ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188634 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◣ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

KRTAP13-4
KRTAP19-3
SPAM1
HHLA2
RALA
HES1
SKAP2
ZBTB22
RUNX3
DBNDD2
TMEM41A
HLA-F
SUN3
MX2
UBA7
KLHL7
NLGN1
RASGEF1C
WFDC10B
MAS1L
PMM1
LTBP2
OR8S1
WAPL
C1QTNF6
CFHR2
OR2F1
OR52A5
FOXD4L1
CLRN1
ABCB8
MAP4
RASGRP3
LIPA
ZNF705G
EPB41L2
CCDC152
KIF6
MGAM2
GAB2
ALDH3A2
OR10J5
SPATS1
C16orf54
CELF6
VIT
VSX1
CHI3L1
PLXNA4
SPDYE4
RAX2
ABR
MRNIP
AMY1C
AMY1B
AMY1A
RASSF8
C1QA
LY9
IL1R1
ST6GAL1
NIT2
CCL3
CCL3L3
CCL3L1
TSHZ2
LGALS12
ACKR2
ZBTB20
MYBL2
HLA-DRA
CUEDC1
PILRB
TSKU
TXNRD2
TCEA3
PRRT3
DRICH1
ZFP91
BCL6
HRG
GM2A
GPR83
RETREG1
LDLRAD4
TMEM9B
SLAMF8
ZNF669
MINPP1
RP9
HEMK1
HOXA3
PAPLN
FOXD4
PMP22
DEFB103B
DEFB103A
PGM5
CYP4F11
TSPO2
ANK1
MINDY4
INCA1
GPR85
ZPLD1
TG
SLC22A10
MYL7
MPO
IMPG1
TNFSF15
AXDND1
NSG2
MYOF
SUN1
METTL16
SLC25A44
RPL29
SYNDIG1L
TUSC2
ZNF3
ZNF165
FIBP
TNFRSF13B
ZNF554
STRIP1
AFDN
SCIN
FIGNL2
CASP2
MYLK
LALBA
NDUFC2-KCTD14
NDUFC2
RPS29
GTF2IRD2B
IER3
SLC37A4
CCR2
ABI3BP
H2BC1
H2AC1
CCN4
LIMS1
GRAMD1C
RPL41
MLN
WDR49
DEFB128
CETN3
BTNL8
SLC17A2
ZMYM1
MED21
SERHL2
NCF2
TMCO4
TMEM45A
TMIGD3
DDX4
VPS72
ADAMTS13
VOPP1
NRXN3
DOK2
GAS7
GBP4
NFIB
HEBP2
MAP3K13
MXI1
PPM1L
RGPD6
KTN1
NOMO2
GRWD1
CTPS1
AJUBA
CACNA1E
PIK3R5
SNAPC1
ZNF761
SERPINB12
TSHB
ZMAT4
NMUR2
TP53AIP1
THNSL2
SULT1C2
SOWAHA
PHACTR1
NEURL3
LRRC7
GOLGA7B
BTNL3
PEMT
SUPT3H
WNT16
ATP2B4
ZNF284
SLC5A10
PABPN1L
PPIAL4F
PPIAL4E
PPIAL4D
CD200R1
TRERF1
PDE1B
POLD2
CDH10
SYNE1
CREB5
IL2RA
TRIM64
REPS2
MORC1
HOXA11
TRIM40
RABGAP1L
RTL6
HSP90AB1
PCBD2
SLC29A1
POLM
DPP10
TIAF1
KRT33A
IQCF3
CDKAL1
TEP1
AGT
ARHGAP45
SRGN
PHC2
OR3A1
EPB41L3
LAMB1
TRIM34
RUVBL1
EEFSEC
IQCF2
SSR3
BMP5
SLC22A12
PRSS38
ANXA13
CYB561
TMEM222
TMEM254
MOCS1
ATP1A4
PRICKLE3
ENTPD5
ZNF875
PAK1IP1
C6orf52
ZBTB40
CTSW
SCARA5
IFI6
ZNF311
SLC26A3
MS4A6E
ARMH2
ARID5A
MOB3A
MAPK7
NOL3
TUT1
ACYP1
LRGUK
RAI14
DCBLD2
ALDH4A1
ERAP2
FLT4
MRPL14
CYRIB
CTNS
S100A2
EFR3B
DYNC2H1
CD48
PPIL2
TCF4
STX18
LGALS14
MX1
ZKSCAN4
ARL4A
TBC1D5
SLC8A3
SDR39U1
SLC9A9
UMODL1
DHRS7
HLCS
RPL17
CAMP
ELOVL5
RTBDN
HROB
PTDSS2
FAM171A2
OR14A2
GSTZ1
NKAPL
BCHE
CTSD
TTBK1
EVA1A
PCDHGA12
CACNG8
STRIT1
MEST
CYP3A4
GRB10
LACRT
SEPTIN4
