NSMAF
GCNT2
ZCCHC3
SIGLEC10
GCA
IFIH1
TJP2
SSH2
WDR1
PACS1
RPAP3
RUFY3
PDAP1
BUD31
RNASEH1
KCNK10
ADI1
GABARAPL1
TXLNB
CLOCK
LACC1
CCDC122
CYB5R2
SYNCRIP
PREPL
VTA1
NMBR
AP1G1
TACSTD2
CORO1A
EVI5
EIF4A1
TAB2
ASPSCR1
ASH1L
KBTBD2
FSD1L
RWDD2A
PGM3
TRIM38
CLN5
IRF5
TRIM22
ASXL2
ADO
TTC30B
STRBP
CCL22
MTA3
DIPK2A
TMEM260
SPTLC2
DTNBP1
STING1
THUMPD3
FNTA
IRF8
RAB20
TMEM65
IGF2BP3
ITGAX
SRGN
PPP1R18
MAK
N4BP2
NFAM1
ANP32E
RASGEF1B
C6orf62
SQLE
TNFRSF11B
COLEC10
GGT1
DSTYK
BPHL
LRRC58
NFATC3
S1PR1
SURF4
CCDC198
GPAT4
GLCCI1
OXCT2
CCDC50
FAM118A
TSTD3
MARCHF3
CNTRL
ITGB1
BMPR2
HEXB
KDM3B
RNF44
FAM102B
CD40
LEPROTL1
WFDC2
CYP20A1
SEMA7A
UFL1
SUSD1
DCLRE1C
CSRNP1
USP22
USP32
NMB
BMP2K
CLIC1
ZNF446
ANKRD13D
PDIK1L
DST
PHLDB2
CAPZB
NAPA
SMAD4
LMNB1
ABL1
OTUD1
ACADM
CCDC9
OR2T1
ZNF500
GRAP2
COX7A2
ECI1
CAP1
GPR84
RAB6A
TMCC1
NINJ1
KSR1
APH1A
UBE2E1
TNFRSF10B
CR2
ZBTB25
ZBTB1
GTPBP8
DNAJC10
FBXL5
SLC16A7
NCF1
ALOX5AP
NREP
NCOA2
GPC5
OTOA
STXBP5
CAMSAP2
TPGS1
ATM
TMCO3
DCUN1D2
SLC37A2
CHKA
VEZF1
PNRC2
PMVK
LMO7
PAH
ASCL1
ADIPOR2
TAF15
PPP1CC
CIZ1
MAGEF1
CBX6
UBAC1
UCHL5
RO60
RASAL2
EPRS1
NDUFC2-KCTD14
NDUFC2
TBC1D9B
EPB41L2
TRIP11
NCF2
ARSG
KIF21A
BRPF1
ZNFX1
TRAM2
ABCA5
C16orf54
PXT1
KCTD20
TKFC
DDB1
SCIMP
C19orf47
GPR55
MEF2C
VASP
TLE4
LZTR1
POLR3G
MBLAC2
INPP5D
ARHGAP24
SETX
KLF13
PTPRCAP
ZNF692
BBS2
SS18L2
KPNA3
TSPAN14
ZNF561
LATS2
GFI1
ZFHX3
MUC13
MRPL53
PPIL3
NIF3L1
NSMCE3
SPATA13
HERC4
NIPAL2
CD47
YPEL3
TPM1
UBL5
INTS4
CCDC112
ZC3H12D
STK10
MAP1B
DLGAP1
RBM33
NEK6
FGFR1
PTCH1
KLF6
NCOA7
SRD5A3
SCAP
NKD1
PIM1
SLC35F5
ECPAS
SNX30
RETREG2
CNPPD1
ZEB1
DLX2
CPNE2
NET1
DENND5B
ANAPC11
ALYREF
PUM1
TNFSF14
C11orf80
THBS4
MTX3
NOTCH4
DRAP1
C11orf68
PLAAT2
MIDEAS
HERPUD1
BUB1
LYST
MX1
CDYL
ZNF441
TLL2
ZP3
CBX1
TMEM62
ZNF592
CD200R1L
NEDD9
FXYD2
SSB
POMP
YY1
CAPNS1
PPIL2
RGL2
SPAG9
YTHDF1