ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1393087 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◣ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

NKIRAS1
NR1D2
TEF
AGAP11
ADIRF
PER2
PER3
DBP
NR1D1
PER1
CPEB1
CRY2
BHLHE40
FRG2
FRG2C
MTRNR2L1
COL23A1
LAMP1
ANKRD12
RALGDS
KLF11
GET4
NPTN
MTHFD1L
EIF5A2
PIK3IP1
NR6A1
FAM214B
CRY1
CIART
PLD6
KAT5
MARCHF9
CDK4
CLUAP1
C16orf90
TRAPPC6A
BLOC1S3
RORC
PIP4P1
SNRPE
BCAR1
NOL8
CENPP
RAD9A
OSGIN1
SLC35A5
ATG3
PFDN4
YPEL5
TMEM116
ERP29
COMMD8
LRRC56
HRAS
PTBP1
KHDRBS1
BCAS3
MAPK6
DUX4
PLEKHF2
CLN6
RNF43
DOCK6
IGSF8
HPS5
GTF2H1
CLCN7
HOXC13
TXNIP
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
DDX5
GTF3A
ELAVL3
ERCC6L2
TRPV4
OSGEP
APEX1
MTHFR
CLCN6
ZNF292
STX4
AVPI1
UVRAG
SLC20A1
ARRDC4
ARFGEF2
VPS11
USP32
UBE2B
CDKL3
EMC2
VPS26A
MAP2K7
ISOC2
RNASEK
C17orf49
HIF1A
P2RX2
LRCOL1
AP5Z1
SPG21
DAZAP2
CRYAA2
CRYAA
MAP1LC3B
FBXO31
ILF3
FIBP
CCDC85B
CDK12
DDX42
CCDC47
PLEKHG5
ZNF595
WASHC2A
PTEN
KLLN
PPP1R3C
S100A13
CHTOP
RHOF
HES4
FNIP1
NPR3
SNRPA
C19orf54
DENR
APPBP2
PC
LRATD2
PHKG2
SERF2
INAFM1
KMT2E
MICALL2
CAMKK1
TRAPPC2L
GALNS
PPM1D
AP1S1
RPEL1
UBAP2L
C1orf43
PNPLA7
MRPL41
MRPL40
HIRA
PMS2
AIMP2
G3BP1
RFESD
EIF3B
SLC33A1
SLC25A13
RPUSD4
FAM118B
NUDCD3
WASHC2C
FAM117B
ZNRF2
CEBPB
ZNF331
CREBRF
MORF4L1
IFRD2
TNNI3
ALG13
CCDC24
PRDX6
SRP54
UTP18
MBTD1
CEP63
ANAPC13
NCOA3
SLC35B2
SPNS1
WDR62
THAP8
PRORP
PPP2R3C
GMFB
EPC1
BCAM
MAPK1IP1L
TMEM185B
B3GNTL1
NME1-NME2
NME1
BRIP1
PRKAR1A
TIMM22
GTPBP6
SDR39U1
ZNF438
PLEC
HBP1
DPP3
SRSF1
LSM12
G6PC3
GTF2A1
ZNF263
RRAGC
KDM6B
TRMO
ATP6V1H
TRIQK
ADNP2
RCCD1
NFX1
XPOT
CSTF1
AURKA
COQ10B
HMGB2
GYG1
GSK3B
TOB1
HERC3
SLC25A36
TKTL1
TEX28
SRSF5
GABARAPL2
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
TTYH1
FLCN
CHFR
TMEM18
CLTC
USP36
GBE1
PSMD5
CCDC116
PPP1R3D
IP6K1
FAM217B
LYRM9
KLF1
GCDH
TUBD1
RPS6KB1
ZMYND8
LRFN4
FAM214A
TCF25
TPD52L2
ABHD16B
UBE2Q1
C2CD4D
CCNL1
DACT3
SYNGAP1
CUTA
ARRDC3
ZBTB37
BCAS4
RAB17
MEA1
KLHDC3
SPATA25
NEURL2
CTSA
YBX2
DHPS
ZNF706
PDE12
PTCD3
POLR1A
GZF1
UCKL1
SRCAP
LOC730183
PUM2
CTTN
SENP8
MYO9A
NAPRT
MROH6
COX14
EPM2A
SNAP29
PI4KA
NRAS
SCAF11
CLN3
APOBR
SEPTIN2
HDLBP
MADD
RMND1
ARMT1
THAP5
DNAJB9
NTN5
PAF1
THNSL1
SUMF1
KDM4C
NBN
GGA2
RNF13
MARCHF8
COL6A1
STAT6
ZNF687