CCDC188
XIRP2
TULP2
TRIM43B
SLITRK4
PPP4R3C
PLA2G7
PID1
PCDHB15
OR6V1
NPAS2
KLHL14
HYAL4
HGF
GRIA4
CKMT2
CHL1
C6orf118
BCL11A
ASPA
BCKDHB
CNOT6
CCDC181
CORO2B
NTM
FAM187B
H4C4
CLASP1
MKS1
ATAT1
PPOX
MORN1
MALL
LIPM
SPEM3
OR5AP2
NLRP6
RPA2
LIN54
CCSER2
PSMA5
MAST4
TTLL5
RHOXF2B
RHOXF2
PSMD5
CCDC13
TRIM47
DEFB107B
DEFB107A
SLC8A1
HIGD1C
CACNG1
C7orf66
GATAD2B
FAU
AHCTF1
IL1RL1
FBXL20
SEM1
EXOC6
SLC35G5
NOS1
GFAP
TPST1
RWDD2B
PPARD
BPNT1
ENKUR
PDE6G
PNPLA1
RESP18
IL9
C1orf115
RAD54L2
SYNE3
ZMYM6
DNAAF2
ULK2
MLH3
CCDC124
TMEM213
FLNC
SMYD1
KCNMB3
GUCA1B
CLASP2
KIF1B
ZHX3
EPHB6
ZNF765-ZNF761
ZNF765
C1orf100
SLC15A2
TEX45
MBD3L1
DEF8
CREM
DDX50
RPP40
LGALSL
SLU7
CRHR2
ENGASE
DPPA2
DMRTC1
C4orf19
MEF2C
SS18L2
MACO1
NQO2
H3Y2
CNTN6
SNAP91
SLC39A12
MYMX
DPH3P1
BCAR3
MIA3
SAFB
KIAA0895
RTP4
PGM2L1
ARHGAP23
CYP11A1
UTS2
TMEM211
PRAMEF2
NR1I3
CYP2B6
CLIC1
LYST
GPN3
FAM216A
NELFCD
IL22RA2
ASZ1
KRT39
IL36B
GAS2L1
RNF24
SOX6
HNRNPF
KIAA0513
TP53
USP25
PIK3C3
FKBP4
CRNN
SGK2
MARCHF10
GALR3
SUGCT
FGFBP3
TTC26
FBXL3
CAST
PRR30
SLC3A2
SEPTIN9
TRAF4
METTL15
KIF18A
MPLKIP
ARHGAP24
ARHGAP29
ENO3
ECT2
RIPOR2
ZHX1
CCND3
BCAP29
ARPC5
RNF14
SLC4A2
DIS3L2
STARD3NL
CASKIN2
SLC11A2
ACBD4
CCDC69
QTRT2
CCDC191
SYNJ2
PLCD3
MAPK9
H3C1
DYRK4
RPS6KA2
YAP1
SOCS5
PIFO
SLC25A22
MXD4
KIF23
TMEM150A
SFT2D2
FLI1
PTPN7
XAF1
NUGGC
WNT5A
LAPTM4B
RNF20
KLHL10
GIMAP5
SPEF2
ALLC
EYA1
PKD1L1
OR5F1
MTRR
FASTKD3
RRAS
NPIPA8
STOX1
ISLR
MAP2K4
KRTAP9-1
GBP1
LCE6A
C20orf202
AKR1E2
ZNF98
VEPH1
TRMT9B
TMEM52B
TMEM184A
TDRD5
SPOCK2
SLCO1A2
SFTPD
RGS7BP
RDH5
PSG6
PRSS8
PRAMEF1
PEG3
PCP4L1
PCDHGA8
PALM3
OSMR
OR52H1
OR51I2
OR4N2
NWD2
NBPF9
MS4A10
MROH9
MED12L
LHX1
KIF4B
IL17B
HNRNPCL1
EN1
DPH2
COL11A1
CLDN20
CFHR5
CDH19
CAMK2A
C5orf46
BEST3
BCO1
APOH
ANGPT2
BROX
ZMAT3
ARCN1
RAD9A
SDHA
CCDC127
GSTM4
JAM2
KLK15
NXF2B
NXF2
NOVA1
GPR182
BNIP1
C16orf95
GALNT11
ARHGEF10L
IL33
VSTM1
UBTFL1
SLC34A1
SCGB1D4
REG1A
OR6C75
NPHS1
LRRTM1
IDI2
CTNNA2
CSRNP1
C1orf158
EIF3CL
EIF3C
TAGAP
SLC25A40
LIN52
UFC1
ALDH6A1
NFXL1
NXPE1
DEFB1
IFNL1
TAC4
MATN3
CCDC105
DAZAP2
SEMA4F
MS4A12
OR4X2
FGD1
CYP3A7-CYP3A51P
CYP3A7
CPLX2
CABP5
AMZ1
EVI5
NPIPB2
RCC1
GPBP1
PHF21A
BANP
RPP21
KDM4A
TXNDC12
NUP42
GNA12
NT5M
RASA4
MACROD2
MTIF2
TRIM26
HMGCR
EIPR1
ID2
CSRP1
MTREX
DHX29
TENM2
RCAN3
UBE2C
CES3
