ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

SPATA4
EXD2
SLC4A4
MGP
UTRN
WDR24
MRPS14
POLR3B
CD28
TTC5
BTRC
CD1A
CCDC59
MYOM3
NUF2
USP30
EIF1B
CCDC130
ZBTB20
STAP1
FAM8A1
CLUAP1
VTA1
NMBR
GTF2A2
MED23
PIGK
TMEM115
IPO4
MRPL16
PCDH1
MRPS23
DYNC1I2
NUP133
THUMPD3
CLDN12
KRR1
SUGCT
MPLKIP
TARS3
CHCHD3
NUFIP1
GPALPP1
CUEDC1
PLCXD2
EVI5
COMMD1
PLEKHA1
PPFIBP2
SNAP29
PI4KA
COPS4
CD36
ZNF529
COA6
TADA1
HYLS1
RGS1
MFF
C3orf86
GPR141
HIF1AN
ZKSCAN3
SIRT4
TMEM208
LRRC29
NCBP3
THAP10
LRRC49
MMS22L
PROSER3
HSPB6
WDCP
NPAS4
CLEC7A
GSPT1
SPTLC3
TRIM40
MAD2L1BP
ACVR2A
VPS41
RGL4
ZMYM4
DSTYK
GPN1
CCDC121
OXR1
TMBIM4
SNAPC3
PLEKHG1
GHRL
SC5D
DHX8
DNAJC2
EXPH5
SLFN12L
CD55
DPM2
DEF6
E2F4
CSTF2T
COX16
HELZ2
NSUN6
ARL5B
SNTB2
GTF2B
AFF3
PRKCI
HNRNPA1L2
CCR1
HOPX
SEC22B
RIN1
TMEM267
GPR18
PAFAH2
ACTR6
ARHGAP15
ZNF230
ZNF500
NR3C1
RANBP6
MOSPD3
NOS1AP
H4C4
COASY
GRAP2
WWOX
PDSS2
PCOTH
MIPEP
PTK2
BANK1
TRIP11
KBTBD6
KIF13A
CA13
NET1
SLC26A11
SGSH
PGAP1
NCOA7
MRPS22
ARL6IP1
TPM1
VPS72
MRPS18C
HELQ
CD101
GTPBP10
FRA10AC1
ARL14EP
RAD18
CCDC50
RGS14
VPS29
RAD9B
LRRC59
CSDE1
RFFL
SHQ1
TNFAIP8L2
ILF3
KLHL20
ZNF397
KDM3A
ERO1A
TTC21B
METTL15
KIF18A
CNTRL
ZNF350
AARS2
ELP3
TTC21A
GORASP1
ITFG2
PIGX
CEP19
WDR47
TRIAP1
TTC33
CHFR
EIF2B5
CANT1
DOHH
ZNF302
LY9
TPR
ODR4
ENPP2
ZSCAN31
FAM126A
ZKSCAN4
CHCHD2
APOBR
CYP51A1
COMMD2
ATP5MC2
CNTN1
ARIH2
SAXO1
RRAGA
TSACC
CCT3
BRIX1
AKAP9
TFPT
PRPF31
PRPF40B
PEX12
NAT10
ABCC11
LONP2
FKBP15
C5orf34
MEGF8
NSFL1C
CAND1
NBEAL2
CTTN
RPA3
ZNF501
H6PD
RPL11
RPS8
TFAM
PSMC3IP
FAF2
RNF139
REXO2
CRNKL1
CFAP61
SIRT1
SIKE1
NOXA1
ZBTB45
CFAP20
LGALS2
TMTC2
INTS10
CHRNA1
TRIP4
COX6C
LRRC34
DPY19L4
SURF6
RAB3GAP1
FBXO8
CEP44
STAU1
CCDC30
FOXJ3
HECTD1
LTA4H
ATP5F1B
SEMA4D
SFXN5
UBQLN4
LAMTOR2
MICOS13
HSD11B1L
IFI16
SLC38A9
EIF2B2
TBL3
USH1G
OTOP2
COPZ1
SDAD1
H4C3
TMEM229B
INTS12
GSTCD
PTPN22
CCR5
COPS8
CDADC1
TTLL12
DDX27
LIN54
NLE1
CCDC146
STK11IP
ABHD2
RBBP5
ZNRF1
ARHGAP30
POLR2C
TIMM17A
APTX
SPECC1
CBLL1
THOC1
CHPF2
ATP2C1
PRDM1
OGG1
GPR171
MS4A15
RAB4B
SPTY2D1
EXOSC9
DYNC2LI1
PIGL
RHEBL1
LOC645177
C12orf77
C2orf42
ZNF705E
TM2D1
GTF2F2
MZF1
ASAP1
ZFPL1
CDCA5
CARD8
DDX60
C12orf43
AP2S1
ECI1
SPATA6L
HSBP1L1
LILRB1