ZC3H4
SLC2A4RG
LIME1
EIF1
HNRNPF
NAA50
EED
ATP6V1A
DPH2
B4GALT2
ATP6V0B
RMI1
HNRNPK
FZD1
BCLAF1
SPTBN4
BLVRB
TMEM187
HCFC1
PPAT
PAICS
POLI
MYL12A
RPS11
TM9SF1
HEXA
TBC1D17
CENPN
AKT1S1
ZZZ3
RRAGB
SLC25A39
COMMD9
EIF4B
PPFIA4
H2BC12
H2AC12
OPRL1
HSF2
MVB12A
PSMD6
SPAAR
NTMT1
TBCEL-TECTA
TBCEL
MAMDC2
MTCH2
CNOT3
NFYC
CNNM2
UCP2
ARIH1
CHMP2B
EPB41L4B
CD164
UNC13D
MAN2B2
SULF2
MED13
PNO1
SLC35C2
RFX3
SETD1A
MRPS23
UNK
ZCWPW1
MEPCE
LFNG
SLC49A4
HSPBAP1
SLC25A26
PARD6B
DHX40
RIMBP2
NOP14
GRK4
BRPF1
WTAP
SOD2
TMEM141
FNBP4
CCDC183
SLC3A2
DGAT2
SNX5
MGME1
SLC25A25
NAIF1
CDIPT
LAMC1
C6orf62
TENT5B
ATG101
YEATS4
ISG20
HNRNPA2B1
CBX3
ZNF335
SRP9
CASC3
MCM7
LKAAEAR1
BAX
AP4M1
TIPARP
EXOSC5
BCKDHA
RNF223
TRIM8
DHODH
HNRNPH2
LCN12
LARP1
HDAC4
CFAP251
C8G
RPSA
PRKCI
GABPB2
TRIB1
EIF4A1
COLEC11
CAP1
ESYT3
RBBP5
MAPK15
MTRNR2L8
ITGB1
CCDC107
PPP4R3B
CLN8
TUBA1B
ILVBL
GALR1
VPS33A
PDXDC1
MAL2
SLC35A4
POLR1D
LNX2
KAT7
APBB3
SULT1A4
SULT1A3
ZFP91
LPXN
CENPA
H4C15
H4C14
ENSA
TCERG1
CLK1
CD55
ADK
TUBA1C
GREB1
ZHX2
TMEM53
SYNCRIP
ARMH1
DDX3X
MOCS3
MAX
DPM1
PHF23
BOLA2
CTDSP2
SREK1
ERCC1
RAD50
KLHL12
STXBP4
COX11
EMP3
CCDC114
RNF139
RBBP6
YARS1
S100PBP
NAPA
ZBTB7B
MMADHC
MZF1
WDR89
YWHAZ
ADGRB1
ZFP1
SLC43A2
TBX2
PCBP1
DDX59
TRIP6
TBC1D13
SKA2
PRR11
SPPL3
VMP1
PTRH2
NR1H2
TADA3
ARPC4-TTLL3
ARPC4
SLC39A6
IGSF21
CD2BP2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
RPS29
EIF4G1
SCAF1
RRAS
PPM1A
CIPC
INO80
EIF5
TMCC1
FBXO46
PPP1R13L
POLR1G
SLC25A11
RNF167
HEXIM2
EIF4A2
DLX4
ECH1
SPATA2
PRC1
TUFT1
PEX14
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
PDP2
STAM2
RNMT
FAM210A
COPS7A
TJP2
STMN1
BCL6
PIGO
NDUFS6
MRPL36
MLH1
EPM2AIP1
HES1
KPNA2
TBC1D15
SLX1B
SLX1A
BOLA2B
TSTD2
NCBP1
SGO1
AMDHD2
UBR5
SMARCD2
PCBP3
ZNF219
TMEM253
PDCD6IP
CDK19
AMD1
PTP4A1
MIOX
ADM2
SPAG9
ASPH
GART
DDX43
ZNF778
PPIA
GLS
STX6
BCAS1
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
FAM53C
CDC25C
COX19
SLBP
TRMT112
PRDX5
NPM1
USP9X
H3-3B
TRIM59
CSRNP1
ATOH8
PACSIN3
ANAPC7
SLC25A19
PIGW
MYO19
EIF3E
TATDN2
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
SLC35F6
CHKA
KLF10
RBM3
PPP2R5C
PABPC1
ZFP62
USP48
MTDH
FBXL18
RNFT1
PSME3
MED26
RTN4RL1
DPH1
NAMPT
AEN
JUNB
FBXO33
TUBGCP5
FBXW4
DNAJB1
PAK1IP1
LAMTOR4
C6orf52
TRA2A
ADGRE5
OSGIN2
TMEM88