FASLG
DDB2
TRPV5
CARNS1
B3GALT5
DDI2
C10orf95
PPARGC1A
PRR13
CCDC61
ATP13A2
C21orf58
OR2A14
CLDN10
OR1E2
TRIM39-RPP21
SLC7A9
PTPN4
BTBD9
NMI
RHEX
TMCC2
PPARGC1B
ST3GAL6
UBXN2A
PCNX2
CD200
SLC2A2
THSD4
MEI1
PPIAL4A
HCRT
GALNT15
BCAS1
C16orf72
DARS2
CENPL
HEATR1
MMP24OS
MMP24-AS1-EDEM2
PFKP
NEK2
ZNF525
PRAMEF26
PRAMEF25
IL4I1
TMEM260
MIF4GD
SLC19A1
LOXL1
ESRRG
NODAL
TMEM200A
GCNA
CD1A
IRF8
IFIT3
ANKS1A
ZNF705B
PTPRF
FBXL2
BRINP3
NPM1
CYB5B
MAPRE1
SEC22A
CRTAP
TRAK1
UBE2T
CD80
OR5D13
EFEMP1
PGPEP1L
CYP17A1
CRISP3
MAPK8IP3
TMCO6
CCDC167
OR2V2
OR10AD1
MUCL3
CD3D
RUNX1
IL16
SLC35D1
ALOX5AP
ABCC11
COQ2
PTGES2
MANBAL
DALRD3
UTP25
CDH17
DNAJC5B
MEPCE
WDR75
TMEM14C
FOXP1
DGKZ
ST3GAL4
TMEM182
MAP3K7
ATP13A3
SH2B2
KLF7
USP47
SMC5
CLPTM1
VEZT
FGD6
ZNF184
TLR9
CMPK1
ZCWPW1
ZNF608
NFKBIL1
GNGT2
ATP6V1G2
FH
INPP5F
TMED3
GPATCH3
RRNAD1
ISG20L2
ZNF620
SAR1A
CEACAM19
ULBP1
RAPGEF2
PRAME
SCN2A
MAPRE3
SRI
TMPRSS13
IFT43
TRIM50
SERPINB2
LGR6
KRT18
PDE7B
ZNF423
TRDN
PLSCR5
KRTAP5-11
CA4
AKAIN1
ACSM6
RNASE10
NTRK3
ZIC1
VSIG10L2
UGT1A8
TTLL2
SSX4B
SSX4
SMIM10L2B
SLC30A3
RIMS1
RAP1A
RAET1G
PSG11
PHACTR3
PDE3A
PCP4
PARVA
OR52E2
NOVA2
NEUROD6
MYMK
MYH1
MCF2
LRMDA
KRTAP4-8
KCNIP1
ITPRIPL2
GUCA1ANB
GUCA1A
GJA8
EPHB2
DNAJC5G
DLX6
CREB1
CEACAM20
CCDC183
CASP1
CAPN3
CACNB2
C3orf85
APLNR
ANKDD1B
ALKAL2
ACVR1C
RARA
NUP188
DOLK
PLAAT2
SYNRG
SUPT6H
SDF2
PHTF1
RBBP8
AP3M2
SERPINB6
MMP27
MCCD1
PLIN5
GUCA1C
RFESD
LENG8
POLR2J
ZNF394
GIMAP6
CCDC182
MARCHF8
NCK1
LPCAT3
SHC1
RNF8
MIB2
CELA2A
SEC31B
TEX19
CATIP
SLCO6A1
LRRC74A
CMYA5
ANXA11
C9orf16
GTF2H5
RGPD1
ZBED8
PSMF1
C12orf71
FAAP20
ARHGEF35
CA6
PRSS33
PLA2G10
FUT1
FAM178B
ADAP1
TENT4B
SPAG9
STYXL1
IL1RAP
SEC62
ZP1
SPDYE16
PROS1
PKLR
MOSMO
SLX4IP
GLT8D2
CHCHD2
ORAI2
CCL25
NCKAP1L
PRLR
MUC20
SPATA12
PLPPR1
PPCDC
UPK3BL2
FXR2
MLST8
SRPRB
B4GALT4
SFTPB
EHHADH
DNAJC4
KRTAP20-4
OR52B6
TMEM150C
SPDYE7P
RANBP17
NAT16
H3-4
CDC14B
KLHL12
FKBPL
PRADC1
PGRMC2
PPP1R15B
H2BC17
H2AC17
TRIM27
STPG1
NIPAL3
FAM153B
SLC44A2
HSPG2
EOMES
SLC9A3
RFPL3
POU5F1
ZBTB38
NMD3
PFDN4
AP2M1
NEK7
AKAP1
LRRN3
GAL3ST4
TLDC2
CCDC117
LPXN
MPPE1
TXNDC11
TSEN34
CDKL1
CASS4
DTNB
MOGAT3
KLF1
DDX43
CDC42EP1
TPD52L2
AMPD3
BBS2
RPL19
UGP2
R3HDM2
TTC28
FDFT1
HAUS2
ELP6
TMEM220
TRH
VCX
LY6G6F-LY6G6D
LY6G6F
FAM209B
DEFA5
CDHR4
UPP1