RRM2B
ATG5
UTP11
PSIP1
CBR4
MRPL21
IGHMBP2
FXR1
CCM2
NME7
BLZF1
YIPF2
TIMM29
ZFP3
MCC
ITGB3BP
EFCAB7
SNRPB
CD38
DYNC2H1
TENT4B
UBL5
ZNF148
DUS3L
GTF2H3
EIF2B1
NOTCH2
RPL22
RBM18
MRRF
NLRX1
TSG101
FAM234A
ZBTB43
CEP85L
SSH2
RPS3A
HSPA5
PLD3
STK19
DXO
NFKBIZ
CYB5R2
CHIC2
ZNF224
AIM2
CCDC9
EML2
TBC1D19
PDE2A
FLCN
LATS1
BATF
RAD54L2
ZC3HC1
MRPL53
RBM25
RPS7
WNT1
NELFA
GRHL3
SORBS1
SPATC1
KDM1A
TNPO1
IDH3B
EXOSC4
CYP20A1
NDUFA4
TBCB
POLR2I
RPAIN
NUP88
FLYWCH1
FAM118A
CCNI
SRSF5
LMNA
BIRC3
STX18
ZP3
SUCLG1
DMXL1
ZNF106
AMZ1
DYNLL1
FAM185A
EPRS1
NFX1
HILPDA
PPIL2
TDRD7
VIPAS39
AHSA1
PRND
ZCCHC9
KANSL3
INPP5B
GBP6
WDR36
ARL5A
WDR70
ZNF225
ATP6V0B
TMBIM1
TMX4
ZNF561
OR2T1
PPP6R3
ESR1
ELF1
MTF2
NDUFAF5
ESF1
CKAP5
MS4A6A
ZKSCAN2
NOTCH2NLC
ZNF181
ING4
SEC23B
RAD23A
NDUFB6
SMARCC1
RCC1
PLEKHG6
TCF4
MC1R
ABLIM1
NIBAN3
DHX36
CLPB
RGL2
PUM3
PALD1
MMUT
CENPQ
MGAT1
ZNF3
SYNPO2L
HTR1A
ERP29
HMGCL
MIS18A
ADIPOR2
TIMMDC1
NDUFA2
IK
HECTD4
NCF1
SKA2
PRR11
DARS1
TNFRSF14
MRPL3
KANSL2
GSK3B
CCDC97
COG7
PPIL3
NIF3L1
ZNHIT1
PLOD3
SPRYD4
HTR5A
NOTCH2NLB
FASTKD1
CCT8
RPP14
HTD2
ABCB6
KAT7
AP2B1
EXD1
CHP1
DPP9
TMEM9B
PREPL
PTPN4
CAMKMT
DHTKD1
C5orf51
PPA2
AP1G1
PMCH
PRPSAP1
PPP1R16B
NBPF11
CLASP2
C8orf37
CCDC114
TMEM33
RPA2
SF3A3
CLEC16A
PLEKHM3
NUDT7
TES
SF3B5
NDFIP2
GCFC2
LUC7L2
SNRNP48
FMC1-LUC7L2
FMC1
GRIK4
CCNL1
NFE2L1
SRSF10
FAM76B
CEP57
FHIT
STYK1
CWF19L2
RARG
RTTN
B3GALNT2
SNRNP70
NAA35
DNAJC19
SELENOI
ADGRF3
EGR2
DRAP1
C11orf68
HDAC9
ITGAX
FNTA
DYM
SCARF1
TICAM2
MTIF2
CDK14
ARMC1
NUP214
RFC2
TM9SF1
GCNT1
DEGS1
ETFRF1
CFAP94
TRMT10A
MTTP
TOMM5
IDO1
RMND1
ARMT1
CD160
RPL31
DCP1B
TSFM
RAB43
NFKB2
DDX23
WDR77
ATP5PB
TRMT6
MCM8
H4C5
RAD51
NUCB2
GPR68
CMTM6
MTLN
RACGAP1
ZSCAN12
PRPF18
HSH2D
TRIM46
KRTCAP2
TJP2
INSC
PIGBOS1
PIGB
RPL29
ZNF599
SUCLG2
DOCK10
YARS1
CTNNAL1
CCDC117
SHBG
SAT2
NBR1
RTRAF
TP63
NUDCD1
UPF2
RNASE6
NOTCH2NLA
CIAO2B
CES2
RHBDL3
TMEM266
CCDC15
TMEM71
PHF20L1
CD86
ZNF335
CREBZF
TNPO2
PIKFYVE
TIMM22
F2RL3
CETN3
PRKRA
PJVK
AMBRA1
HUS1
CAP1
ZNF596
HMGN4
PARVB
SEPTIN9
SLX4IP
SLC33A1
FKBPL
ZNF692
TESPA1
ZNF443
DCLRE1B
AP4B1
MEF2C
AARSD1
CEP192
SLC14A2
DYNLRB2
PPARD
NSA2
GFM2
POFUT2
TPST1
DPP8
PMFBP1
BTLA
ALCAM
CTNNBL1
FCRL5
NIP7
COG8