NAA38
HNRNPC
CYB5D1
ATF7-NPFF
ATF7
SEPTIN9
RIPK2
UQCRC2
ALDOA
PCNT
C21orf58
AP1G1
SIRT4
CACYBP
PRMT2
MCCC1
IREB2
DDX23
PCIF1
STX16
ERGIC2
DEF6
LRCH4
FBXO24
CYTH2
GCLC
BOLA2-SMG1P6
TMED10
DCBLD1
ZNF217
CCDC86
TFAP4
POLR2J3
WDR6
PES1
ARL4A
FCMR
ZNF384
WDR74
MTRNR2L2
MSH3
DHFR
FAF1
MYL6
U2AF2
PLEKHG2
PARP10
BCL9L
SRRT
SPTSSB
LTV1
SMG9
SERINC3
PMVK
PGP
BRICD5
RNF31
PSME2
FAF2
ARF6
SLC12A4
HSPH1
SETDB1
PHF12
HSF1
BOP1
DUSP1
PPP1R15A
PLEKHA4
SLC35B1
MBNL1
GOLIM4
OGFOD2
ARL6IP4
TANC2
DARS1
TRA2B
TOP3A
SMCR8
TFAP2C
KIFC1
TAGLN2
TEX14
RAD51C
PSMC5
FTSJ3
KHSRP
STK35
CHMP3
USP17L22
USP17L20
GMNN
CYC1
BANP
TMEM114
HNRNPD
MXD3
AHI1
TREX1
MICU1
CAD
TIPIN
KIAA0895
DNAJB5
ANLN
PIK3R3
CCDC186
RITA1
OSBPL1A
DDX54
KPNA3
SRSF4
RRP9
PARP3
CCDC6
LAMTOR1
YIF1A
TMEM151A
SPATA17
NOP58
HNRNPH1
GPATCH2
METTL23
MEF2D
JMJD6
ELOB
C1orf54
APH1A
TIMM44
ZNF24
SOCS5
PNISR
DUS3L
ZNHIT1
PLOD3
METTL1
EEF1AKMT3
CYP27B1
ZFP36
DNAJB12
TSPAN31
NPC1
AGAP2
NCAPD2
MRPL51
DVL2
RABGGTA
PNPO
EGR1
DOK7
PPIL3
NIF3L1
RPS19
MRPS18B
SYNRG
RHOD
TMEM251
MOAP1
GNAS
DDX6
AIG1
PPP1R15B
JADE2
CIC
SLC25A10
PAIP2
SERTAD3
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TET3
SENP2
HNRNPA0
C17orf58
ZAR1L
FAM86B1
BRCA2
WDR97
TMEM184A
NUP188
MAF1
DYNC2I2
DOLK
CC2D1B
SUPV3L1
SF3B4
CANX
COPS3
BRD2
TOR1AIP2
TOR1AIP1
ZC3H11A
ZBED6
SESN1
IQSEC1
DDTL
DDT
DDIT4
CEP57L1
SPATC1L
SARAF
CREBZF
ALOXE3
RPL27
MED1
CHD1
SGK3
NAB2
KRT80
KMT5C
LRPPRC
GOLGA5
SAE1
SOX12
PARN
LYRM1
DCUN1D3
DCLRE1B
BFAR
AP4B1
IRF2BPL
HIPK1
PPP5D1
PDPR
CALM3
GABPB1
SLC35E2A
LIN54
TXNRD1
TAX1BP3
EMC6
SERPINE1
MDM2
LDHA
PDIA4
GPRC5A
TSPAN4
RSRP1
POLR2L
GNB2
C3orf14
FMC1-LUC7L2
FMC1
TBL1X
SYT1
UBE2M
ESRP2
CHMP2A
AMOTL2
SMC4
IFT80
ARF3
ZNF57
OR2B11
NCL
CBLL1
ZBTB8OS
RBBP4
ORC4
MBD5
DUSP7
NOCT
NAT10
DOP1B
ZNF286A
SLC30A1
C15orf39
PLK4
CFLAR
PMEPA1
RBM8A
NQO1
RPL10
TOR3A
PRKAG2
ETF1
TSPYL1
NOL11
DSE
GRHL2
C1orf174
ATP5MC1
UBE2T
C5orf51
C14orf93
GSTP1
TFDP1
STAG2
LINGO1
MBTPS1
CEP152
UBC
UBALD1
MAT2A
TAF9
RAD17
LRP10
ATP6V1G1
AK6
ANKFY1
PPP4R3A
PKNOX1
ITPRID2
GNA13
DUSP28
ANKMY1
SCN5A
MTMR14
BAHCC1
AXDND1
TIGD5
LONP1
EEF1D
CATSPERD
SRSF7
RSL1D1
DMTF1
TNPO2
ZBTB21
PPP2CA
CD37
KIF22
GABPA
FUBP1
DNAJB4
ATP5PF
FANCC
RBM15
NCBP2AS2
NCBP2
ZBTB10
FZD5
WDR81
BMP7
ST20-MTHFS
POP7
H3C15
H3C14
H2AC19
H2AC18
TYW1