GALNT3
ZNF785
POLI
PCYT1A
ATP2B4
RTEL1
H2BC4
H2AC6
TAB1
ICE2
VWA7
CCL3
CCL3L3
CCL3L1
CEP20
KAZN
OCIAD1
PKN2
H2AZ2
WNK1
SETMAR
CHCHD1
NUP54
CHD1L
PRKAB2
TYW3
CRYZ
TMEM260
TAF15
ELOF1
ANKRD13D
WIPF1
HARBI1
ATG13
CNPY3
USP22
CST3
CLN5
TECR
DNAJB1
NANOS1
NHEJ1
RNF125
RMDN2
AKR1B1
CTSC
MFSD4B
PPM1M
RPL39L
SLC14A1
RPL18A
GTPBP3
ANO8
ASNS
KIFBP
HEY1
ZNF101
SPRING1
RNFT2
DGKD
CNOT4
ASNSD1
ASDURF
RASGRF1
NUP153
TNRC6B
SLC41A3
STYXL1
ENTPD6
TNFRSF21
FAM204A
MAP1LC3B2
PJA2
CHKA
ESCO1
API5
ACKR3
IL18RAP
FGF2
KCNJ1
STING1
LACC1
CCDC122
IL10RA
PRDX1
PGS1
COPB1
SGO2
NME1-NME2
NME1
ATAD2B
ITGA4
SLFN13
AMPD3
PSMA3
LAMP3
RAD52
LYRM4
FARS2
ZNF573
CUTC
COX15
GZF1
STAT1
BRAP
ACAD10
ZNF669
MPV17
FRK
BDP1
RBM43
NUDT9
RNGTT
SMARCC2
GALM
STAT3
SLC3A2
ZNF23
SPHK2
RPL18
UBAC1
RUFY3
PSMD9
HPD
PON1
ARID5A
MRPS31
C16orf54
DCT
ZBTB5
LIMS1
AGO3
RBSN
RBM48
PEX1
DNAJC15
CYTH2
CD69
TACO1
MYL12A
PIK3CA
SMG6
RWDD2A
PGM3
H2BC10
ZPR1
SMPD1
NBPF15
POLDIP3
DCAF10
ZNF628
TMEM97
MRPS24
LRRC43
PIH1D2
NKAPD1
STX16
SAC3D1
FAM135A
LY96
CDK12
ACSL1
WASHC2A
CASP8
TICAM1
TTC8
RTF2
UGGT2
ANAPC5
CCNT1
TMEM248
PEAK1
HMG20A
H4C6
NRDE2
TMEM237
EDC4
EEF1AKMT1
NRDC
SFT2D3
SLC29A3
CARMIL1
INTS4
CEP295
ERCC5
DUS1L
TRAK2
STRADB
BRF2
TBC1D22A
NEIL3
NDUFC2-KCTD14
NDUFC2
EVI2A
RPL10A
CDC37L1
PNPO
CORO6
NDUFS5
NINJ1
LAMTOR5
CFAP298-TCP10L
CFAP298
TRAF3IP3
TMEM131
IRAG2
EID2
CCNA2
RASSF2
EIF4ENIF1
DENND4A
SMAD4
PSMC3
BOD1L1
SKI
TRIM38
SNX15
H4C15
H4C14
IMPA1
ZC3H6
TNFRSF10C
MRPL45
ZNF484
MYO16
HIP1R
CTSZ
ABL1
TBCK
AIMP1
NAA16
MTRF1
BTF3L4
C1orf194
CFAP69
GPANK1
CSNK2B
GLIPR1L2
NAGLU
VPS8
CD59
GABPB1
GLRX5
RPL22L1
SRGN
POLR1B
CCL25
TMEM147
RFX7
PLS1
ALG10B
MX2
ANKRD13C
RPL5
SMG1
PPM1A
ZNF875
CRTC2
NOC4L
DDX51
ZNF391
SERF2
ELL3
TXLNB
H2BC11
H2AC11
TIAL1
NOL8
CENPP
ZNF221
COPS7B
USP7
PDE6D
ZSCAN23
LSM5
UTP25
ARHGAP45
DIPK2A
CAAP1
RPTOR
MRPL1
TMEM256
CDK5RAP1
RETSAT
NECAP2
TACC1
SLC39A8
TSR3
GNPTG
SSBP1
CALCOCO1
ARHGAP17
SELENOH
RPS26
IL4I1
USO1
PGBD4
EMC7
RPS29
RTCA
CCDC174
USP15
TMCO1
NOTCH4
CEBPZ
WDR5B
PRADC1
DNAI3
CCT7
DBNDD1
ZNF200
RANBP2
TMEM19
DMAP1
RBIS
UTP23
WDR41
CLIC1
GAN
EYA3
WASHC2C
RUNX3
MICAL1
USP16
WNT5B
ATG4C
PRMT3
CNDP2
GNA13
SYTL3
SYPL1
C1orf127
ZFP69B
RMND5B
TIPARP